BLASTX nr result

ID: Bupleurum21_contig00003761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003761
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310238.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002327799.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002266831.1| PREDICTED: protein PHYLLO, chloroplastic [Vi...    89   5e-16
emb|CAN72982.1| hypothetical protein VITISV_009033 [Vitis vinifera]    89   5e-16
ref|XP_003629418.1| Epoxide hydrolase [Medicago truncatula] gi|3...    85   7e-15

>ref|XP_002310238.1| predicted protein [Populus trichocarpa] gi|222853141|gb|EEE90688.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/76 (64%), Positives = 59/76 (77%)
 Frame = -3

Query: 230 MVNFVAIQKPLMKFLMKMAGVQTHLVEIKPGTIMNFWVPTETLNISENEKTFKTSENNIL 51
           MVN VA QKPL+  LMKMAGVQ H+VEI+PGT+MNFWVP ET  + + +K  K ++   L
Sbjct: 1   MVNLVAAQKPLLHGLMKMAGVQPHIVEIEPGTVMNFWVPNET--VKKPQKGEKKNDTPTL 58

Query: 50  VTKPNKPVVVLIHGFA 3
            TKPNKPVVVL+HGFA
Sbjct: 59  -TKPNKPVVVLVHGFA 73


>ref|XP_002327799.1| predicted protein [Populus trichocarpa] gi|222836884|gb|EEE75277.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = -3

Query: 230 MVNFVAIQKPLMKFLMKMAGVQTHLVEIKPGTIMNFWVPTETLNISENEKTFKTSENNIL 51
           MVN VA Q PL+  LMKMAGVQ H VEI+PGT+MNFWVP ET+   +  +  KT      
Sbjct: 1   MVNLVAAQTPLLHGLMKMAGVQPHRVEIEPGTVMNFWVPNETVKKPQKGEKNKTP----T 56

Query: 50  VTKPNKPVVVLIHGFA 3
           +TKPNKPV+VL+HGFA
Sbjct: 57  LTKPNKPVIVLVHGFA 72


>ref|XP_002266831.1| PREDICTED: protein PHYLLO, chloroplastic [Vitis vinifera]
          Length = 314

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = -3

Query: 230 MVNFVAIQKPLMKFLMKMAGVQTHLVEIKPGTIMNFWVPTETLNISENEKTFKTSENNIL 51
           MVN VA QKPL+  LMKMAGV+ H+VEI+PGT+MNFWVP ET+     EK  K  + + L
Sbjct: 1   MVNLVAAQKPLLHGLMKMAGVRPHMVEIEPGTVMNFWVPCETV-----EKPKKKGDISSL 55

Query: 50  VTKPNKPVVVLIHGFA 3
             KP KPVVVL+HGFA
Sbjct: 56  -RKPTKPVVVLVHGFA 70


>emb|CAN72982.1| hypothetical protein VITISV_009033 [Vitis vinifera]
          Length = 224

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = -3

Query: 230 MVNFVAIQKPLMKFLMKMAGVQTHLVEIKPGTIMNFWVPTETLNISENEKTFKTSENNIL 51
           MVN VA QKPL+  LMKMAGV+ H+VEI+PGT+MNFWVP ET+     EK  K  + + L
Sbjct: 1   MVNLVAAQKPLLHGLMKMAGVRPHMVEIEPGTVMNFWVPCETV-----EKPKKKGDISSL 55

Query: 50  VTKPNKPVVVLIHGFA 3
             KP KPVVVL+HGFA
Sbjct: 56  -RKPTKPVVVLVHGFA 70


>ref|XP_003629418.1| Epoxide hydrolase [Medicago truncatula] gi|355523440|gb|AET03894.1|
           Epoxide hydrolase [Medicago truncatula]
          Length = 314

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/76 (57%), Positives = 52/76 (68%)
 Frame = -3

Query: 230 MVNFVAIQKPLMKFLMKMAGVQTHLVEIKPGTIMNFWVPTETLNISENEKTFKTSENNIL 51
           MVN VA QKPLM  LMKMAG++ + VEI+ GT MNFWVP+ET+      K  K  E   +
Sbjct: 1   MVNLVAAQKPLMHGLMKMAGIRPYTVEIESGTTMNFWVPSETIT-----KPKKKEEKPKI 55

Query: 50  VTKPNKPVVVLIHGFA 3
             K NKPVVVL+HGFA
Sbjct: 56  TAKTNKPVVVLVHGFA 71


Top