BLASTX nr result

ID: Bupleurum21_contig00003873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003873
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159642.1| PREDICTED: LOW QUALITY PROTEIN: phytoene deh...    84   1e-14
ref|XP_004136658.1| PREDICTED: 15-cis-phytoene desaturase, chlor...    84   1e-14
ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloropla...    82   4e-14
ref|XP_002515342.1| amine oxidase, putative [Ricinus communis] g...    77   1e-12
ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloropla...    76   2e-12

>ref|XP_004159642.1| PREDICTED: LOW QUALITY PROTEIN: phytoene dehydrogenase,
           chloroplastic/chromoplastic-like [Cucumis sativus]
          Length = 473

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/90 (51%), Positives = 56/90 (62%)
 Frame = -1

Query: 270 PPCATAAAINSGEFFHPHRPHKFQ*CLLARTPP*IATEPAIVIDAGLSGLAAATKIASHN 91
           P    + +I+S    H  +P       L+ +PP       +VI AGL+GLAAAT + S N
Sbjct: 6   PTSMLSYSIHSHRRLHLFKPKSSSSISLSLSPPKPTQTSVVVIGAGLAGLAAATHLRSKN 65

Query: 90  IPFIILEASDAVGGRVHTDTVDDFLLDRGF 1
           IPFI+LEASD VGGRV TD VD FLLDRGF
Sbjct: 66  IPFILLEASDGVGGRVRTDLVDGFLLDRGF 95


>ref|XP_004136658.1| PREDICTED: 15-cis-phytoene desaturase,
           chloroplastic/chromoplastic-like [Cucumis sativus]
          Length = 473

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/90 (51%), Positives = 56/90 (62%)
 Frame = -1

Query: 270 PPCATAAAINSGEFFHPHRPHKFQ*CLLARTPP*IATEPAIVIDAGLSGLAAATKIASHN 91
           P    + +I+S    H  +P       L+ +PP       +VI AGL+GLAAAT + S N
Sbjct: 6   PTSMLSYSIHSHRRLHLFKPKSSSSISLSLSPPKPTQTSVVVIGAGLAGLAAATHLRSKN 65

Query: 90  IPFIILEASDAVGGRVHTDTVDDFLLDRGF 1
           IPFI+LEASD VGGRV TD VD FLLDRGF
Sbjct: 66  IPFILLEASDGVGGRVRTDLVDGFLLDRGF 95


>ref|XP_003524753.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like
           [Glycine max]
          Length = 476

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/61 (68%), Positives = 48/61 (78%)
 Frame = -1

Query: 183 RTPP*IATEPAIVIDAGLSGLAAATKIASHNIPFIILEASDAVGGRVHTDTVDDFLLDRG 4
           ++PP   T   IVI AGL+GLAAAT + S NIPF++LEASDAVGGRV TD VD FLLDRG
Sbjct: 41  QSPPLPKTTGVIVIGAGLAGLAAATHLNSQNIPFLLLEASDAVGGRVRTDIVDGFLLDRG 100

Query: 3   F 1
           F
Sbjct: 101 F 101


>ref|XP_002515342.1| amine oxidase, putative [Ricinus communis]
           gi|223545286|gb|EEF46791.1| amine oxidase, putative
           [Ricinus communis]
          Length = 481

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = -1

Query: 150 IVIDAGLSGLAAATKIASHNIPFIILEASDAVGGRVHTDTVDDFLLDRGF 1
           IVI AGL+GLAAAT++ S N+PFI+LEASD VGGRV TD VD F+LDRGF
Sbjct: 56  IVIGAGLAGLAAATRLNSENVPFILLEASDGVGGRVRTDIVDGFILDRGF 105


>ref|XP_002266648.1| PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic
           [Vitis vinifera] gi|296081484|emb|CBI20007.3| unnamed
           protein product [Vitis vinifera]
          Length = 463

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = -1

Query: 150 IVIDAGLSGLAAATKIASHNIPFIILEASDAVGGRVHTDTVDDFLLDRGF 1
           +VI AGL+GLAAAT++ S NIPF++LEASDAVGGRV TD V  FLLDRGF
Sbjct: 43  VVIGAGLAGLAAATRLHSENIPFLVLEASDAVGGRVRTDPVAGFLLDRGF 92


Top