BLASTX nr result

ID: Bupleurum21_contig00003842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003842
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512...   153   1e-49
ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...   151   3e-49
ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|1...   151   4e-49
gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]                150   6e-49
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   150   1e-48

>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  153 bits (386), Expect(2) = 1e-49
 Identities = 75/91 (82%), Positives = 82/91 (90%)
 Frame = -3

Query: 576 APKKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKR 397
           A KKITLKSSDGE FEV++ VALESQTIKHMIEDDCAD+GIPLPNVTSKILSKVIEYCK+
Sbjct: 3   AGKKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKK 62

Query: 396 HVEAPTGEDRAPTADDDLKNFDAEFVRVDQA 304
           HVE P  EDR  +ADDDLK +DAEFV+VDQA
Sbjct: 63  HVETPKSEDRPSSADDDLKAWDAEFVKVDQA 93



 Score = 69.7 bits (169), Expect(2) = 1e-49
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = -1

Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84
           QTVADMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
           gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
           protein 1B-like [Cucumis sativus]
          Length = 157

 Score =  151 bits (382), Expect(2) = 3e-49
 Identities = 72/89 (80%), Positives = 82/89 (92%)
 Frame = -3

Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391
           +KITLKSSDGE+FEVD+AVALESQTIKHMIEDDCAD+GIPLPNV SKILSKVIEYCK+HV
Sbjct: 5   RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 64

Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304
           E+P  EDR  + DDDLK +D+EFV+VDQA
Sbjct: 65  ESPKPEDRTGSVDDDLKTWDSEFVKVDQA 93



 Score = 69.7 bits (169), Expect(2) = 3e-49
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = -1

Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84
           QTVADMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|118485200|gb|ABK94461.1|
           unknown [Populus trichocarpa]
           gi|222843680|gb|EEE81227.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score =  151 bits (381), Expect(2) = 4e-49
 Identities = 72/89 (80%), Positives = 81/89 (91%)
 Frame = -3

Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391
           +K TLKSSDGE FEVD+AVALESQTIKHMIE+DCADN IPLPNVTSKILSKVIEYCK+HV
Sbjct: 5   RKFTLKSSDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYCKKHV 64

Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304
           E P  +DR  +ADDDLK++DAEFV+VDQA
Sbjct: 65  ETPKSDDRPSSADDDLKSWDAEFVKVDQA 93



 Score = 69.7 bits (169), Expect(2) = 4e-49
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = -1

Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84
           QTVADMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
          Length = 157

 Score =  150 bits (380), Expect(2) = 6e-49
 Identities = 73/89 (82%), Positives = 81/89 (91%)
 Frame = -3

Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391
           +KITLKSSDGE  EVD+AVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCK+HV
Sbjct: 5   RKITLKSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64

Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304
            AP  EDRA + DD+LK +DA+FV+VDQA
Sbjct: 65  GAPKAEDRASSVDDELKAWDADFVKVDQA 93



 Score = 69.7 bits (169), Expect(2) = 6e-49
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = -1

Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84
           QTVADMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  150 bits (378), Expect(2) = 1e-48
 Identities = 72/89 (80%), Positives = 80/89 (89%)
 Frame = -3

Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391
           +KITLKSSDGE FEVD+AVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCK+HV
Sbjct: 5   RKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64

Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304
           E    +DR  + DD+LK +DAEFV+VDQA
Sbjct: 65  ETSKSDDRPSSVDDELKTWDAEFVKVDQA 93



 Score = 69.7 bits (169), Expect(2) = 1e-48
 Identities = 34/42 (80%), Positives = 34/42 (80%)
 Frame = -1

Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84
           QTVADMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


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