BLASTX nr result

ID: Bupleurum21_contig00003832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003832
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...   103   3e-20
emb|CBI24688.3| unnamed protein product [Vitis vinifera]               87   4e-15
emb|CBI27498.3| unnamed protein product [Vitis vinifera]               86   1e-14
emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera]    84   3e-14
emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    83   6e-14

>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score =  103 bits (258), Expect = 3e-20
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
 Frame = +2

Query: 41  KQAKNRYDYTKYKYQAWCRLKNKTGNIYDASTNMFNLSEEEWKQEIQVNPKAESLKTSPL 220
           KQ KN +DY K +Y  W ++   TG+ Y++ T  F+   E+W++ +Q  P+A+  +  PL
Sbjct: 90  KQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPL 149

Query: 221 LFPDLCTQLFDGVTATGINSWGPTSSKNRVDSTNEPGLHDIGDNHEDTQDQEFADQSNNS 400
              +    LF GV ATG  +W   SS   + S  E                   + S +S
Sbjct: 150 ANMEELEALFGGVLATGSKNW---SSGGVIASGAE-------------------ESSTHS 187

Query: 401 NRVFEEAIPDVQENKGV---SSDETQRPKKKSKQVVNQSNSLIEEQMSKALEIIVQKHNG 571
             +  E    ++E++ +   ++DE +  KKK K+   + N   +E+M++ + ++ +   G
Sbjct: 188 TSMPSETSISLEEDENLPRNTNDEAEGSKKKQKKGKKEQN---QEEMNRIINVL-ENFEG 243

Query: 572 PTNKDCKEKLKSLGWSPDNPLYHLALGIFCESASHREAWMNLDEDE 709
           P+ K+C + LK L  + ++PLY++A+  FC+   +RE W+ ++ DE
Sbjct: 244 PSVKECMKILKKL-LTYEDPLYYVAINGFCKKKEYREVWVEMESDE 288


>emb|CBI24688.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 57/213 (26%), Positives = 104/213 (48%)
 Frame = +2

Query: 71  KYKYQAWCRLKNKTGNIYDASTNMFNLSEEEWKQEIQVNPKAESLKTSPLLFPDLCTQLF 250
           K +Y  W ++   TG+ Y++ T  F+   E+W++ +Q   +A+  +  PL   +    LF
Sbjct: 2   KRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYSEAKQFRFKPLANVEELEALF 61

Query: 251 DGVTATGINSWGPTSSKNRVDSTNEPGLHDIGDNHEDTQDQEFADQSNNSNRVFEEAIPD 430
            GV ATG  +W   SS+  + S  E         H  +   E          +  E   D
Sbjct: 62  GGVLATGSKNW---SSRGVIASGAEE-----SSTHSTSMPSE--------TSISLEEDED 105

Query: 431 VQENKGVSSDETQRPKKKSKQVVNQSNSLIEEQMSKALEIIVQKHNGPTNKDCKEKLKSL 610
           + +N    ++ +++ +KK K+   Q      E+M + + ++ +   GPT K+C + LK L
Sbjct: 106 LPKNTNDEAEGSKKIQKKGKKEQTQ------EEMYRIVNVL-ENFEGPTVKECMKILKRL 158

Query: 611 GWSPDNPLYHLALGIFCESASHREAWMNLDEDE 709
             + ++PLY++A+  FC+   +RE WM ++ DE
Sbjct: 159 -LTYEDPLYYVAINAFCKKKEYREVWMEMESDE 190


>emb|CBI27498.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 54/200 (27%), Positives = 100/200 (50%)
 Frame = +2

Query: 110 TGNIYDASTNMFNLSEEEWKQEIQVNPKAESLKTSPLLFPDLCTQLFDGVTATGINSWGP 289
           TG+ Y++ T  F+   E+W++ +Q  P+A+  +  PL   +    LF+GV ATG  +W  
Sbjct: 2   TGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPLANVEELEALFEGVLATGSKNW-- 59

Query: 290 TSSKNRVDSTNEPGLHDIGDNHEDTQDQEFADQSNNSNRVFEEAIPDVQENKGVSSDETQ 469
                     +  G+   G     T       +++    +  E   D+  N   ++DE +
Sbjct: 60  ----------SSGGVMASGAEESSTHSTSMPSETS----ISLEEDEDLPRN---TNDEAE 102

Query: 470 RPKKKSKQVVNQSNSLIEEQMSKALEIIVQKHNGPTNKDCKEKLKSLGWSPDNPLYHLAL 649
             KKK K+   +     +E+M++ + ++ +   GPT K+C + LK L  + ++PLY++A+
Sbjct: 103 GSKKKQKKGKKEQT---QEEMNRIVNVL-ENFEGPTVKECMKILKRL-LTYEDPLYYVAI 157

Query: 650 GIFCESASHREAWMNLDEDE 709
             FC+   +RE WM ++ DE
Sbjct: 158 NAFCKKKEYREVWMEMESDE 177


>emb|CAN75599.1| hypothetical protein VITISV_025756 [Vitis vinifera]
          Length = 251

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
 Frame = +2

Query: 41  KQAKNRYDYTKYKYQAWCRLKNKTGNIYDASTNMFNLSEEEWKQEIQVNPKAESLKTSPL 220
           KQ KN  DY K +Y  W ++   TG+ Y++ T  F+   E+W++ +Q             
Sbjct: 62  KQLKNGXDYMKRQYLIWXKMMTMTGHGYNSVTKTFDWPAEKWEEYLQA------------ 109

Query: 221 LFPDLCTQLFDGVTATGINSW---GPTSSKNRVDSTNEPGLHDIGDNHEDTQDQEFADQS 391
                   LF GV ATG  +W   G  +S     ST+   +     +      +E  D  
Sbjct: 110 --------LFGGVLATGSKNWSSGGVIASXAEESSTHSTSM----PSXTSISLEEDEDLP 157

Query: 392 NNSNRVFEEAIPDVQENKGVSSDETQRPKKKSKQVVNQSNSLIEEQMSKALEIIVQKHNG 571
            N+N                  DE +  KKK K+   +     +E+M++   ++ +   G
Sbjct: 158 RNTN------------------DEAEGSKKKQKKGKKEQT---QEEMNRIXNVL-ENFEG 195

Query: 572 PTNKDCKEKLKSLGWSPDNPLYHLALGIFCESASHREAWMNLDEDE 709
           P+ K+C + LK L  + ++PLY++A+  FC+   +RE WM ++ DE
Sbjct: 196 PSVKECMKILKRL-LTYEDPLYYVAINAFCKKKEYREVWMEMESDE 240


>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 56/203 (27%), Positives = 100/203 (49%)
 Frame = +2

Query: 41  KQAKNRYDYTKYKYQAWCRLKNKTGNIYDASTNMFNLSEEEWKQEIQVNPKAESLKTSPL 220
           KQ KN +DY K +Y  W ++   TG+ Y++ T  F+   E+W++ +Q  P+A+  +  PL
Sbjct: 62  KQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRFKPL 121

Query: 221 LFPDLCTQLFDGVTATGINSWGPTSSKNRVDSTNEPGLHDIGDNHEDTQDQEFADQSNNS 400
              +    LF GV ATG  +W            +  G+   G     T       +++  
Sbjct: 122 ANVEELEALFGGVLATGSKNW------------SSGGVIASGAEESSTHSTSMPSETS-- 167

Query: 401 NRVFEEAIPDVQENKGVSSDETQRPKKKSKQVVNQSNSLIEEQMSKALEIIVQKHNGPTN 580
             +  E   D+  N   ++DET+  KKK K+   +     +E+M + + ++ +   GPT 
Sbjct: 168 --ISLEEDEDLPRN---TNDETEGSKKKQKKGKKEQT---QEEMYRIVNVL-ENFEGPTV 218

Query: 581 KDCKEKLKSLGWSPDNPLYHLAL 649
           K+C + LK L  + ++PLY++A+
Sbjct: 219 KECMKILKRL-LTYEDPLYYVAI 240


Top