BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003934
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   128   5e-41
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   128   5e-41
emb|CBI39676.3| unnamed protein product [Vitis vinifera]              110   1e-21
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]    81   2e-17
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C...    94   1e-16

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  128 bits (321), Expect(2) = 5e-41
 Identities = 76/145 (52%), Positives = 91/145 (62%), Gaps = 4/145 (2%)
 Frame = +1

Query: 334 MPLSEFYGTSKGKVEG--SRSTDLAFVPNNGLVELVCENGHIMMQDQSFN-RKAPKIPPN 504
           MP SE Y  +KGK E    ++ DL+F P N  VELV E G IMMQ QS   RK+P    N
Sbjct: 1   MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPL--SN 58

Query: 505 SFPYQTPTFLDKEESE-TASKVGKYRTYDSIYSAPTPPAPSGEPVLNQDDDMAQWFSYPI 681
           SFP  TP   DK+    T SK+GK+ + D I +      PS E  L+QDDDM  W +YPI
Sbjct: 59  SFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPI 118

Query: 682 EDSLQQDYCSDFLPELSGVTVHESS 756
           ++SLQ DYCSDFL ELSGVTV+E S
Sbjct: 119 DESLQHDYCSDFLQELSGVTVNELS 143



 Score = 67.4 bits (163), Expect(2) = 5e-41
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
 Frame = +2

Query: 869  EKRDRYDQVGRSSDNGSARASELSLGQGSALK-------PPPSKYASLYPWSLPQGQTSV 1027
            EKR+  +Q  + S+  SA  + +SL QG+A K       P   + + LYP S  Q QT  
Sbjct: 152  EKRNSNNQTIKDSNTISAH-NGVSLEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLF 210

Query: 1028 SSVGSRVSD---------IPNDVSGNLVSSQAPAGHLSHTKVQKQDSGLPXXXXXXXXXX 1180
             S+ S+VSD         + + VSGN +   A     S TK QKQD G            
Sbjct: 211  PSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTRNNSGLMNFS 270

Query: 1181 XXXXPAAMARANIQNASSVSALGTSAAGRMIENDKPPLAS 1300
                PAA+ +AN+QN  +++   +S+  R+   DK P AS
Sbjct: 271  HFSRPAALVKANLQNIGAIAGPSSSSKDRIGSKDKQPAAS 310


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  128 bits (321), Expect(2) = 5e-41
 Identities = 76/145 (52%), Positives = 91/145 (62%), Gaps = 4/145 (2%)
 Frame = +1

Query: 334 MPLSEFYGTSKGKVEG--SRSTDLAFVPNNGLVELVCENGHIMMQDQSFN-RKAPKIPPN 504
           MP SE Y  +KGK E    ++ DL+F P N  VELV E G IMMQ QS   RK+P    N
Sbjct: 1   MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPL--SN 58

Query: 505 SFPYQTPTFLDKEESE-TASKVGKYRTYDSIYSAPTPPAPSGEPVLNQDDDMAQWFSYPI 681
           SFP  TP   DK+    T SK+GK+ + D I +      PS E  L+QDDDM  W +YPI
Sbjct: 59  SFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPI 118

Query: 682 EDSLQQDYCSDFLPELSGVTVHESS 756
           ++SLQ DYCSDFL ELSGVTV+E S
Sbjct: 119 DESLQHDYCSDFLQELSGVTVNELS 143



 Score = 67.4 bits (163), Expect(2) = 5e-41
 Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
 Frame = +2

Query: 869  EKRDRYDQVGRSSDNGSARASELSLGQGSALK-------PPPSKYASLYPWSLPQGQTSV 1027
            EKR+  +Q  + S+  SA  + +SL QG+A K       P   + + LYP S  Q QT  
Sbjct: 152  EKRNSNNQTIKDSNTISAH-NGVSLEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLF 210

Query: 1028 SSVGSRVSD---------IPNDVSGNLVSSQAPAGHLSHTKVQKQDSGLPXXXXXXXXXX 1180
             S+ S+VSD         + + VSGN +   A     S TK QKQD G            
Sbjct: 211  PSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTRNNSGLMNFS 270

Query: 1181 XXXXPAAMARANIQNASSVSALGTSAAGRMIENDKPPLAS 1300
                PAA+ +AN+QN  +++   +S+  R+   DK P AS
Sbjct: 271  HFSRPAALVKANLQNIGAIAGPSSSSKDRIGSKDKQPAAS 310


>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  110 bits (274), Expect = 1e-21
 Identities = 70/145 (48%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
 Frame = +1

Query: 334 MPLSEFYGTSKGKVEG--SRSTDLAFVPNNGLVELVCENGHIMMQDQSFN-RKAPKIPPN 504
           MP SE Y  +KGK E    ++ DL+F P N  VELV E G IMMQ QS   RK+P    N
Sbjct: 1   MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPL--SN 58

Query: 505 SFPYQTPTFLDKEESE-TASKVGKYRTYDSIYSAPTPPAPSGEPVLNQDDDMAQWFSYPI 681
           SFP  TP   DK+    T SK+G                       NQDDDM  W +YPI
Sbjct: 59  SFPSHTPKPRDKDTGHGTNSKMG-----------------------NQDDDMVPWLNYPI 95

Query: 682 EDSLQQDYCSDFLPELSGVTVHESS 756
           ++SLQ DYCSDFL ELSGVTV+E S
Sbjct: 96  DESLQHDYCSDFLQELSGVTVNELS 120


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
          Length = 713

 Score = 80.9 bits (198), Expect(2) = 2e-17
 Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
 Frame = +1

Query: 334 MPLSEFYGTSKGKVEGSRSTDLAFVPNNGLVELVCENGHIMMQDQSFN-RKAPKIPPNSF 510
           MP SE Y  + G+V+ S+  +      N  +ELV ENG ++MQ QS   RK P    N+ 
Sbjct: 1   MPFSELYRMA-GRVDSSQDFE------NDFLELVWENGQVVMQGQSSRTRKNPSC--NTL 51

Query: 511 P-YQTPTFLDKEESET-ASKVGKYR-TYDSIYSAPTPPAPSGEPVLNQDDDMAQWFSYPI 681
           P Y TP   D++   +   K GK+    DS         PS E  L++DDD   W +Y I
Sbjct: 52  PSYNTPKNRDRDVGNSNIGKTGKFGFVVDSELDEIPLSVPSSEMGLSEDDDTLPWLNYSI 111

Query: 682 EDSLQQDYCSDFLPELSGVTVHESS 756
           ++ L  +YC DFLPE S  T +E+S
Sbjct: 112 DEPLHHEYCHDFLPEFSSATANEAS 136



 Score = 35.4 bits (80), Expect(2) = 2e-17
 Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 17/156 (10%)
 Frame = +2

Query: 869  EKRDRYDQVGRSSDNGSAR---------ASELSLGQGSALKPPPSKYASLYPWSLPQGQT 1021
            +KR    QV R S+  SA            +++L   + +  P +  + L+  S  Q Q 
Sbjct: 145  DKRSSSSQVLRDSNPNSAHEDACLQQRNVGKVALIGRADVSRPRTGTSQLHSLSSQQSQA 204

Query: 1022 SVSSVGSRVSDIPNDVS-------GNLVSSQAPAGHLSHTKVQKQDSGLPXXXXXXXXXX 1180
            S  S  SRVSD   D +       G   +  + AG     K+ + D   P          
Sbjct: 205  SYPSFRSRVSDTAGDNTSATHRDVGKNSTQISSAGGSPGMKILRPDPVTPSNNNPSIVNF 264

Query: 1181 XXXX-PAAMARANIQNASSVSALGTSAAGRMIENDK 1285
                 PAA+ +AN+Q    ++  G+S+  R+   DK
Sbjct: 265  SHFSRPAALVKANVQTNGVMAGSGSSSMIRIANKDK 300


>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
           gi|449522990|ref|XP_004168508.1| PREDICTED:
           transcription factor PIF3-like [Cucumis sativus]
          Length = 696

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
 Frame = +1

Query: 334 MPLSEFYGTSKGKVEGSRSTDLAFVPNNGLVELVCENGHIMMQDQSFNRKAPKIPPNS-- 507
           MPLSE Y  ++GK++ ++  +      N + ELV ENG I++Q QS NR       N+  
Sbjct: 1   MPLSELYRVARGKLDSTQDKNSM----NDVFELVWENGQILLQGQS-NRPRKNSNLNTSQ 55

Query: 508 ---FPYQTPTFLDKEESE-TASKVGKYRTYDSIYS--APTPPAPSGEPVLNQDDDMAQWF 669
               P  +P   D++      +K+GK+   DS+      T P+P  E   + DDDM  W 
Sbjct: 56  AQCLPSHSPRDRDRDVGYFNNAKMGKFGAIDSVVRDVMSTAPSPDVELAHDDDDDMVPWL 115

Query: 670 SYPIEDSLQQDYCSDFLPELSGVTVHESSMR 762
           SYP++  LQ DY SDFLPELSGVTV++   R
Sbjct: 116 SYPLDGHLQHDYSSDFLPELSGVTVNDFPSR 146