BLASTX nr result

ID: Bupleurum21_contig00003899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003899
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002270549.1| PREDICTED: F-box protein PP2-B1 [Vitis vinif...    94   2e-17
emb|CBI38325.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_004146355.1| PREDICTED: F-box protein PP2-B10-like [Cucum...    86   4e-15
ref|XP_002270412.1| PREDICTED: F-box protein PP2-B1-like [Vitis ...    85   7e-15

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 18/171 (10%)
 Frame = +1

Query: 46  LDKWTGKRRLEMSTNKLSVTFLDSD-YWN----PKRRLR----LGHVVWLEIEGKVSTFK 198
           L+K +GK+   +++ +L++ + D+  YW     P+ R      L  V W EI GK++T  
Sbjct: 110 LEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQAVCWFEIRGKINTCM 169

Query: 199 LSSNTTYTAYLRFAFPRDFYYGFH-VPLETSIGITGEESINKFVYL-------DPRIA-K 351
           LS  T Y AYL F   R   +GF  VP+E+SI I G E+  + +YL       +P  + +
Sbjct: 170 LSPRTNYAAYLVFHAGRS--HGFEDVPVESSIEIVGNETTTRVIYLARYRKNEEPTSSIR 227

Query: 352 SECQYLKRRENNLFEVELGDYFHNDGETRDLEMTVREVKSGKPKCGIEIYG 504
           S+  Y K+RE++ FE+ELG++F   GE  +LE+T+ EVK+G  K G+ + G
Sbjct: 228 SDLPYPKKREDSWFEIELGEFFIEGGEDTELEITLMEVKAGHWKDGLIVEG 278


>ref|XP_002270549.1| PREDICTED: F-box protein PP2-B1 [Vitis vinifera]
          Length = 306

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 35/188 (18%)
 Frame = +1

Query: 46  LDKWTGKRRLEMSTNKLSVTFLDSD-YWN----PKRRL----RLGHVVWLEIEGKVSTFK 198
           LDK +GK+   ++   L++T+ D+  YW     P  R      L  V WLEI+GK++T  
Sbjct: 110 LDKKSGKKCYMLAARDLTITWSDTPMYWTWISLPHSRFIEVANLNQVCWLEIKGKINTGM 169

Query: 199 LSSNTTYTAYLRFAFPRDFYYGFHVPLETSIGITGEESINKFVYLD-PRIAKSE------ 357
           LSS T Y  +L F     FY   +VP+E+S+G+ G  +  + +YLD P++  S       
Sbjct: 170 LSSMTNYVVFLVFQRNDRFYGLKNVPVESSVGMIGGVTTKRVIYLDAPQVESSNHPDHDF 229

Query: 358 ----CQY---------------LKRRENNLFEVELGDYFHNDGETRDLEMTVREVKSGKP 480
                QY               LK+R +  +EVELG++F  +G+ ++LE++V EVKSG  
Sbjct: 230 GERFLQYENVISSMTGNPDPASLKKRIDGWYEVELGEFFSGEGKGKELEISVMEVKSGNW 289

Query: 481 KCGIEIYG 504
           K G+ I G
Sbjct: 290 KSGLLIEG 297


>emb|CBI38325.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
 Frame = +1

Query: 46  LDKWTGKRRLEMSTNKLSVTFLDSD-YWN----PKRRLR----LGHVVWLEIEGKVSTFK 198
           ++K +GK+   ++   L++ + D+  YW     P+ R +    L  V W EI G+++T  
Sbjct: 133 IEKRSGKKCYMIAARALTIEWGDTPMYWKWISLPQSRFKEVAELISVCWFEIRGRINTCL 192

Query: 199 LSSNTTYTAYLRFAFPRDFYYGFHVPLETSIGITGEESINKFVYLDPRIA---------- 348
           L   T Y AYL F    + Y   + P+E SIGI G     + VYL+P             
Sbjct: 193 LCLKTNYAAYLVFNSTTETYGFEYHPVEVSIGIIGGRISTQSVYLNPSKTQTRRFPVVPR 252

Query: 349 KSECQYLKRRENNLFEVELGDYFHNDGETRDLEMTVREVKSGKPKCGIEIYG 504
           +  CQ+ K+RE+   E+ELG++F N+G   +LEM+V EVK+G  KCG+ I G
Sbjct: 253 RGNCQHPKKREDGWLEIELGEFF-NEGGDEELEMSVLEVKAGNWKCGLIIQG 303


>ref|XP_004146355.1| PREDICTED: F-box protein PP2-B10-like [Cucumis sativus]
          Length = 277

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 27/180 (15%)
 Frame = +1

Query: 46  LDKWTGKRRLEMSTNKLSVTFLDSDY---WNPKRRLRLGHVV------WLEIEGKVSTFK 198
           LD W+GK+ + +    LS++  D+     W P +  R G VV       LE+ GK+S   
Sbjct: 89  LDIWSGKKCIMLGARDLSISGSDTSSLWKWVPHQGSRFGEVVVLLDICLLEVSGKISCRM 148

Query: 199 LSSNTTYTAYLRFAFPRDFYYGFHV-PLETSIGITGEESINKFVYLDPRIAK-------- 351
           LS  TTY AY  F   +  YYGF++ P+E  +G+ G++   K V LDP +          
Sbjct: 149 LSPATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVVGDDCHGKNVCLDPDLDSPSWLHQFL 208

Query: 352 ---------SECQYLKRRENNLFEVELGDYFHNDGETRDLEMTVREVKSGKPKCGIEIYG 504
                    SE +    R + LFE+ELG+ F  +G+  ++E+ +RE     PK G+ + G
Sbjct: 209 PWAESNQNMSEFEQPNWRSDGLFEIELGE-FQTNGKDDEVEVILREDNRCSPKSGLVVVG 267


>ref|XP_002270412.1| PREDICTED: F-box protein PP2-B1-like [Vitis vinifera]
          Length = 299

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 40/193 (20%)
 Frame = +1

Query: 46  LDKWTGKRRLEMSTNKLSVTFLDSD-YWN----PKRRLR----LGHVVWLEIEGKVSTFK 198
           ++K +GK+   ++   L++ + D+  YW     P+ R +    L  V W EI G+++T  
Sbjct: 99  IEKRSGKKCYMIAARALTIEWGDTPMYWKWISLPQSRFKEVAELISVCWFEIRGRINTCL 158

Query: 199 LSSNTTYTAYLRFAFPRDFYYGFHVPLETSIGITGEESINKFVYLDP------------- 339
           L   T Y AYL F    + Y   + P+E SIGI G     + VYL+P             
Sbjct: 159 LCLKTNYAAYLVFNSTTETYGFEYHPVEVSIGIIGGRISTQSVYLNPSKTQTRRFPVVPR 218

Query: 340 RIAK------------------SECQYLKRRENNLFEVELGDYFHNDGETRDLEMTVREV 465
           RI +                    CQ+ K+RE+   E+ELG++F N+G   +LEM+V EV
Sbjct: 219 RIGRFNRGLTQLMGLQASVPAGGNCQHPKKREDGWLEIELGEFF-NEGGDEELEMSVLEV 277

Query: 466 KSGKPKCGIEIYG 504
           K+G  KCG+ I G
Sbjct: 278 KAGNWKCGLIIQG 290


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