BLASTX nr result
ID: Bupleurum21_contig00003842
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00003842 (662 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512... 153 1e-49 ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi... 151 3e-49 ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|1... 151 4e-49 gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus] 150 6e-49 ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512... 150 1e-48 >ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1, putative [Ricinus communis] Length = 157 Score = 153 bits (386), Expect(2) = 1e-49 Identities = 75/91 (82%), Positives = 82/91 (90%) Frame = -3 Query: 576 APKKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKR 397 A KKITLKSSDGE FEV++ VALESQTIKHMIEDDCAD+GIPLPNVTSKILSKVIEYCK+ Sbjct: 3 AGKKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKK 62 Query: 396 HVEAPTGEDRAPTADDDLKNFDAEFVRVDQA 304 HVE P EDR +ADDDLK +DAEFV+VDQA Sbjct: 63 HVETPKSEDRPSSADDDLKAWDAEFVKVDQA 93 Score = 69.7 bits (169), Expect(2) = 1e-49 Identities = 34/42 (80%), Positives = 34/42 (80%) Frame = -1 Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84 QTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157 >ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus] gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus] Length = 157 Score = 151 bits (382), Expect(2) = 3e-49 Identities = 72/89 (80%), Positives = 82/89 (92%) Frame = -3 Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391 +KITLKSSDGE+FEVD+AVALESQTIKHMIEDDCAD+GIPLPNV SKILSKVIEYCK+HV Sbjct: 5 RKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCADSGIPLPNVNSKILSKVIEYCKKHV 64 Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304 E+P EDR + DDDLK +D+EFV+VDQA Sbjct: 65 ESPKPEDRTGSVDDDLKTWDSEFVKVDQA 93 Score = 69.7 bits (169), Expect(2) = 3e-49 Identities = 34/42 (80%), Positives = 34/42 (80%) Frame = -1 Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84 QTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157 >ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|118485200|gb|ABK94461.1| unknown [Populus trichocarpa] gi|222843680|gb|EEE81227.1| predicted protein [Populus trichocarpa] Length = 157 Score = 151 bits (381), Expect(2) = 4e-49 Identities = 72/89 (80%), Positives = 81/89 (91%) Frame = -3 Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391 +K TLKSSDGE FEVD+AVALESQTIKHMIE+DCADN IPLPNVTSKILSKVIEYCK+HV Sbjct: 5 RKFTLKSSDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYCKKHV 64 Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304 E P +DR +ADDDLK++DAEFV+VDQA Sbjct: 65 ETPKSDDRPSSADDDLKSWDAEFVKVDQA 93 Score = 69.7 bits (169), Expect(2) = 4e-49 Identities = 34/42 (80%), Positives = 34/42 (80%) Frame = -1 Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84 QTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157 >gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus] Length = 157 Score = 150 bits (380), Expect(2) = 6e-49 Identities = 73/89 (82%), Positives = 81/89 (91%) Frame = -3 Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391 +KITLKSSDGE EVD+AVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCK+HV Sbjct: 5 RKITLKSSDGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304 AP EDRA + DD+LK +DA+FV+VDQA Sbjct: 65 GAPKAEDRASSVDDELKAWDADFVKVDQA 93 Score = 69.7 bits (169), Expect(2) = 6e-49 Identities = 34/42 (80%), Positives = 34/42 (80%) Frame = -1 Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84 QTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157 >ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1, putative [Ricinus communis] Length = 157 Score = 150 bits (378), Expect(2) = 1e-48 Identities = 72/89 (80%), Positives = 80/89 (89%) Frame = -3 Query: 570 KKITLKSSDGEVFEVDQAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKRHV 391 +KITLKSSDGE FEVD+AVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCK+HV Sbjct: 5 RKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV 64 Query: 390 EAPTGEDRAPTADDDLKNFDAEFVRVDQA 304 E +DR + DD+LK +DAEFV+VDQA Sbjct: 65 ETSKSDDRPSSVDDELKTWDAEFVKVDQA 93 Score = 69.7 bits (169), Expect(2) = 1e-48 Identities = 34/42 (80%), Positives = 34/42 (80%) Frame = -1 Query: 209 QTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 84 QTVADMIKGKTPEEIRKTFNIKNDFTP ENQWAFE Sbjct: 116 QTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157