BLASTX nr result

ID: Bupleurum21_contig00003892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003892
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   235   3e-60
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin...   233   9e-60
gb|AFK35928.1| unknown [Lotus japonicus]                              232   2e-59
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   231   4e-59
ref|XP_002307132.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59

>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  235 bits (599), Expect = 3e-60
 Identities = 115/127 (90%), Positives = 124/127 (97%)
 Frame = +1

Query: 73  LKIGEEFLKAKCLMNCEVAIILDHRYENLQQTSEDPMNQMSQVFEKSLQYVKRFSRYKNP 252
           LKIG+EFLKAKCLMNCEV++IL+H+YE LQQTS+DPMNQ+SQVFEKSLQYVKRFSRYKNP
Sbjct: 12  LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQYVKRFSRYKNP 71

Query: 253 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDEAIEKMLNDL 432
           DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSI+SRGR  DDEAIEKMLNDL
Sbjct: 72  DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQDDEAIEKMLNDL 131

Query: 433 SLIKKFE 453
           SLIKKFE
Sbjct: 132 SLIKKFE 138


>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
           gi|255632071|gb|ACU16388.1| unknown [Glycine max]
          Length = 138

 Score =  233 bits (595), Expect = 9e-60
 Identities = 114/127 (89%), Positives = 124/127 (97%)
 Frame = +1

Query: 73  LKIGEEFLKAKCLMNCEVAIILDHRYENLQQTSEDPMNQMSQVFEKSLQYVKRFSRYKNP 252
           LKIG+EFLKAKCLMNCEV++IL+H+YE LQQTS+DPMNQ+SQVFEKSLQYVKRFSRYKNP
Sbjct: 12  LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71

Query: 253 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDEAIEKMLNDL 432
           DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIA+VPSI+SRGR  DDEAIEKMLNDL
Sbjct: 72  DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQDDEAIEKMLNDL 131

Query: 433 SLIKKFE 453
           SLIKKFE
Sbjct: 132 SLIKKFE 138


>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/127 (88%), Positives = 124/127 (97%)
 Frame = +1

Query: 73  LKIGEEFLKAKCLMNCEVAIILDHRYENLQQTSEDPMNQMSQVFEKSLQYVKRFSRYKNP 252
           LKIG+EFLKAKCLMNCEV++IL+H+YE LQQ+S+DPMNQ+SQVFEKSLQYVKRFSRYKNP
Sbjct: 12  LKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71

Query: 253 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDEAIEKMLNDL 432
           DAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSI++RGR  DDEAIEKMLNDL
Sbjct: 72  DAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQDDEAIEKMLNDL 131

Query: 433 SLIKKFE 453
           SLIKKFE
Sbjct: 132 SLIKKFE 138


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  231 bits (590), Expect = 4e-59
 Identities = 113/127 (88%), Positives = 123/127 (96%)
 Frame = +1

Query: 73  LKIGEEFLKAKCLMNCEVAIILDHRYENLQQTSEDPMNQMSQVFEKSLQYVKRFSRYKNP 252
           LKIG+EFLKAKCLMNCEVA+IL+H+YE LQQ S+DP+NQ+SQVFEKSLQYVKRFSRYKNP
Sbjct: 12  LKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQYVKRFSRYKNP 71

Query: 253 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDEAIEKMLNDL 432
           DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSI+++GR  DDEAIEKMLNDL
Sbjct: 72  DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDL 131

Query: 433 SLIKKFE 453
           SLIKKFE
Sbjct: 132 SLIKKFE 138


>ref|XP_002307132.1| predicted protein [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| predicted protein
           [Populus trichocarpa] gi|222853507|gb|EEE91054.1|
           predicted protein [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/127 (88%), Positives = 123/127 (96%)
 Frame = +1

Query: 73  LKIGEEFLKAKCLMNCEVAIILDHRYENLQQTSEDPMNQMSQVFEKSLQYVKRFSRYKNP 252
           LKIG++FLKAKCLMNCEVA+IL+H+YE LQQ S+DPMNQ+SQVFEKSLQYVKRFSRYKNP
Sbjct: 12  LKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQYVKRFSRYKNP 71

Query: 253 DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDEAIEKMLNDL 432
           DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSI+++GR  DDEAIEKMLNDL
Sbjct: 72  DAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEAIEKMLNDL 131

Query: 433 SLIKKFE 453
           SLIKKFE
Sbjct: 132 SLIKKFE 138


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