BLASTX nr result

ID: Bupleurum21_contig00003915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003915
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricin...   301   1e-79
ref|XP_002312384.1| predicted membrane protein [Populus trichoca...   301   1e-79
ref|XP_002329381.1| predicted membrane protein [Populus trichoca...   299   4e-79
ref|XP_002314881.1| predicted membrane protein [Populus trichoca...   296   2e-78
ref|NP_173923.1| putative transmembrane protein [Arabidopsis tha...   294   1e-77

>ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223531427|gb|EEF33261.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 228

 Score =  301 bits (770), Expect = 1e-79
 Identities = 151/206 (73%), Positives = 174/206 (84%), Gaps = 2/206 (0%)
 Frame = +1

Query: 1   KTFFAAAILAMRYPRRLVLMGCLSALVVMTILSALLGWAAPNLIPRKFTHHITTILFFGF 180
           KTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA++GWAAPNL+ R +THHITT+LFFGF
Sbjct: 23  KTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAVVGWAAPNLLSRTWTHHITTLLFFGF 82

Query: 181 GLWSLWDAF-NXXXXXXXXXXXXXXXXNFNSN-GPVKENSKGGDDSKKQSRPFLTQFFSP 354
           G+WSLWD F +                ++ +N G  K+ +K  D+ KKQ RPFL+QFFSP
Sbjct: 83  GIWSLWDGFTDKGEAEELAEVEAKLDADWKANKGTTKDGAKADDELKKQRRPFLSQFFSP 142

Query: 355 ILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILGQALCTTAAVMGGKSLAKQI 534
           ILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVVLGGI+GQALCTTAAV+GGKSLA QI
Sbjct: 143 ILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGIVGQALCTTAAVVGGKSLASQI 202

Query: 535 SEKLIALSGGALFIVFGIQSFLSTVE 612
           SEK++ALSGG LFI+FGIQSFLSTVE
Sbjct: 203 SEKIVALSGGVLFIIFGIQSFLSTVE 228


>ref|XP_002312384.1| predicted membrane protein [Populus trichocarpa]
           gi|222852204|gb|EEE89751.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 224

 Score =  301 bits (770), Expect = 1e-79
 Identities = 155/206 (75%), Positives = 171/206 (83%), Gaps = 2/206 (0%)
 Frame = +1

Query: 1   KTFFAAAILAMRYPRRLVLMGCLSALVVMTILSALLGWAAPNLIPRKFTHHITTILFFGF 180
           KTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA +GWAAPNLI R +THHITTILFFGF
Sbjct: 19  KTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAAPNLISRAWTHHITTILFFGF 78

Query: 181 GLWSLWDAFNXXXXXXXXXXXXXXXX-NFNSN-GPVKENSKGGDDSKKQSRPFLTQFFSP 354
           GLWSLWD FN                 ++ +N G  K  SK  D+ KKQ R FL+QFFSP
Sbjct: 79  GLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKAGSKDSDEFKKQRRTFLSQFFSP 138

Query: 355 ILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILGQALCTTAAVMGGKSLAKQI 534
           ILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVV+GGI+GQALCTTAAV+GGKSLA QI
Sbjct: 139 ILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIVGQALCTTAAVIGGKSLASQI 198

Query: 535 SEKLIALSGGALFIVFGIQSFLSTVE 612
           SEK++ALSGG LFIVFGIQSFLSTVE
Sbjct: 199 SEKIVALSGGVLFIVFGIQSFLSTVE 224


>ref|XP_002329381.1| predicted membrane protein [Populus trichocarpa]
           gi|222870431|gb|EEF07562.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 228

 Score =  299 bits (765), Expect = 4e-79
 Identities = 155/206 (75%), Positives = 170/206 (82%), Gaps = 2/206 (0%)
 Frame = +1

Query: 1   KTFFAAAILAMRYPRRLVLMGCLSALVVMTILSALLGWAAPNLIPRKFTHHITTILFFGF 180
           KTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA +GWAAPNLI R +THHITTILFFGF
Sbjct: 23  KTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAAPNLISRAWTHHITTILFFGF 82

Query: 181 GLWSLWDAFNXXXXXXXXXXXXXXXX-NFNSN-GPVKENSKGGDDSKKQSRPFLTQFFSP 354
           GLWSLWD FN                 ++ +N G  K  SK  D+ KKQ R FL+QFFSP
Sbjct: 83  GLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKVGSKDSDELKKQRRTFLSQFFSP 142

Query: 355 ILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILGQALCTTAAVMGGKSLAKQI 534
           ILLKAFSITFFGEWGDKSQ+ATIGLAADENPFGVV+GGI+GQALCTTAAV+GGKSLA QI
Sbjct: 143 ILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIVGQALCTTAAVIGGKSLASQI 202

Query: 535 SEKLIALSGGALFIVFGIQSFLSTVE 612
           SEK+ ALSGG LFIVFGIQSFLSTVE
Sbjct: 203 SEKIAALSGGVLFIVFGIQSFLSTVE 228


>ref|XP_002314881.1| predicted membrane protein [Populus trichocarpa]
           gi|222863921|gb|EEF01052.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 228

 Score =  296 bits (759), Expect = 2e-78
 Identities = 152/206 (73%), Positives = 169/206 (82%), Gaps = 2/206 (0%)
 Frame = +1

Query: 1   KTFFAAAILAMRYPRRLVLMGCLSALVVMTILSALLGWAAPNLIPRKFTHHITTILFFGF 180
           KTFFAAAILAMR+PRRLVL GCL+AL+VMTILSA++GWAAPNLI R +THHITTILFFGF
Sbjct: 23  KTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAIVGWAAPNLISRTWTHHITTILFFGF 82

Query: 181 GLWSLWDAFNXXXXXXXXXXXXXXXX-NFNSN-GPVKENSKGGDDSKKQSRPFLTQFFSP 354
           G WSLWD FN                 ++ +N G  K  SK  D+ KK+ RPFL+Q FSP
Sbjct: 83  GFWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTTKGGSKDDDELKKRRRPFLSQLFSP 142

Query: 355 ILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILGQALCTTAAVMGGKSLAKQI 534
           ILLKAFSITFFGEWGDKSQ+ATIGLAADENP GVVLGGI+GQALCTTAAV GGKSLA QI
Sbjct: 143 ILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIVGQALCTTAAVFGGKSLASQI 202

Query: 535 SEKLIALSGGALFIVFGIQSFLSTVE 612
           SEK++ALSGG LFI+FGIQSFLSTVE
Sbjct: 203 SEKIVALSGGVLFIIFGIQSFLSTVE 228


>ref|NP_173923.1| putative transmembrane protein [Arabidopsis thaliana]
           gi|75169140|sp|Q9C6M1.1|GDT14_ARATH RecName:
           Full=GDT1-like protein 4
           gi|12321501|gb|AAG50804.1|AC079281_6 transmembrane
           protein, putative [Arabidopsis thaliana]
           gi|27754432|gb|AAO22664.1| putative transmembrane
           protein [Arabidopsis thaliana]
           gi|28394045|gb|AAO42430.1| putative transmembrane
           protein [Arabidopsis thaliana]
           gi|332192516|gb|AEE30637.1| putative transmembrane
           protein [Arabidopsis thaliana]
          Length = 230

 Score =  294 bits (752), Expect = 1e-77
 Identities = 150/207 (72%), Positives = 170/207 (82%), Gaps = 3/207 (1%)
 Frame = +1

Query: 1   KTFFAAAILAMRYPRRLVLMGCLSALVVMTILSALLGWAAPNLIPRKFTHHITTILFFGF 180
           KTFFAAAILAMRYPRRLVL GCLSAL+VMTILSA LGWAAPNLI RK+THHITT+LFFGF
Sbjct: 23  KTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLISRKWTHHITTLLFFGF 82

Query: 181 GLWSLWDAFNXXXXXXXXXXXXXXXXN--FNSNGPV-KENSKGGDDSKKQSRPFLTQFFS 351
           GLWSLWD F                 +    +NG   K++SK  D++KKQ+R FLTQFFS
Sbjct: 83  GLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPKDSSKREDENKKQNRAFLTQFFS 142

Query: 352 PILLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGILGQALCTTAAVMGGKSLAKQ 531
           PI LKAFSI FFGEWGDKSQLATIGLAADENPFGVVLGG++ Q LCTTAAV+GGKSLA Q
Sbjct: 143 PIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLGGVVAQFLCTTAAVIGGKSLASQ 202

Query: 532 ISEKLIALSGGALFIVFGIQSFLSTVE 612
           ISE+++ALSGG LFI+FGIQS+L++VE
Sbjct: 203 ISERIVALSGGMLFIIFGIQSYLTSVE 229


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