BLASTX nr result

ID: Bupleurum21_contig00003913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003913
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vi...    97   4e-18
emb|CBI40960.3| unnamed protein product [Vitis vinifera]               97   4e-18
ref|XP_002531928.1| leucine-rich repeat-containing protein, puta...    96   6e-18
gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis la...    96   1e-17
ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, pa...    96   1e-17

>ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
 Frame = -3

Query: 749  IDAQDCTALKEI-----PSVMYESKSLRFDFSNCTKLAENQTIESLASMLLPQRRVDPYR 585
            I+AQ+CT+L+ +     P  +  + S R ++   T LAE   I                 
Sbjct: 959  INAQNCTSLETLSGLSAPCWLAFTNSFRQNWGQETYLAEVSRIPKF-------------- 1004

Query: 584  SLNLFLPGTRVPEWFTNRNAGDLIRIDLPQPWSFKKFKGFATCAVFAPQDP-KGSKGRLI 408
              N +LPG  +PEWF N+  GD I + LP  W    F GFA C VFA ++P + S+G ++
Sbjct: 1005 --NTYLPGNGIPEWFRNQCMGDSIMVQLPSHWYNDNFLGFAMCIVFALKEPNQCSRGAML 1062

Query: 407  -EVSYSVKSFNNVFLCGIGIETRIFPNETRCYESDQVWLSY--MVPTLSWEMRWENAKDY 237
             E+  S    +N+      I      +     ESD +WL Y    P    +M W N   +
Sbjct: 1063 CELESSDLDPSNLGCFLDHIVWEGHSDGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSH 1122

Query: 236  IEVEFEIYGIYCKVKECGVRLVYDDEQVEGNSRITEWLP 120
            I+  F I GI  +VK CG RLVY ++  + NS+IT++ P
Sbjct: 1123 IKASFVIAGIPHEVKWCGFRLVYMEDLNDDNSKITKYSP 1161


>emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
 Frame = -3

Query: 749  IDAQDCTALKEI-----PSVMYESKSLRFDFSNCTKLAENQTIESLASMLLPQRRVDPYR 585
            I+AQ+CT+L+ +     P  +  + S R ++   T LAE   I                 
Sbjct: 465  INAQNCTSLETLSGLSAPCWLAFTNSFRQNWGQETYLAEVSRIPKF-------------- 510

Query: 584  SLNLFLPGTRVPEWFTNRNAGDLIRIDLPQPWSFKKFKGFATCAVFAPQDP-KGSKGRLI 408
              N +LPG  +PEWF N+  GD I + LP  W    F GFA C VFA ++P + S+G ++
Sbjct: 511  --NTYLPGNGIPEWFRNQCMGDSIMVQLPSHWYNDNFLGFAMCIVFALKEPNQCSRGAML 568

Query: 407  -EVSYSVKSFNNVFLCGIGIETRIFPNETRCYESDQVWLSY--MVPTLSWEMRWENAKDY 237
             E+  S    +N+      I      +     ESD +WL Y    P    +M W N   +
Sbjct: 569  CELESSDLDPSNLGCFLDHIVWEGHSDGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSH 628

Query: 236  IEVEFEIYGIYCKVKECGVRLVYDDEQVEGNSRITEWLP 120
            I+  F I GI  +VK CG RLVY ++  + NS+IT++ P
Sbjct: 629  IKASFVIAGIPHEVKWCGFRLVYMEDLNDDNSKITKYSP 667


>ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223528407|gb|EEF30442.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
 Frame = -3

Query: 764  STMDIIDAQDCTALKEIPSVMYES--KSLRFDFSNCTKLAENQTIESLASMLLP---QRR 600
            S++ ++ AQ C+AL+ +P  +  S  +S RF+F+NC KL ENQ   ++  M+L    Q  
Sbjct: 667  SSVKLLSAQACSALETLPETLDLSGLQSPRFNFTNCFKLVENQGCNNIGFMMLRNYLQGL 726

Query: 599  VDPYRSLNLFLPGTRVPEWFTNRNAGDL-IRIDLPQPWSFKKFKGFATCAVFAPQDPKGS 423
             +P    ++ +PG+ +P+W ++++ GD  I I+LP  W   K+ GFA CAV+        
Sbjct: 727  SNPKPGFDIIIPGSEIPDWLSHQSLGDCSISIELPPVWCDSKWMGFALCAVY-------- 778

Query: 422  KGRLIEVSYSVKSFNNV---FLCGIGIETRIFPNETRCYE------------SDQVWLSY 288
                  V Y   + N +     C I I+       T C+E            SDQVWL +
Sbjct: 779  ------VIYQEPALNFIDMDLTCFIKIK-----GHTWCHELDYSFAEMELVGSDQVWLFF 827

Query: 287  MVPTLSWEMRWE----------NAKDYIEVEFEIYGIYCKVKECGVRLVYDDEQVEGNSR 138
            +        R+E              + EV F+ +G+   VK+ GVRLVY  + +  N +
Sbjct: 828  L-------SRYEFLGIDCQGVAKTSSHAEVMFKAHGVGLYVKKFGVRLVYQQDVLVFNQK 880

Query: 137  ITEWLPHSVEDNNDITHISNIFHSDNNE 54
            + + +  S  +N ++ H      SDN+E
Sbjct: 881  MDQ-ICSSRNENLEVRHQD----SDNSE 903


>gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
 Frame = -3

Query: 764  STMDIIDAQDCTALKEIP--SVMYESKS---LRFDFSNCTKLAENQ-------------T 639
            S+++ ++A  CT+L+     S  Y SK    LRF+F+NC +L ENQ              
Sbjct: 1023 SSVESLNAHSCTSLETFTCSSSAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQL 1082

Query: 638  IESLASMLLPQRRVD-PYRSLNLFLPGTRVPEWFTNRNAGDLIRIDLPQPWSFKKFKGFA 462
            + S+   L+P R +  P+   N  +PG R+PEWF +++ G  + I+LPQ W   K  G A
Sbjct: 1083 MSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNTKLMGLA 1142

Query: 461  TCAVFAPQDPKGSKGRLIEVSYSVKSFNNVFLCGIGIETRIFPNE-TRCYESDQVWLSYM 285
             CA    +            S+ +  + N      G+ +   P E ++  ESD     Y+
Sbjct: 1143 FCAALNFKGAMDGNPGTEPSSFGLVCYLNDCFVETGLHSLYTPPEGSKFIESDHTLFEYI 1202

Query: 284  ------VPTLSWEMRWENAKDYIEVEFEIYGIYCKVKECGVRLVYDDEQVEG 147
                  +   +W   +    D +   F + G   +VK+CG+RLVY++++ +G
Sbjct: 1203 SLARLEICLGNW---FRKLSDNVVASFALTGSDGEVKKCGIRLVYEEDEKDG 1251


>ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
 Frame = -3

Query: 764  STMDIIDAQDCTALKEIP--SVMYESKS---LRFDFSNCTKLAENQ-------------T 639
            S+++ ++A  CT+L+     S  Y SK    LRF+F+NC +L ENQ              
Sbjct: 952  SSVESLNAHSCTSLETFTCSSSAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQL 1011

Query: 638  IESLASMLLPQRRVD-PYRSLNLFLPGTRVPEWFTNRNAGDLIRIDLPQPWSFKKFKGFA 462
            + S+   L+P R +  P+   N  +PG R+PEWF +++ G  + I+LPQ W   K  G A
Sbjct: 1012 MSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNTKLMGLA 1071

Query: 461  TCAVFAPQDPKGSKGRLIEVSYSVKSFNNVFLCGIGIETRIFPNE-TRCYESDQVWLSYM 285
             CA    +            S+ +  + N      G+ +   P E ++  ESD     Y+
Sbjct: 1072 FCAALNFKGAMDGNPGTEPSSFGLVCYLNDCFVETGLHSLYTPPEGSKFIESDHTLFEYI 1131

Query: 284  ------VPTLSWEMRWENAKDYIEVEFEIYGIYCKVKECGVRLVYDDEQVEG 147
                  +   +W   +    D +   F + G   +VK+CG+RLVY++++ +G
Sbjct: 1132 SLARLEICLGNW---FRKLSDNVVASFALTGSDGEVKKCGIRLVYEEDEKDG 1180


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