BLASTX nr result

ID: Bupleurum21_contig00003823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003823
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   218   4e-55
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helica...   213   1e-53
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz...   212   3e-53

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/135 (80%), Positives = 114/135 (84%)
 Frame = +1

Query: 1   SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180
           SVG+KVRLEGMKGRDTRLLFCTTGILLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV
Sbjct: 362 SVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 421

Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360
                          MSATLNA+LFSSYF  AP IHIPGFTYPVR+HFLENILEMTGYRL
Sbjct: 422 LKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEMTGYRL 481

Query: 361 TTYNQIDNYGHDKMW 405
           T YNQID+YG +K+W
Sbjct: 482 TPYNQIDDYGQEKVW 496


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  218 bits (555), Expect = 4e-55
 Identities = 108/135 (80%), Positives = 114/135 (84%)
 Frame = +1

Query: 1   SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180
           SVG+KVRLEGMKGRDTRLLFCTTGILLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV
Sbjct: 241 SVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 300

Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360
                          MSATLNA+LFSSYF  AP IHIPGFTYPVR+HFLENILEMTGYRL
Sbjct: 301 LKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEMTGYRL 360

Query: 361 TTYNQIDNYGHDKMW 405
           T YNQID+YG +K+W
Sbjct: 361 TPYNQIDDYGQEKVW 375


>ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
           [Brachypodium distachyon]
          Length = 1247

 Score =  213 bits (543), Expect = 1e-53
 Identities = 105/135 (77%), Positives = 114/135 (84%)
 Frame = +1

Query: 1   SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180
           SVG+KVRLEGM+GRDTRLLFCTTG+LLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV
Sbjct: 424 SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIV 483

Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360
                          MSATLNADLFSSYF  APMIHIPGFTYPVRS FLE+ILE+TG+RL
Sbjct: 484 LKDLLPRRPELRLVLMSATLNADLFSSYFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRL 543

Query: 361 TTYNQIDNYGHDKMW 405
           T+YNQID+YG +K W
Sbjct: 544 TSYNQIDDYGQEKSW 558


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  213 bits (543), Expect = 1e-53
 Identities = 105/135 (77%), Positives = 113/135 (83%)
 Frame = +1

Query: 1   SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180
           SVG+KVRLEGM+GRDTRLLFCTTGILLRRLL+DR LKGVTHVIVDEIHERGMNEDFLLIV
Sbjct: 242 SVGYKVRLEGMRGRDTRLLFCTTGILLRRLLLDRNLKGVTHVIVDEIHERGMNEDFLLIV 301

Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360
                          MSATLNA+LFSSYF  AP IHIPGFTYPVR+HFLENILE+TGYRL
Sbjct: 302 LRDLLPRRPELRLILMSATLNAELFSSYFGGAPAIHIPGFTYPVRAHFLENILEITGYRL 361

Query: 361 TTYNQIDNYGHDKMW 405
           T YNQID+YG +K W
Sbjct: 362 TPYNQIDDYGQEKTW 376


>dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
           Group]
          Length = 1063

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/135 (77%), Positives = 113/135 (83%)
 Frame = +1

Query: 1   SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180
           SVG+KVRLEGMKGRDTRLLFCTTG+LLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV
Sbjct: 242 SVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 301

Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360
                          MSATLNA+LFSSYF  APMIHIPGFTYPVRS FLE+ILE+TG+RL
Sbjct: 302 LKDLLPRRPELRLVLMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRL 361

Query: 361 TTYNQIDNYGHDKMW 405
           T YNQID+YG +K W
Sbjct: 362 TPYNQIDDYGQEKSW 376


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