BLASTX nr result
ID: Bupleurum21_contig00003823
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00003823 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica... 218 4e-55 emb|CBI15516.3| unnamed protein product [Vitis vinifera] 218 4e-55 ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helica... 213 1e-53 ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2... 213 1e-53 dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz... 212 3e-53 >ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis vinifera] Length = 1178 Score = 218 bits (555), Expect = 4e-55 Identities = 108/135 (80%), Positives = 114/135 (84%) Frame = +1 Query: 1 SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180 SVG+KVRLEGMKGRDTRLLFCTTGILLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV Sbjct: 362 SVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 421 Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360 MSATLNA+LFSSYF AP IHIPGFTYPVR+HFLENILEMTGYRL Sbjct: 422 LKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEMTGYRL 481 Query: 361 TTYNQIDNYGHDKMW 405 T YNQID+YG +K+W Sbjct: 482 TPYNQIDDYGQEKVW 496 >emb|CBI15516.3| unnamed protein product [Vitis vinifera] Length = 1057 Score = 218 bits (555), Expect = 4e-55 Identities = 108/135 (80%), Positives = 114/135 (84%) Frame = +1 Query: 1 SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180 SVG+KVRLEGMKGRDTRLLFCTTGILLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV Sbjct: 241 SVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 300 Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360 MSATLNA+LFSSYF AP IHIPGFTYPVR+HFLENILEMTGYRL Sbjct: 301 LKDLLPRRPELRLILMSATLNAELFSSYFGGAPSIHIPGFTYPVRTHFLENILEMTGYRL 360 Query: 361 TTYNQIDNYGHDKMW 405 T YNQID+YG +K+W Sbjct: 361 TPYNQIDDYGQEKVW 375 >ref|XP_003567582.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Brachypodium distachyon] Length = 1247 Score = 213 bits (543), Expect = 1e-53 Identities = 105/135 (77%), Positives = 114/135 (84%) Frame = +1 Query: 1 SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180 SVG+KVRLEGM+GRDTRLLFCTTG+LLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV Sbjct: 424 SVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEIHERGMNEDFLLIV 483 Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360 MSATLNADLFSSYF APMIHIPGFTYPVRS FLE+ILE+TG+RL Sbjct: 484 LKDLLPRRPELRLVLMSATLNADLFSSYFGGAPMIHIPGFTYPVRSRFLEDILEVTGHRL 543 Query: 361 TTYNQIDNYGHDKMW 405 T+YNQID+YG +K W Sbjct: 544 TSYNQIDDYGQEKSW 558 >ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1| predicted protein [Populus trichocarpa] Length = 1062 Score = 213 bits (543), Expect = 1e-53 Identities = 105/135 (77%), Positives = 113/135 (83%) Frame = +1 Query: 1 SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180 SVG+KVRLEGM+GRDTRLLFCTTGILLRRLL+DR LKGVTHVIVDEIHERGMNEDFLLIV Sbjct: 242 SVGYKVRLEGMRGRDTRLLFCTTGILLRRLLLDRNLKGVTHVIVDEIHERGMNEDFLLIV 301 Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360 MSATLNA+LFSSYF AP IHIPGFTYPVR+HFLENILE+TGYRL Sbjct: 302 LRDLLPRRPELRLILMSATLNAELFSSYFGGAPAIHIPGFTYPVRAHFLENILEITGYRL 361 Query: 361 TTYNQIDNYGHDKMW 405 T YNQID+YG +K W Sbjct: 362 TPYNQIDDYGQEKTW 376 >dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] Length = 1063 Score = 212 bits (539), Expect = 3e-53 Identities = 105/135 (77%), Positives = 113/135 (83%) Frame = +1 Query: 1 SVGFKVRLEGMKGRDTRLLFCTTGILLRRLLVDRMLKGVTHVIVDEIHERGMNEDFLLIV 180 SVG+KVRLEGMKGRDTRLLFCTTG+LLRRLLVDR LKGVTHVIVDEIHERGMNEDFLLIV Sbjct: 242 SVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIV 301 Query: 181 XXXXXXXXXXXXXXXMSATLNADLFSSYFSNAPMIHIPGFTYPVRSHFLENILEMTGYRL 360 MSATLNA+LFSSYF APMIHIPGFTYPVRS FLE+ILE+TG+RL Sbjct: 302 LKDLLPRRPELRLVLMSATLNAELFSSYFGGAPMIHIPGFTYPVRSRFLEDILEITGHRL 361 Query: 361 TTYNQIDNYGHDKMW 405 T YNQID+YG +K W Sbjct: 362 TPYNQIDDYGQEKSW 376