BLASTX nr result

ID: Bupleurum21_contig00003833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003833
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28022.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   124   6e-27
emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]   124   6e-27
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   114   6e-24
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   113   2e-23

>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 TEIRFARWNNANAEKFNRQQRTQKQIEDELRFTKRFNSAQNIAENYNDDDSVSTTTVSND 242
           +E+RF+RWNNANAE+F  ++R QK+IED +R  +RF+SA  IA+   DD   S    +  
Sbjct: 23  SEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIAD--IDDAGTSKEAAAAG 80

Query: 241 NFKSTGTPSVPSRXXXXXXXXXXXXXXKNLHPAFKTNVKIRKL--PEASEAAETGIKIGD 68
            FKSTGTPS PS+              K  HPAF+   +  KL  P  S  A+ GI IG+
Sbjct: 81  TFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGISIGE 140

Query: 67  NGVSYVIPEAPFEFQYSYTETP 2
           +GVSY++P  PFE +YSYTETP
Sbjct: 141 DGVSYMVPGVPFELRYSYTETP 162


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 TEIRFARWNNANAEKFNRQQRTQKQIEDELRFTKRFNSAQNIAENYNDDDSVSTTTVSND 242
           +E+RF+RWNNANAE+F  ++R QK+IED +R  +RF+SA  IA+   DD   S    +  
Sbjct: 23  SEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIAD--IDDAGTSKEAAAAG 80

Query: 241 NFKSTGTPSVPSRXXXXXXXXXXXXXXKNLHPAFKTNVKIRKL--PEASEAAETGIKIGD 68
            FKSTGTPS PS+              K  HPAF+   +  KL  P  S  A+ GI IG+
Sbjct: 81  TFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGISIGE 140

Query: 67  NGVSYVIPEAPFEFQYSYTETP 2
           +GVSY++P  PFE +YSYTETP
Sbjct: 141 DGVSYMVPGVPFELRYSYTETP 162


>emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
          Length = 393

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 TEIRFARWNNANAEKFNRQQRTQKQIEDELRFTKRFNSAQNIAENYNDDDSVSTTTVSND 242
           +E+RF+RWNNANAE+F  ++R QK+IED +R  +RF+SA  IA+   DD   S    +  
Sbjct: 23  SEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIAD--IDDAGTSKEAAAAG 80

Query: 241 NFKSTGTPSVPSRXXXXXXXXXXXXXXKNLHPAFKTNVKIRKL--PEASEAAETGIKIGD 68
            FKSTGTPS PS+              K  HPAF+   +  KL  P  S  A+ GI IG+
Sbjct: 81  TFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGISIGE 140

Query: 67  NGVSYVIPEAPFEFQYSYTETP 2
           +GVSY++P  PFE +YSYTETP
Sbjct: 141 DGVSYMVPGVPFELRYSYTETP 162


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
           gi|223524018|gb|EEF27274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 748

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
 Frame = -1

Query: 421 TEIRFARWNNANAEKFNRQQRTQKQIEDELRFTKRFNSAQNIAENYNDDDSVSTTTVSND 242
           ++I F+RWNNANA +FN ++R QK+IE+++R  +RFNSA NI +NY+       +  SN+
Sbjct: 32  SDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANIIDNYD-------SATSNE 84

Query: 241 NF--KSTGTPSVPS--RXXXXXXXXXXXXXXKNLHPAFKTNVKIRK--LPEASEAAETGI 80
           NF  KS GTPS PS                  + HPAF++  KI K  LPE        +
Sbjct: 85  NFKSKSIGTPSSPSAPSIPGRKSKYSKPESPTSHHPAFRSISKITKKPLPEKPIDRNADV 144

Query: 79  KIGDNGVSYVIPEAPFEFQYSYTETP 2
           K+ ++G+S+V+  APFEF+YSYTETP
Sbjct: 145 KLSEDGLSFVVDGAPFEFKYSYTETP 170


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
           CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus]
          Length = 745

 Score =  113 bits (282), Expect = 2e-23
 Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 5/145 (3%)
 Frame = -1

Query: 421 TEIRFARWNNANAEKFNRQQRTQKQIEDELRFTKRFNSAQNIAENYNDDDSVSTTTVSND 242
           TEIRF+RW NANAEKF +++R+Q++IEDE+R  +RF+SA  I +   D DS S+    N+
Sbjct: 28  TEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAAKIVD-LCDSDSPSSAIDRNE 86

Query: 241 NFKSTGTPSVPSRXXXXXXXXXXXXXXKNLHPA-FKTNVKIRKLPEASE----AAETGIK 77
            F+S GTPS PSR                  P+ F+   K +K   A E      E  + 
Sbjct: 87  TFRSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSPFRQVSKTKKTMNAPEERHIGVEANVS 146

Query: 76  IGDNGVSYVIPEAPFEFQYSYTETP 2
           + ++GVSYVI  APFEF+YSYTETP
Sbjct: 147 LSEDGVSYVIDGAPFEFKYSYTETP 171


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