BLASTX nr result

ID: Bupleurum21_contig00003910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003910
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplast...   211   6e-53
emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]   211   6e-53
ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002533094.1| conserved hypothetical protein [Ricinus comm...   182   2e-44
ref|XP_002313431.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44

>ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplastic [Vitis vinifera]
           gi|297746060|emb|CBI16116.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  211 bits (536), Expect = 6e-53
 Identities = 96/138 (69%), Positives = 118/138 (85%)
 Frame = +3

Query: 6   DHSQVFALASVWLLFLCIGGTACLVPLVHAIGQAYQEAFSSGYTYNSQVSTIDSLPISNS 185
           D SQVFALAS+W+LFL  GG+ACLVP+++ +GQAYQ+AF+SG +Y+SQ S +  L  +N 
Sbjct: 130 DPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLSYSSQASALQLLATANG 189

Query: 186 MMFMVLGSMIGYPLASASVGALQRLWKNDLVAIKGACPNCGEEVFAFVRSSQSNSAPHRA 365
           ++FMVLGS+IGYP+ASASVG LQ LW+NDLVA+KGACPNCGEEVFAFV+S Q NS+PH A
Sbjct: 190 ILFMVLGSVIGYPVASASVGVLQGLWRNDLVALKGACPNCGEEVFAFVKSGQPNSSPHSA 249

Query: 366 DCHVCSCSLEFRTKVERS 419
           DCHVC  SLEF TKVE+S
Sbjct: 250 DCHVCESSLEFSTKVEQS 267


>emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]
          Length = 1059

 Score =  211 bits (536), Expect = 6e-53
 Identities = 96/138 (69%), Positives = 118/138 (85%)
 Frame = +3

Query: 6    DHSQVFALASVWLLFLCIGGTACLVPLVHAIGQAYQEAFSSGYTYNSQVSTIDSLPISNS 185
            D SQVFALAS+W+LFL  GG+ACLVP+++ +GQAYQ+AF+SG +Y+SQ S +  L  +N 
Sbjct: 896  DPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLSYSSQASALQLLATANG 955

Query: 186  MMFMVLGSMIGYPLASASVGALQRLWKNDLVAIKGACPNCGEEVFAFVRSSQSNSAPHRA 365
            ++FMVLGS+IGYP+ASASVG LQ LW+NDLVA+KGACPNCGEEVFAFV+S Q NS+PH A
Sbjct: 956  ILFMVLGSVIGYPVASASVGVLQGLWRNDLVALKGACPNCGEEVFAFVKSGQPNSSPHSA 1015

Query: 366  DCHVCSCSLEFRTKVERS 419
            DCHVC  SLEF TKVE+S
Sbjct: 1016 DCHVCESSLEFSTKVEQS 1033


>ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|222847127|gb|EEE84674.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/142 (62%), Positives = 110/142 (77%)
 Frame = +3

Query: 6   DHSQVFALASVWLLFLCIGGTACLVPLVHAIGQAYQEAFSSGYTYNSQVSTIDSLPISNS 185
           D SQ FALAS+W+LFL IG +AC  P+++ +G AYQ+AF SG  + SQ   I  L   N 
Sbjct: 133 DISQAFALASIWVLFLTIGSSACAFPIIYTVGLAYQDAFGSGIAHGSQAPIIGFLATVNG 192

Query: 186 MMFMVLGSMIGYPLASASVGALQRLWKNDLVAIKGACPNCGEEVFAFVRSSQSNSAPHRA 365
           ++FM +GS+IGYP+ASASV  LQ LW+NDLVA+KGACPNCGEEVFAFV+S QSN +PHRA
Sbjct: 193 ILFMAVGSLIGYPIASASVKVLQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNDSPHRA 252

Query: 366 DCHVCSCSLEFRTKVERSIAVV 431
           DCHVC   LEFRTKVE++ + V
Sbjct: 253 DCHVCESLLEFRTKVEQTTSRV 274


>ref|XP_002533094.1| conserved hypothetical protein [Ricinus communis]
           gi|223527106|gb|EEF29286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score =  182 bits (463), Expect = 2e-44
 Identities = 84/138 (60%), Positives = 109/138 (78%)
 Frame = +3

Query: 6   DHSQVFALASVWLLFLCIGGTACLVPLVHAIGQAYQEAFSSGYTYNSQVSTIDSLPISNS 185
           D SQVFALAS+W++FL IG + C+ P++++   AYQ+A SS  +  SQ S +  L   N 
Sbjct: 126 DISQVFALASIWIVFLTIGSSLCVGPIIYSFVLAYQDAISSKISQGSQASMVQFLATVNG 185

Query: 186 MMFMVLGSMIGYPLASASVGALQRLWKNDLVAIKGACPNCGEEVFAFVRSSQSNSAPHRA 365
           ++FM +G++IGYP+AS+SV  LQ LW+NDLVA+KGACPNCGEEVFAFV+S QSN++PHRA
Sbjct: 186 ILFMAVGTLIGYPIASSSVKVLQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNNSPHRA 245

Query: 366 DCHVCSCSLEFRTKVERS 419
           DCHVC   LEFRTKVER+
Sbjct: 246 DCHVCESLLEFRTKVERT 263


>ref|XP_002313431.1| predicted protein [Populus trichocarpa] gi|222849839|gb|EEE87386.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/142 (59%), Positives = 111/142 (78%)
 Frame = +3

Query: 6   DHSQVFALASVWLLFLCIGGTACLVPLVHAIGQAYQEAFSSGYTYNSQVSTIDSLPISNS 185
           D SQ FALAS+W+LFL +G +AC +P+++ IG AYQ+AF S  ++ SQ   I  L   N 
Sbjct: 131 DISQAFALASIWILFLTVGCSACALPIIYTIGLAYQDAFGSVISHGSQTPIIGFLATVNG 190

Query: 186 MMFMVLGSMIGYPLASASVGALQRLWKNDLVAIKGACPNCGEEVFAFVRSSQSNSAPHRA 365
           ++FM + ++IGYP+ASASV  LQ LW+NDLVA+KGACPNCGEEVFAFV+S QSN++ HRA
Sbjct: 191 ILFMAVSALIGYPIASASVKVLQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNNSTHRA 250

Query: 366 DCHVCSCSLEFRTKVERSIAVV 431
           DCHVC   LEFRT+VE++I+ V
Sbjct: 251 DCHVCESLLEFRTEVEQTISRV 272


Top