BLASTX nr result

ID: Bupleurum21_contig00003810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003810
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45492.1| unknown [Lotus japonicus]                               64   2e-08
ref|XP_003594056.1| hypothetical protein MTR_2g020830 [Medicago ...    62   1e-07
ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257...    61   2e-07
gb|ACU20551.1| unknown [Glycine max]                                   60   3e-07
ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|2...    59   7e-07

>gb|AFK45492.1| unknown [Lotus japonicus]
          Length = 180

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 7/64 (10%)
 Frame = -3

Query: 603 IVLGQVTILRRGESLDTKIK-ENQKSSGD-VTVYGTGRLGPDPKLVPKQVR-----FGLD 445
           +V+ +VTILRRGESLD++IK E  K  GD + V GT RLGPDP++VPKQ+R      G D
Sbjct: 75  LVMEKVTILRRGESLDSQIKSEALKREGDELVVVGTQRLGPDPEMVPKQIRIMDGQIGFD 134

Query: 444 TYAG 433
            YAG
Sbjct: 135 MYAG 138


>ref|XP_003594056.1| hypothetical protein MTR_2g020830 [Medicago truncatula]
           gi|355483104|gb|AES64307.1| hypothetical protein
           MTR_2g020830 [Medicago truncatula]
           gi|388506246|gb|AFK41189.1| unknown [Medicago
           truncatula]
          Length = 190

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
 Frame = -3

Query: 591 QVTILRRGESLDTKIKEN--QKSSGDVTVYGTGRLGPDPKLVPKQVRF-----GLDTYAG 433
           +VTILRRGESLD+ +K +  +K   D+ + GT RLGPDP +VPKQ+R      G D YAG
Sbjct: 90  KVTILRRGESLDSLVKSDGLKKEGEDLVIIGTQRLGPDPNMVPKQIRIVDFKTGCDVYAG 149


>ref|XP_002278692.1| PREDICTED: uncharacterized protein LOC100257948 [Vitis vinifera]
          Length = 188

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/52 (61%), Positives = 42/52 (80%), Gaps = 3/52 (5%)
 Frame = -3

Query: 603 IVLGQVTILRRGESLDTKIK-ENQKSSGD--VTVYGTGRLGPDPKLVPKQVR 457
           +V+G VTILRRGESLD+K+K E  K +G+  + V GT RLGPDP++VPKQ+R
Sbjct: 75  VVVGPVTILRRGESLDSKLKSEALKKNGEEEMIVSGTERLGPDPEMVPKQIR 126


>gb|ACU20551.1| unknown [Glycine max]
          Length = 187

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 7/60 (11%)
 Frame = -3

Query: 591 QVTILRRGESLDTKIK-ENQKSSGD-VTVYGTGRLGPDPKLVPKQVRF-----GLDTYAG 433
           +VTILRRGESLD+K+K E  K  GD + V GT RLGPDP +VPKQ+R      G + YAG
Sbjct: 79  KVTILRRGESLDSKLKTEALKKEGDNLVVVGTQRLGPDPDMVPKQIRIVDFRSGREIYAG 138


>ref|XP_002315543.1| predicted protein [Populus trichocarpa] gi|222864583|gb|EEF01714.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
 Frame = -3

Query: 600 VLGQVTILRRGESLDTKIKENQKSS--------GDVTVYGTGRLGPDPKLVPKQVR 457
           V+ +VTILRRGESLDTKIK +  +S        GD  V  T RLGPDPK+V KQ+R
Sbjct: 93  VMEKVTILRRGESLDTKIKSSDTASLKKEQGNGGDFVVASTDRLGPDPKVVSKQIR 148


Top