BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003939
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634397.1| PREDICTED: putative transcription elongation...   106   2e-21
ref|XP_002265283.2| PREDICTED: putative transcription elongation...   106   2e-21
emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]   105   3e-21
ref|XP_002313759.1| global transcription factor group [Populus t...   104   6e-21
ref|XP_004162900.1| PREDICTED: putative transcription elongation...   102   4e-20

>ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 2 [Vitis vinifera]
          Length = 1044

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 18/104 (17%)
 Frame = -2

Query: 337  DNKKKGHPDSRGTIT-QYVPENS-SRTYEAPTQGAGWANTSSGNHIEAGTPRDGSPAYAN 164
            DN ++G+PDS  T + QY P +  SRTYEAPT G+GWA+T  GN+ EAGTPRD +PAYAN
Sbjct: 826  DNWEEGNPDSWVTTSPQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRDSTPAYAN 885

Query: 163  VPSP*LPSTPGGQPLT----------------TEAVGLDMMSPV 80
            VPSP LPSTPGGQP+T                T   G+D+MSP+
Sbjct: 886  VPSPYLPSTPGGQPMTPNSVSYLPGTPGGQPMTPGTGVDVMSPI 929


>ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
            1-like isoform 1 [Vitis vinifera]
            gi|302142757|emb|CBI19960.3| unnamed protein product
            [Vitis vinifera]
          Length = 1034

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 18/104 (17%)
 Frame = -2

Query: 337  DNKKKGHPDSRGTIT-QYVPENS-SRTYEAPTQGAGWANTSSGNHIEAGTPRDGSPAYAN 164
            DN ++G+PDS  T + QY P +  SRTYEAPT G+GWA+T  GN+ EAGTPRD +PAYAN
Sbjct: 816  DNWEEGNPDSWVTTSPQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRDSTPAYAN 875

Query: 163  VPSP*LPSTPGGQPLT----------------TEAVGLDMMSPV 80
            VPSP LPSTPGGQP+T                T   G+D+MSP+
Sbjct: 876  VPSPYLPSTPGGQPMTPNSVSYLPGTPGGQPMTPGTGVDVMSPI 919


>emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
          Length = 1107

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/104 (54%), Positives = 69/104 (66%), Gaps = 18/104 (17%)
 Frame = -2

Query: 337  DNKKKGHPDSR-GTITQYVPENS-SRTYEAPTQGAGWANTSSGNHIEAGTPRDGSPAYAN 164
            DN ++G+PDS   T  QY P +  SRTYEAPT G+GWA+T  GN+ EAGTPRD +PAYAN
Sbjct: 825  DNWEEGNPDSWVXTSPQYQPGSPPSRTYEAPTPGSGWASTPGGNYSEAGTPRDSTPAYAN 884

Query: 163  VPSP*LPSTPGGQPLT----------------TEAVGLDMMSPV 80
            VPSP LPSTPGGQP+T                T   G+D+MSP+
Sbjct: 885  VPSPYLPSTPGGQPMTPNSVSYLPGTPGGQPMTPGTGVDVMSPI 928


>ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
            gi|222850167|gb|EEE87714.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1042

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/104 (54%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
 Frame = -2

Query: 337  DNKKKGHPDSRGTITQYVPENS-SRTYEAPTQGAGWANTSSGNHIEAGTPRDGSPAYANV 161
            DN + G+P S GT  QY P +  S TYEAPT G+GWA+T  GN+ EAGTPRD S AYAN 
Sbjct: 823  DNWEDGNPGSWGTSPQYQPGSPPSGTYEAPTPGSGWASTPGGNYSEAGTPRDSSSAYANA 882

Query: 160  PSP*LPSTPGGQPLTTEAV-----------------GLDMMSPV 80
            PSP LPSTPGGQP+T  +                  GLDMMSPV
Sbjct: 883  PSPYLPSTPGGQPMTPSSASYLPGTPGGQLMTPGTNGLDMMSPV 926


>ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 849

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/104 (51%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
 Frame = -2

Query: 337 DNKKKGHPDSRGTITQYVPENS-SRTYEAPTQGAGWANTSSGNHIEAGTPRDGSPAYANV 161
           DN ++G+P + G   QY P +  SRTYEAPT G+GWANT  G++ +AGTPRD   AYAN 
Sbjct: 630 DNWEEGNPATWGASPQYQPGSPPSRTYEAPTPGSGWANTPGGSYSDAGTPRDSGSAYANA 689

Query: 160 PSP*LPSTPGGQPLTTEAV-----------------GLDMMSPV 80
           PSP LPSTPGGQP+T  +                  GLDMMSPV
Sbjct: 690 PSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDMMSPV 733