BLASTX nr result

ID: Bupleurum21_contig00003802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003802
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133776.1| PREDICTED: malate dehydrogenase, cytoplasmic...   588   e-166
emb|CAN77649.1| hypothetical protein VITISV_032320 [Vitis vinifera]   586   e-165
ref|XP_003626695.1| Malate dehydrogenase [Medicago truncatula] g...   585   e-165
ref|XP_004155195.1| PREDICTED: malate dehydrogenase, cytoplasmic...   582   e-164
ref|XP_003542332.1| PREDICTED: malate dehydrogenase, cytoplasmic...   571   e-160

>ref|XP_004133776.1| PREDICTED: malate dehydrogenase, cytoplasmic-like [Cucumis sativus]
          Length = 364

 Score =  588 bits (1517), Expect = e-166
 Identities = 290/359 (80%), Positives = 319/359 (88%)
 Frame = +1

Query: 4    ELAEQIAVLSGCFYLSWKIVKYVWSFLEVEDDPVTVLVTGAAGQIGYAIVPMIARGEMLG 183
            EL ++  V+S      WK+++Y+WSF+ +E +P+ VLVTGAAGQIGYAIVPMIARG MLG
Sbjct: 5    ELFQKFLVVSFTIAFFWKLIRYMWSFVSMEKEPIRVLVTGAAGQIGYAIVPMIARGVMLG 64

Query: 184  PNQPVILHLLDIEPAAEALNGVKMELIDAAFPLLKGVVATTNVVEACTDVDIAIMVGGFP 363
            P+QPVILH+LDIEPAAEALNGVKMELIDAAFPLLKGV+ATT+VVEAC +V+IA+MVGGFP
Sbjct: 65   PDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVIATTDVVEACKEVNIAVMVGGFP 124

Query: 364  RKDGMERKDVLSKNVSIYKAQASALEQHAASNCKVLVVANPANTNALILKEFAPSIPEDN 543
            RK+GMERKDV++KNVSIYK QASALEQHAA +CKVLVVANPANTNALILKEFAPSIPE N
Sbjct: 125  RKEGMERKDVMTKNVSIYKKQASALEQHAAPDCKVLVVANPANTNALILKEFAPSIPEKN 184

Query: 544  ITCLTRLDHNRALGQISERLNIQVNDVKNVIIWGNHSSTQYPDVNHATVSTDKGTKSVRE 723
            ITCLTRLDHNRALGQISERL + V+DV NVIIWGNHSSTQYPDVNHA V+T  G K VRE
Sbjct: 185  ITCLTRLDHNRALGQISERLKVHVSDVNNVIIWGNHSSTQYPDVNHAKVTTSSGEKPVRE 244

Query: 724  LVNNDNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGV 903
            LV +D WLNTEFI TVQQRGAAIIKARK           CDHIR+WVLGTPKGTWVSMGV
Sbjct: 245  LVADDQWLNTEFIATVQQRGAAIIKARKLSSALSAASAACDHIRNWVLGTPKGTWVSMGV 304

Query: 904  YSDGSYGIQPGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKSLAYSCL 1080
            YSDGSYGI+ GLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEK+LAYSCL
Sbjct: 305  YSDGSYGIERGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKALAYSCL 363


>emb|CAN77649.1| hypothetical protein VITISV_032320 [Vitis vinifera]
          Length = 361

 Score =  586 bits (1511), Expect = e-165
 Identities = 287/356 (80%), Positives = 316/356 (88%)
 Frame = +1

Query: 13   EQIAVLSGCFYLSWKIVKYVWSFLEVEDDPVTVLVTGAAGQIGYAIVPMIARGEMLGPNQ 192
            ++  V+  C YL W+I++Y+WSF  VE++PV VLVTG   QIGYA+VPMIARG MLGP+Q
Sbjct: 8    QKSVVVLVCVYLLWRIIRYIWSFPNVEEEPVIVLVTG---QIGYALVPMIARGLMLGPDQ 64

Query: 193  PVILHLLDIEPAAEALNGVKMELIDAAFPLLKGVVATTNVVEACTDVDIAIMVGGFPRKD 372
            PVILH+LDIEPAAEALNGVKMELIDAAFPLL+GVVATT+ +EAC DV+IA+MVGGFPRK+
Sbjct: 65   PVILHMLDIEPAAEALNGVKMELIDAAFPLLRGVVATTDAIEACKDVNIAVMVGGFPRKE 124

Query: 373  GMERKDVLSKNVSIYKAQASALEQHAASNCKVLVVANPANTNALILKEFAPSIPEDNITC 552
            GMERKD++ KNVSIYKAQASALEQHAA NCKVLVVANPANTNALILKEFAPSIPE N+TC
Sbjct: 125  GMERKDMMKKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPEKNVTC 184

Query: 553  LTRLDHNRALGQISERLNIQVNDVKNVIIWGNHSSTQYPDVNHATVSTDKGTKSVRELVN 732
            LTRLDHNRALGQISE+L + V DVKN IIWGNHSSTQYPDVNHATVST  G K VREL+ 
Sbjct: 185  LTRLDHNRALGQISEKLFVHVGDVKNAIIWGNHSSTQYPDVNHATVSTCNGEKPVRELIA 244

Query: 733  NDNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGVYSD 912
            +DNW+NTEFITTVQQRGAAIIKARK           CDHIRDWVLGTPKG WVSMGVYSD
Sbjct: 245  DDNWINTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGAWVSMGVYSD 304

Query: 913  GSYGIQPGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKSLAYSCL 1080
            GSYGIQPG+IYSFPVTCEKGEWSIVQGLKIDEFSR KMDATAKEL+EEK+LAYSCL
Sbjct: 305  GSYGIQPGIIYSFPVTCEKGEWSIVQGLKIDEFSRGKMDATAKELMEEKALAYSCL 360


>ref|XP_003626695.1| Malate dehydrogenase [Medicago truncatula]
            gi|355520717|gb|AET01171.1| Malate dehydrogenase
            [Medicago truncatula]
          Length = 413

 Score =  585 bits (1508), Expect = e-165
 Identities = 287/356 (80%), Positives = 318/356 (89%)
 Frame = +1

Query: 13   EQIAVLSGCFYLSWKIVKYVWSFLEVEDDPVTVLVTGAAGQIGYAIVPMIARGEMLGPNQ 192
            ++I ++  C +L WKI++Y+   L+VE +PVTVLVTGAAGQIGYA+VPMIARG MLGPNQ
Sbjct: 58   QKIVLVLVCTFLFWKIIRYMSDLLKVEKEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQ 117

Query: 193  PVILHLLDIEPAAEALNGVKMELIDAAFPLLKGVVATTNVVEACTDVDIAIMVGGFPRKD 372
            PVILH+LDIEPA EAL GVKMELIDAAFPLL+GVVATT+VVEAC DV+IA+MVGGFPRK+
Sbjct: 118  PVILHMLDIEPALEALKGVKMELIDAAFPLLRGVVATTDVVEACKDVNIAVMVGGFPRKE 177

Query: 373  GMERKDVLSKNVSIYKAQASALEQHAASNCKVLVVANPANTNALILKEFAPSIPEDNITC 552
            GMERKDV+SKNVSIYK QASALE+HAA+ CKVLV+ANPANTNALILKEFAPSIPE NITC
Sbjct: 178  GMERKDVMSKNVSIYKTQASALEEHAAAYCKVLVIANPANTNALILKEFAPSIPEKNITC 237

Query: 553  LTRLDHNRALGQISERLNIQVNDVKNVIIWGNHSSTQYPDVNHATVSTDKGTKSVRELVN 732
            LTRLDHNRALGQISE+LN+ V+DVKNVIIWGNHSSTQYPDVNHATV+T  G K VRELV 
Sbjct: 238  LTRLDHNRALGQISEKLNVDVSDVKNVIIWGNHSSTQYPDVNHATVATSNGKKHVRELVA 297

Query: 733  NDNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGVYSD 912
            +DNWLN+EFITTVQQRG AIIKARK           CDHI DWVLGTPKGTWVSMGVYSD
Sbjct: 298  DDNWLNSEFITTVQQRGGAIIKARKLSSALSAASAACDHIHDWVLGTPKGTWVSMGVYSD 357

Query: 913  GSYGIQPGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKSLAYSCL 1080
            GSYGIQPGLIYSFPVTC+KGEW+IVQGLKIDEFSR KMD TA+ELIEEK+LA SCL
Sbjct: 358  GSYGIQPGLIYSFPVTCDKGEWNIVQGLKIDEFSREKMDKTAQELIEEKALANSCL 413


>ref|XP_004155195.1| PREDICTED: malate dehydrogenase, cytoplasmic-like [Cucumis sativus]
          Length = 391

 Score =  582 bits (1500), Expect = e-164
 Identities = 287/356 (80%), Positives = 316/356 (88%)
 Frame = +1

Query: 4    ELAEQIAVLSGCFYLSWKIVKYVWSFLEVEDDPVTVLVTGAAGQIGYAIVPMIARGEMLG 183
            EL ++  V+S      WK+++Y+WSF+ +E +P+ VLVTGAAGQIGYAIVPMIARG MLG
Sbjct: 5    ELFQKFLVVSFTIAFFWKLIRYMWSFVSMEKEPIRVLVTGAAGQIGYAIVPMIARGVMLG 64

Query: 184  PNQPVILHLLDIEPAAEALNGVKMELIDAAFPLLKGVVATTNVVEACTDVDIAIMVGGFP 363
            P+QPVILH+LDIEPAAEALNGVKMELIDAAFPLLKGV+ATT+VVEAC +V+IA+MVGGFP
Sbjct: 65   PDQPVILHMLDIEPAAEALNGVKMELIDAAFPLLKGVIATTDVVEACKEVNIAVMVGGFP 124

Query: 364  RKDGMERKDVLSKNVSIYKAQASALEQHAASNCKVLVVANPANTNALILKEFAPSIPEDN 543
            RK+GMERKDV++KNVSIYK QASALEQHAA +CKVLVVANPANTNALILKEFAPSIPE N
Sbjct: 125  RKEGMERKDVMTKNVSIYKKQASALEQHAAPDCKVLVVANPANTNALILKEFAPSIPEKN 184

Query: 544  ITCLTRLDHNRALGQISERLNIQVNDVKNVIIWGNHSSTQYPDVNHATVSTDKGTKSVRE 723
            ITCLTRLDHNRALGQISERL + V+DV NVIIWGNHSSTQYPDVNHA V+T  G K VRE
Sbjct: 185  ITCLTRLDHNRALGQISERLKVHVSDVNNVIIWGNHSSTQYPDVNHAKVTTSSGEKPVRE 244

Query: 724  LVNNDNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGV 903
            LV +D WLNTEFI TVQQRGAAIIKARK           CDHIR+WVLGTPKGTWVSMGV
Sbjct: 245  LVADDQWLNTEFIATVQQRGAAIIKARKLSSALSAASAACDHIRNWVLGTPKGTWVSMGV 304

Query: 904  YSDGSYGIQPGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKSLAY 1071
            YSDGSYGI+ GLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEK+LAY
Sbjct: 305  YSDGSYGIERGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKALAY 360


>ref|XP_003542332.1| PREDICTED: malate dehydrogenase, cytoplasmic-like [Glycine max]
          Length = 373

 Score =  571 bits (1471), Expect = e-160
 Identities = 280/356 (78%), Positives = 317/356 (89%)
 Frame = +1

Query: 13   EQIAVLSGCFYLSWKIVKYVWSFLEVEDDPVTVLVTGAAGQIGYAIVPMIARGEMLGPNQ 192
            ++I ++  C  L  KIV+Y++S L+ E +P+T+LVTGAAGQIGYA+VPMIARG MLGPNQ
Sbjct: 17   KKIILVLFCIILFCKIVRYMFSLLKEEKEPITILVTGAAGQIGYALVPMIARGAMLGPNQ 76

Query: 193  PVILHLLDIEPAAEALNGVKMELIDAAFPLLKGVVATTNVVEACTDVDIAIMVGGFPRKD 372
            P+ILH+LDIEPA E+L G+KMELIDAA+PLL+GVVATT+VVEAC DV+I +MVGGFPRK+
Sbjct: 77   PMILHMLDIEPATESLKGLKMELIDAAYPLLRGVVATTDVVEACKDVNIVVMVGGFPRKE 136

Query: 373  GMERKDVLSKNVSIYKAQASALEQHAASNCKVLVVANPANTNALILKEFAPSIPEDNITC 552
            GMERKDV+SKNVSIYKAQASALEQHAA++CKVLVVANPANTNALILKEFAPSIPE NITC
Sbjct: 137  GMERKDVMSKNVSIYKAQASALEQHAATDCKVLVVANPANTNALILKEFAPSIPEKNITC 196

Query: 553  LTRLDHNRALGQISERLNIQVNDVKNVIIWGNHSSTQYPDVNHATVSTDKGTKSVRELVN 732
            LTRLDHNRALGQISERLN+ V+DVKNVI+WGNHSSTQYPDVNHATV+T+ G K VRELV 
Sbjct: 197  LTRLDHNRALGQISERLNVLVSDVKNVIVWGNHSSTQYPDVNHATVTTNSGEKPVRELVV 256

Query: 733  NDNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGVYSD 912
            +DNWLN EFITTVQQRGAAIIKARK           CDHIRDWVLGTPKG WVSMGVYSD
Sbjct: 257  DDNWLNNEFITTVQQRGAAIIKARKQSSALSAASAACDHIRDWVLGTPKGEWVSMGVYSD 316

Query: 913  GSYGIQPGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKSLAYSCL 1080
            GSYGI  GLIYSFPVTCE+G+W+IVQGLKID+FSR KMD TA+ELIEEK+LA SCL
Sbjct: 317  GSYGIPTGLIYSFPVTCERGDWNIVQGLKIDQFSREKMDKTAQELIEEKTLAKSCL 372


Top