BLASTX nr result

ID: Bupleurum21_contig00003938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003938
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271958.2| PREDICTED: uncharacterized protein LOC100263...   187   6e-45
ref|XP_002327696.1| predicted protein [Populus trichocarpa] gi|2...   185   2e-44
gb|AFY26885.1| zinc finger protein [Morella rubra]                    184   3e-44
gb|ABU45196.1| unknown [Petunia integrifolia subsp. inflata]          183   7e-44
emb|CBI17550.3| unnamed protein product [Vitis vinifera]              172   2e-40

>ref|XP_002271958.2| PREDICTED: uncharacterized protein LOC100263342 isoform 2 [Vitis
            vinifera]
          Length = 506

 Score =  187 bits (474), Expect = 6e-45
 Identities = 129/283 (45%), Positives = 155/283 (54%), Gaps = 7/283 (2%)
 Frame = -1

Query: 1244 PPPSVPTSSAEISLVLPDQTPGLQENSISNSTQIMDDTPTPVQVAGLVGXXXXXXXXXXX 1065
            P P+V  S+A IS VLP Q+P L EN     TQI+++ P      GL             
Sbjct: 230  PAPAVAPSTAVISAVLPIQSPELPENP----TQILEEAPPAA--TGLNASCSSSTSSSSN 283

Query: 1064 XXXXSTVFASLFASSTASGSMQS-RTTGFTDYVQATAQADPILDLRTSLSIEPTSLCLAT 888
                S+ FASLF SSTAS S+Q  + TGF+   +   + D   +L  S S EP SLCL+T
Sbjct: 284  GTTSSSAFASLFVSSTASASLQQPQATGFSGLSRVMTRPDRPTELTPSSSTEPISLCLST 343

Query: 887  NHGSSIFGTAGQERRRYALPPQPAMSATALLQKAAQMSAAPTNAXXXXXXXXXXXSTYSA 708
            NHGSSIFGTAGQERR+YA PPQPAMSATALLQKAAQM AA TNA           ST S+
Sbjct: 344  NHGSSIFGTAGQERRQYAPPPQPAMSATALLQKAAQMGAAATNA-SLLRGFGIVSSTSSS 402

Query: 707  GQQ---QWNTHQVDXXXXXXXXXXXXXXXXXXXXGFKELMMGTPSVFDPKHXXXXXXXXX 537
            GQQ   QWN  Q++                    G KELMMGTPS+F PK          
Sbjct: 403  GQQENLQWNRQQMEPESTSVAAGLGLGLPCDEGSGLKELMMGTPSLFGPKQTTLDLLGLG 462

Query: 536  XXXXXXXXXXLSALMTSIGGGLN---AATSFDNAEFSGEEYGR 417
                      LSAL+TSIGGGL+   AA ++   EF+G++ GR
Sbjct: 463  MAASGSPSGGLSALITSIGGGLDVAAAAATYRGGEFAGKDMGR 505


>ref|XP_002327696.1| predicted protein [Populus trichocarpa] gi|222836781|gb|EEE75174.1|
            predicted protein [Populus trichocarpa]
          Length = 505

 Score =  185 bits (470), Expect = 2e-44
 Identities = 131/287 (45%), Positives = 151/287 (52%), Gaps = 11/287 (3%)
 Frame = -1

Query: 1241 PPSVPTSSAEISLVLPDQTPGLQENSISNSTQIMDDTPT----PVQV-AGLVGXXXXXXX 1077
            PP  P        V PD  P L +N     TQI+++ P     P  V AG  G       
Sbjct: 227  PPPAPLPPP----VAPDLGPELPDNP----TQIIEEAPARAPMPATVTAGFNGSCSSSTS 278

Query: 1076 XXXXXXXXSTVFASLFASSTASGSMQS-RTTGFTDYVQATAQADPILDLRTSLSIEPTSL 900
                    S+VFASLFASSTASGS+Q+ +T  FTD + A A  D   DL  S S EP SL
Sbjct: 279  SSSNGSSTSSVFASLFASSTASGSLQTPQTPAFTDLIHAMAHPDRPTDLAPSSSAEPISL 338

Query: 899  CLATNHGSSIFGTAGQERRRYALPPQPAMSATALLQKAAQMSAAPTNAXXXXXXXXXXXS 720
            CL+TNHGSSIFGTAGQERR+YA PPQPA+SATALLQKAAQM AA TNA           S
Sbjct: 339  CLSTNHGSSIFGTAGQERRQYAPPPQPAISATALLQKAAQMGAAATNASLLRGLGIVSSS 398

Query: 719  TYSAGQQ--QWNTHQVDXXXXXXXXXXXXXXXXXXXXGFKELMMGTPSVFDPKHXXXXXX 546
              S  Q   QW   Q++                    G  ELMMGTPS+F PKH      
Sbjct: 399  PSSTQQDNTQWGHRQMEPENASLAAGLGLGLPCDGGSGLNELMMGTPSIFGPKHATLDFL 458

Query: 545  XXXXXXXXXXXXXLSALMTSIGGGLN---AATSFDNAEFSGEEYGRN 414
                         LSAL+TSIGGGL+   AA SF   EFSG++ GR+
Sbjct: 459  ELGMAAGGNPSGGLSALITSIGGGLDVAAAAASFGGGEFSGKDMGRS 505


>gb|AFY26885.1| zinc finger protein [Morella rubra]
          Length = 514

 Score =  184 bits (468), Expect = 3e-44
 Identities = 130/287 (45%), Positives = 154/287 (53%), Gaps = 10/287 (3%)
 Frame = -1

Query: 1241 PPSVPTSSAEISLVLPDQTPGLQENSISNSTQIMDDTPTPVQVAGLVGXXXXXXXXXXXX 1062
            PP+ P  +  +S VLP++ P L EN      QI+++ P      GL G            
Sbjct: 237  PPAPPRPTGVMSSVLPNKNPELPENP----PQILEEAPA---TTGLNGSCSSTTSSSGNG 289

Query: 1061 XXXSTVFASLFASSTASGSMQS-RTTGFTDYVQATAQADPILDLRTSLSIEPTSLCLATN 885
                +VFASLFASSTAS SMQ+ +T  FTD ++A A  DP  DL    S E  SLCL+TN
Sbjct: 290  STSCSVFASLFASSTASASMQTPQTPAFTDLIRAMAPPDPPTDLARPSSTESISLCLSTN 349

Query: 884  HGSSIFGTAGQERRRYALPPQPAMSATALLQKAAQMSAAPTNAXXXXXXXXXXXSTYSAG 705
             GSS+FG AGQERR+Y  PPQPAMSATALLQKAAQM AA TNA           ST S+G
Sbjct: 350  PGSSMFGNAGQERRQYTAPPQPAMSATALLQKAAQMGAAATNA-SFLRGFGIVSSTSSSG 408

Query: 704  QQ---QWNTHQVDXXXXXXXXXXXXXXXXXXXXGFKELMMGTPSVFDPKHXXXXXXXXXX 534
            QQ    W+  QV+                    G KELMMGTPSVF PK           
Sbjct: 409  QQDGLHWSQRQVE-PENSSVAAGLGLGHCDGGSGLKELMMGTPSVFGPKQTTLDFLGLGM 467

Query: 533  XXXXXXXXXLSALMTSIGGGLN------AATSFDNAEFSGEEYGRNS 411
                     LSAL+TSIG GL+      AA S+  AEFSG++ GRNS
Sbjct: 468  AAGGSPSSGLSALITSIGSGLDVAAAAAAAASYGGAEFSGKDIGRNS 514


>gb|ABU45196.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 525

 Score =  183 bits (465), Expect = 7e-44
 Identities = 124/282 (43%), Positives = 154/282 (54%), Gaps = 5/282 (1%)
 Frame = -1

Query: 1241 PPSVPTSSAEISLVLPDQTPGLQENSISNST-----QIMDDTPTPVQVAGLVGXXXXXXX 1077
            P SVP S+A IS V P Q P L+E+S ++S       +M++T   V    L G       
Sbjct: 249  PASVPPSTAVISFVSPVQNPELRESSNTDSAGTGTNHVMEETAALVS---LTGSCSSSSN 305

Query: 1076 XXXXXXXXSTVFASLFASSTASGSMQSRTTGFTDYVQATAQADPILDLRTSLSIEPTSLC 897
                    S+VF S+FASSTASGSM S+  GFT   QA A  D + ++    S EP SLC
Sbjct: 306  SCSNGSTSSSVFGSVFASSTASGSMPSQAPGFTGLFQAMAP-DRVAEMAPPSSTEPISLC 364

Query: 896  LATNHGSSIFGTAGQERRRYALPPQPAMSATALLQKAAQMSAAPTNAXXXXXXXXXXXST 717
            LA + GSSIF  AGQERR+YA  PQPAMSATALLQKAAQM AA T++           ++
Sbjct: 365  LAMSQGSSIFRPAGQERRQYAPAPQPAMSATALLQKAAQMGAAATSSSLLRGFGVMSSTS 424

Query: 716  YSAGQQQWNTHQVDXXXXXXXXXXXXXXXXXXXXGFKELMMGTPSVFDPKHXXXXXXXXX 537
             S GQQ+WN   +D                    G KELM+GTPSVF PKH         
Sbjct: 425  SSHGQQEWNGRPLDPDGASLAAGLGLGLPCDAGSGLKELMLGTPSVFGPKHPTLDLLGLG 484

Query: 536  XXXXXXXXXXLSALMTSIGGGLNAATSFDNAEFSGEEYGRNS 411
                      LSAL+TS+G  L+ A SF +A+FSG++ GRNS
Sbjct: 485  MAANGGPSPGLSALITSMGSNLDMA-SFGSADFSGKDLGRNS 525


>emb|CBI17550.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  172 bits (435), Expect = 2e-40
 Identities = 121/285 (42%), Positives = 147/285 (51%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1244 PPPSVPTSSAEISLVLPDQTPGLQENSISNSTQIMDDTPTPVQVAGLVGXXXXXXXXXXX 1065
            P P+V  S+A IS VLP Q+P L EN     TQI+++ P                     
Sbjct: 230  PAPAVAPSTAVISAVLPIQSPELPENP----TQILEEAPPAA------------------ 267

Query: 1064 XXXXSTVFASLFASSTASGSMQSRTTGFTDYVQATAQADPILDLRTSLSIEPTSLCLATN 885
                      L AS ++S S  S  TGF+   +   + D   +L  S S EP SLCL+TN
Sbjct: 268  --------TGLNASCSSSTSSSSNATGFSGLSRVMTRPDRPTELTPSSSTEPISLCLSTN 319

Query: 884  HGSSIFGTAGQERRRYALPPQPAMSATALLQKAAQMSAAPTNAXXXXXXXXXXXSTYSAG 705
            HGSSIFGTAGQERR+YA PPQPAMSATALLQKAAQM AA TNA           ST S+G
Sbjct: 320  HGSSIFGTAGQERRQYAPPPQPAMSATALLQKAAQMGAAATNA-SLLRGFGIVSSTSSSG 378

Query: 704  QQ---QWNTHQVDXXXXXXXXXXXXXXXXXXXXGFKELMMGTPSVFDPKHXXXXXXXXXX 534
            QQ   QWN  Q++                    G KELMMGTPS+F PK           
Sbjct: 379  QQENLQWNRQQMEPESTSVAAGLGLGLPCDEGSGLKELMMGTPSLFGPKQTTLDLLGLGM 438

Query: 533  XXXXXXXXXLSALMTSIGGGLN---AATSFDNAEFSGEEYGRNSL 408
                     LSAL+TSIGGGL+   AA ++   EF+G++ GR S+
Sbjct: 439  AASGSPSGGLSALITSIGGGLDVAAAAATYRGGEFAGKDMGRVSI 483


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