BLASTX nr result

ID: Bupleurum21_contig00003757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003757
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]          98   8e-19
emb|CBI17259.3| unnamed protein product [Vitis vinifera]               96   3e-18
emb|CBI17247.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_003622506.1| TMV resistance protein N [Medicago truncatul...    93   3e-17
ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vi...    91   1e-16

>gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]
          Length = 630

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
 Frame = -1

Query: 415 NESDTVQAIVEHVTSQA--STKIDLEEYLVGIDAVVEEIYQKLRMELNDVRVIGICGMGG 242
           +ES  V  IVEH++ +   ST +D+ EY VGI   V  I   L +E+ DV ++GI G+GG
Sbjct: 160 SESSIVGKIVEHISKEHVNSTDLDVAEYQVGIQHRVRAIQNLLGVEVRDVHMVGIWGVGG 219

Query: 241 IGKTTTAKAFYNKYSHIFDISCFVENVNQYLQESNPXXXXXXXXXXXXLRRKNYEVSNVE 62
           IGKTT AKA YN   H FD SCF+ENV +  + +              L+ +  EV++V 
Sbjct: 220 IGKTTIAKAVYNSIVHRFDGSCFLENVRENSKGARGLVELQKILLREILKEREVEVTSVA 279

Query: 61  SGIRQLQHILNRKKALIILD 2
            GI  ++  L  K+ L++LD
Sbjct: 280 RGINMIKERLQYKRVLLVLD 299


>emb|CBI17259.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
 Frame = -1

Query: 412 ESDTVQAIVEHVTSQASTK-IDLEEYLVGIDAVVEEIYQKLRME-LNDVRVIGICGMGGI 239
           ES  V  IV H+    + + +D+ + LVG+D+ VEEI ++L ++ LNDVR+IGICG+GG+
Sbjct: 28  ESKHVNKIVNHIFRTLNCRMLDVGDNLVGMDSHVEEIIRRLCVDQLNDVRIIGICGIGGM 87

Query: 238 GKTTTAKAFYNKYSHIFDISCFVENVNQYLQESNPXXXXXXXXXXXXLRRKNYEVSNVES 59
           GKTT AK  YN +SH F+   F+ENV +                      +N  VSN+  
Sbjct: 88  GKTTIAKVVYNTFSHEFEYMSFLENVREVGNTIGLHHLQNQILCDLLQVERNQNVSNISQ 147

Query: 58  GIRQLQHILNRKKALIILD 2
           G   ++++L  K+  I+LD
Sbjct: 148 GANMIKNVLRCKRVFIVLD 166


>emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
 Frame = -1

Query: 412 ESDTVQAIVEHVTSQASTK-IDLEEYLVGIDAVVEEIYQKLRME-LNDVRVIGICGMGGI 239
           ES  V  IV+ +  + + + +D+++ LVG+D+ V EI ++L ++ LNDVR+IGICG+GG+
Sbjct: 29  ESGHVNEIVKDIFRRLNCRMLDVDDNLVGMDSHVNEIIRRLCVDQLNDVRIIGICGIGGM 88

Query: 238 GKTTTAKAFYNKYSHIFDISCFVENVNQYLQESNPXXXXXXXXXXXXLRRKNYEVSNVES 59
           GKTT AK  YN++SH F+   F+ENV +                      +N  VSNV  
Sbjct: 89  GKTTIAKVVYNRFSHEFEYMSFLENVREVGNTMGSHHLQNQFLCDLLQVERNQNVSNVGQ 148

Query: 58  GIRQLQHILNRKKALIILD 2
           G   ++++L  K+  I+LD
Sbjct: 149 GANTIKNVLRCKRVFIVLD 167


>ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
           gi|355497521|gb|AES78724.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1137

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
 Frame = -1

Query: 415 NESDTVQAIVEHVTSQASTKIDL-EEYLVGIDAVVEEIYQKLRMELNDVRVIGICGMGGI 239
           +E+  V+ IVEH+  +   K+ +  + LVGID+ ++E+Y  L M+LN+VR IGI GMGGI
Sbjct: 172 HEASLVETIVEHIQKKLIPKLKVCTDNLVGIDSRIKEVYSLLAMDLNNVRFIGIWGMGGI 231

Query: 238 GKTTTAKAFYNKYSHIFDISCFVENVNQYLQESNPXXXXXXXXXXXXLRRKNYEVSNVES 59
           GKTT A+  Y    + F +SCF+ N+ + + +++               R N +  NV  
Sbjct: 232 GKTTIARLVYEAIKNEFKVSCFLANIRETVSKTDNLAHIQMELLSHLNIRSN-DFYNVHD 290

Query: 58  GIRQLQHILNRKKALIILD 2
           G + L +  N KK L++LD
Sbjct: 291 GKKILANSFNNKKVLLVLD 309


>ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
 Frame = -1

Query: 412 ESDTVQAIVEHVTSQASTK-IDLEEYLVGIDAVVEEIYQKLRMELNDVRVIGICGMGGIG 236
           ESD ++ I++ +  Q + K +D+   LVGID+ V+E+  +L+ME +DVR++GI G+GGIG
Sbjct: 168 ESDQIKKIIDSIFHQLNCKRLDVGANLVGIDSRVKEMILRLQMESSDVRIVGIYGVGGIG 227

Query: 235 KTTTAKAFYNKYSHIFDISCFVENVNQYLQESNPXXXXXXXXXXXXLRRKNYEVSNVESG 56
           KTT AK  Y+K S  F+   FVEN+ +   +                  ++  ++NV+ G
Sbjct: 228 KTTIAKVIYDKLSCKFECMSFVENIRENSNKQGLTHLQNQLLGDILEEERSQNINNVDVG 287

Query: 55  IRQLQHILNRKKALIILD 2
              ++  L+ K+  IILD
Sbjct: 288 ASMIRTALSSKRVFIILD 305


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