BLASTX nr result

ID: Bupleurum21_contig00003925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003925
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly prot...   179   2e-43
ref|XP_003601257.1| Iron sulfur cluster assembly protein [Medica...   177   1e-42
gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucaly...   173   2e-41
ref|XP_003569498.1| PREDICTED: iron-sulfur cluster assembly enzy...   172   3e-41
gb|ABR16080.1| unknown [Picea sitchensis]                             171   6e-41

>ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly protein 1, mitochondrial
           [Vitis vinifera]
          Length = 155

 Score =  179 bits (454), Expect = 2e-43
 Identities = 92/110 (83%), Positives = 100/110 (90%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 RVLGLGFRSEKPAITQ--LRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVM 149
           R+LGLG +  K A +Q  LRFYHERVVDHYNNPRNVGSFDK+DP VGTGLVGAPACGDVM
Sbjct: 8   RILGLG-QQGKQAQSQALLRFYHERVVDHYNNPRNVGSFDKNDPDVGTGLVGAPACGDVM 66

Query: 148 KLQIKV-DETGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKN 2
           KLQIKV D+TGKIVDACFKTFGCGSAIASSSVATEWVKG+Q E+V+SIKN
Sbjct: 67  KLQIKVDDQTGKIVDACFKTFGCGSAIASSSVATEWVKGKQTEEVLSIKN 116


>ref|XP_003601257.1| Iron sulfur cluster assembly protein [Medicago truncatula]
           gi|217071590|gb|ACJ84155.1| unknown [Medicago
           truncatula] gi|355490305|gb|AES71508.1| Iron sulfur
           cluster assembly protein [Medicago truncatula]
           gi|388507346|gb|AFK41739.1| unknown [Medicago
           truncatula] gi|388513789|gb|AFK44956.1| unknown
           [Medicago truncatula]
          Length = 164

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/102 (84%), Positives = 94/102 (92%), Gaps = 1/102 (0%)
 Frame = -1

Query: 304 FRSEKPAITQL-RFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVMKLQIKVD 128
           F +  PAI  L RFYHERVVDHY+NPRNVGSFDK+DPTVGTGLVGAPACGDVMKLQIKVD
Sbjct: 14  FETPNPAIRVLPRFYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVD 73

Query: 127 ETGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKN 2
           E GKI+DA FKTFGCGSAIASSSVATEWVKG+QME+V++IKN
Sbjct: 74  ENGKIIDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKN 115


>gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis]
          Length = 173

 Score =  173 bits (438), Expect = 2e-41
 Identities = 88/110 (80%), Positives = 96/110 (87%), Gaps = 3/110 (2%)
 Frame = -1

Query: 322 RVLGLGFRSEKPA--ITQLRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVM 149
           ++ GL   +  PA  +  LR YHERVVDHYNNPRNVGSFDK+DP VGTGLVGAPACGDVM
Sbjct: 8   KLAGLAGAAAGPARVVPPLRLYHERVVDHYNNPRNVGSFDKNDPAVGTGLVGAPACGDVM 67

Query: 148 KLQIKVD-ETGKIVDACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKN 2
           KLQIKVD ETGKIVDA FKTFGCGSAIASSSVATEWVKG+QME+V+SIKN
Sbjct: 68  KLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKN 117


>ref|XP_003569498.1| PREDICTED: iron-sulfur cluster assembly enzyme ISCU,
           mitochondrial-like [Brachypodium distachyon]
          Length = 175

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/92 (90%), Positives = 88/92 (95%), Gaps = 1/92 (1%)
 Frame = -1

Query: 274 LRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVMKLQIKVDE-TGKIVDACF 98
           +R YHERVVDHYNNPRNVGSFDK DP VGTGLVGAPACGDVMKLQI+VDE TGKIVDACF
Sbjct: 35  VRAYHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACF 94

Query: 97  KTFGCGSAIASSSVATEWVKGRQMEDVVSIKN 2
           KTFGCGSAIASSSVATEWVKG+QME+VV+IKN
Sbjct: 95  KTFGCGSAIASSSVATEWVKGKQMEEVVTIKN 126


>gb|ABR16080.1| unknown [Picea sitchensis]
          Length = 165

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/96 (86%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
 Frame = -1

Query: 286 AITQLRFYHERVVDHYNNPRNVGSFDKSDPTVGTGLVGAPACGDVMKLQIKVD-ETGKIV 110
           A+  +R YHERVVDHYNNPRNVGSFDK+DP VGTGLVGAPACGDVMKLQIKVD ETGKIV
Sbjct: 20  AMGGVRAYHERVVDHYNNPRNVGSFDKNDPDVGTGLVGAPACGDVMKLQIKVDSETGKIV 79

Query: 109 DACFKTFGCGSAIASSSVATEWVKGRQMEDVVSIKN 2
           D+CFKTFGCGSAIASSSVATEW+KG+ ME+VVSIKN
Sbjct: 80  DSCFKTFGCGSAIASSSVATEWIKGKPMEEVVSIKN 115


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