BLASTX nr result

ID: Bupleurum21_contig00003824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003824
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz...   225   3e-57
gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japo...   225   3e-57
gb|EEC69828.1| hypothetical protein OsI_00149 [Oryza sativa Indi...   225   3e-57
ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helica...   222   2e-56
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   222   3e-56

>dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
           Group]
          Length = 1063

 Score =  225 bits (573), Expect = 3e-57
 Identities = 109/139 (78%), Positives = 123/139 (88%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   YPVRSHFLE----MTGYRLTTYNQIDNYGHDKMWKMQKQNIKKRKSQIASAVEDTLEAID 168
           YPVRS FLE    +TG+RLT YNQID+YG +K WKMQKQ ++KRKSQIAS VEDT++A D
Sbjct: 343 YPVRSRFLEDILEITGHRLTPYNQIDDYGQEKSWKMQKQALRKRKSQIASVVEDTVQAAD 402

Query: 169 LKDYSLRTQDSLSCWNPDSIGFNLIEHVLCHICTKERSGAVLVFMTGLDDINSLKGQLQA 348
           L+DYS RT+DSLSCWNPDSIGFNLIE+VLCHIC KER+GAVLVFMTG DDIN+LK QLQA
Sbjct: 403 LRDYSARTRDSLSCWNPDSIGFNLIENVLCHICQKERAGAVLVFMTGWDDINALKEQLQA 462

Query: 349 HPLLGDPSKVLLLGCHGSM 405
           +PLLGDPSKVLLL CHGSM
Sbjct: 463 NPLLGDPSKVLLLACHGSM 481


>gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japonica Group]
          Length = 1700

 Score =  225 bits (573), Expect = 3e-57
 Identities = 109/139 (78%), Positives = 123/139 (88%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1    YPVRSHFLE----MTGYRLTTYNQIDNYGHDKMWKMQKQNIKKRKSQIASAVEDTLEAID 168
            YPVRS FLE    +TG+RLT YNQID+YG +K WKMQKQ ++KRKSQIAS VEDT++A D
Sbjct: 980  YPVRSRFLEDILEITGHRLTPYNQIDDYGQEKSWKMQKQALRKRKSQIASVVEDTVQAAD 1039

Query: 169  LKDYSLRTQDSLSCWNPDSIGFNLIEHVLCHICTKERSGAVLVFMTGLDDINSLKGQLQA 348
            L+DYS RT+DSLSCWNPDSIGFNLIE+VLCHIC KER+GAVLVFMTG DDIN+LK QLQA
Sbjct: 1040 LRDYSARTRDSLSCWNPDSIGFNLIENVLCHICQKERAGAVLVFMTGWDDINALKEQLQA 1099

Query: 349  HPLLGDPSKVLLLGCHGSM 405
            +PLLGDPSKVLLL CHGSM
Sbjct: 1100 NPLLGDPSKVLLLACHGSM 1118


>gb|EEC69828.1| hypothetical protein OsI_00149 [Oryza sativa Indica Group]
          Length = 1680

 Score =  225 bits (573), Expect = 3e-57
 Identities = 109/139 (78%), Positives = 123/139 (88%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1    YPVRSHFLE----MTGYRLTTYNQIDNYGHDKMWKMQKQNIKKRKSQIASAVEDTLEAID 168
            YPVRS FLE    +TG+RLT YNQID+YG +K WKMQKQ ++KRKSQIAS VEDT++A D
Sbjct: 960  YPVRSRFLEDILEITGHRLTPYNQIDDYGQEKSWKMQKQALRKRKSQIASVVEDTVQAAD 1019

Query: 169  LKDYSLRTQDSLSCWNPDSIGFNLIEHVLCHICTKERSGAVLVFMTGLDDINSLKGQLQA 348
            L+DYS RT+DSLSCWNPDSIGFNLIE+VLCHIC KER+GAVLVFMTG DDIN+LK QLQA
Sbjct: 1020 LRDYSARTRDSLSCWNPDSIGFNLIENVLCHICQKERAGAVLVFMTGWDDINALKEQLQA 1079

Query: 349  HPLLGDPSKVLLLGCHGSM 405
            +PLLGDPSKVLLL CHGSM
Sbjct: 1080 NPLLGDPSKVLLLACHGSM 1098


>ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
           [Brachypodium distachyon]
          Length = 1247

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/139 (77%), Positives = 122/139 (87%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   YPVRSHFLE----MTGYRLTTYNQIDNYGHDKMWKMQKQNIKKRKSQIASAVEDTLEAID 168
           YPVRS FLE    +TG+RLT+YNQID+YG +K WKMQKQ I+KRKSQIAS VED ++A D
Sbjct: 525 YPVRSRFLEDILEVTGHRLTSYNQIDDYGQEKSWKMQKQAIRKRKSQIASVVEDAVKAAD 584

Query: 169 LKDYSLRTQDSLSCWNPDSIGFNLIEHVLCHICTKERSGAVLVFMTGLDDINSLKGQLQA 348
           L+DYS RT+DSLSCWNPDSIGFNLIE+VLCHIC KER GAVLVFMTG DDIN+LK QLQA
Sbjct: 585 LRDYSSRTRDSLSCWNPDSIGFNLIENVLCHICQKERDGAVLVFMTGWDDINALKEQLQA 644

Query: 349 HPLLGDPSKVLLLGCHGSM 405
           +PLLGDP+KVLLL CHGSM
Sbjct: 645 NPLLGDPNKVLLLACHGSM 663


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/139 (77%), Positives = 118/139 (84%), Gaps = 4/139 (2%)
 Frame = +1

Query: 1   YPVRSHFLE----MTGYRLTTYNQIDNYGHDKMWKMQKQNIKKRKSQIASAVEDTLEAID 168
           YPVR+HFLE    MTGYRLT YNQID+YG +K+WKMQKQ ++KRKSQIAS+VED LE  +
Sbjct: 463 YPVRTHFLENILEMTGYRLTPYNQIDDYGQEKVWKMQKQALRKRKSQIASSVEDALEVAN 522

Query: 169 LKDYSLRTQDSLSCWNPDSIGFNLIEHVLCHICTKERSGAVLVFMTGLDDINSLKGQLQA 348
              YS RTQDSLSCWNPDSIGFNLIEH LCHI  KER GAVLVFMTG DDINSLK QL+A
Sbjct: 523 FDAYSPRTQDSLSCWNPDSIGFNLIEHALCHIVKKERPGAVLVFMTGWDDINSLKDQLEA 582

Query: 349 HPLLGDPSKVLLLGCHGSM 405
           HPLLGDPS+VLLL CHGSM
Sbjct: 583 HPLLGDPSRVLLLACHGSM 601


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