BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003755
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   313   5e-83
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   308   1e-81
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2...   301   2e-79
emb|CBI26625.3| unnamed protein product [Vitis vinifera]              301   2e-79
sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot...   298   1e-78

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  313 bits (801), Expect = 5e-83
 Identities = 151/198 (76%), Positives = 173/198 (87%), Gaps = 1/198 (0%)
 Frame = +1

Query: 271 YSASP-ASASEEIRSLWIGDLQPWMDETYINSCFYNTGELSSVKIIRNKHTGQPEGYGFL 447
           Y A+P AS  EEIRSLWIGDLQPWM+E Y+  CF  TGE+ SVK+IRNK TGQ EGYGF+
Sbjct: 77  YVAAPQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFI 136

Query: 448 EFRSRAAAEQVLQSYNGTPMPNGDQNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVTD 627
           E  +RAAAE++LQ+YNGT MPN +QNFRLNWATLGAGERR DD+PD+TIFVGDLA+DVTD
Sbjct: 137 ELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTD 196

Query: 628 YLLQETFKTRYSSVKGAKVVTDRTTGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSMR 807
           Y+LQETF+  Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG  CSTR MR
Sbjct: 197 YVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMR 256

Query: 808 IGPAATKRPIGGGQQYEK 861
           IGPAATK+P+ GGQQ++K
Sbjct: 257 IGPAATKKPV-GGQQFQK 273



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
 Frame = +1

Query: 310 SLWIGDLQPWMDETYINSCFY-NTGELSSVKIIRNKHTGQPEGYGFLEFRSRAAAEQVLQ 486
           ++++GDL   + +  +   F  +   +   K++ ++ TG+ +GYGF+ F       + + 
Sbjct: 184 TIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMN 243

Query: 487 SYNG--------------TPMPNGDQNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVT 624
             NG              T  P G Q F+        G +   D  + TIFVG L ++VT
Sbjct: 244 EMNGMFCSTRPMRIGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVT 303

Query: 625 DYLLQETFKTRYSSVKGAKVVTDRTTGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSM 804
           D  L++ F ++Y  +   K+         K  GFV+F +     +A++ +NG     +S+
Sbjct: 304 DDYLRQVF-SQYGELVHVKIPV------GKRCGFVQFANRACAEQALAGLNGTQLGAQSI 356

Query: 805 RI 810
           R+
Sbjct: 357 RL 358


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  308 bits (790), Expect = 1e-81
 Identities = 149/199 (74%), Positives = 169/199 (84%), Gaps = 1/199 (0%)
 Frame = +1

Query: 271 YSASP-ASASEEIRSLWIGDLQPWMDETYINSCFYNTGELSSVKIIRNKHTGQPEGYGFL 447
           Y A+P AS  EEIRSLWIGDLQPWM+E Y   CF  TGE+ SVK+IRNK TGQ EGYGF+
Sbjct: 62  YVAAPQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFI 121

Query: 448 EFRSRAAAEQVLQSYNGTPMPNGDQNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVTD 627
           E  +RAAAE++LQ+YNGT MPN +QNFRLNWATLGAGERR DD+PD+TIFVGDLA+DVTD
Sbjct: 122 ELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTD 181

Query: 628 YLLQETFKTRYSSVKGAKVVTDRTTGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSMR 807
           Y+LQETF+  Y SVKGAKVVTDRTTGRSKGYGFVRFGDE EQ+RAM+EMNG  CSTR MR
Sbjct: 182 YVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMR 241

Query: 808 IGPAATKRPIGGGQQYEKG 864
           IGPAATK+P+G   Q  +G
Sbjct: 242 IGPAATKKPVGASFQNTQG 260


>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  301 bits (771), Expect = 2e-79
 Identities = 145/196 (73%), Positives = 163/196 (83%)
 Frame = +1

Query: 274 SASPASASEEIRSLWIGDLQPWMDETYINSCFYNTGELSSVKIIRNKHTGQPEGYGFLEF 453
           +A  A+  +EI+SLWIGDLQ WMDE YI S F  TGE+   K+IRNK TG PEGYGF+EF
Sbjct: 56  AAGSAAVGDEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEF 115

Query: 454 RSRAAAEQVLQSYNGTPMPNGDQNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVTDYL 633
            S AAAE++LQ+YNGTPMPN +Q FRLNWATLGAGERR DD PD+T+F+GDLAADV DYL
Sbjct: 116 VSHAAAERILQTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYL 175

Query: 634 LQETFKTRYSSVKGAKVVTDRTTGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSMRIG 813
           LQETF+  YSSVKGAKVVTDR TGRSKGYGFVRF DENEQMRAM EMNG  CSTR MRIG
Sbjct: 176 LQETFRNVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIG 235

Query: 814 PAATKRPIGGGQQYEK 861
           PAATK+P+   QQY+K
Sbjct: 236 PAATKKPL--TQQYQK 249


>emb|CBI26625.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  301 bits (770), Expect = 2e-79
 Identities = 148/196 (75%), Positives = 171/196 (87%)
 Frame = +1

Query: 340 MDETYINSCFYNTGELSSVKIIRNKHTGQPEGYGFLEFRSRAAAEQVLQSYNGTPMPNGD 519
           M+E Y+  CF  TGE+ SVK+IRNK TGQ EGYGF+E  +RAAAE++LQ+YNGT MPN +
Sbjct: 1   MEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQTYNGTLMPNSE 60

Query: 520 QNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVTDYLLQETFKTRYSSVKGAKVVTDRT 699
           QNFRLNWATLGAGERR DD+PD+TIFVGDLA+DVTDY+LQETF+  Y SVKGAKVVTDRT
Sbjct: 61  QNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRT 120

Query: 700 TGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSMRIGPAATKRPIGGGQQYEKGHREAL 879
           TGRSKGYGFVRFGDE EQ+RAM+EMNG  CSTR MRIGPAATK+P+ GGQQ++KG +EAL
Sbjct: 121 TGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPV-GGQQFQKGLQEAL 179

Query: 880 IFGGLQLISSAEMISL 927
           I GGL+LI SAEMI L
Sbjct: 180 ILGGLELI-SAEMIPL 194


>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
           Short=Poly(A)-binding protein RBP45; AltName:
           Full=RNA-binding protein 45; Short=NplRBP45
           gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
           [Nicotiana plumbaginifolia]
          Length = 409

 Score =  298 bits (763), Expect = 1e-78
 Identities = 143/191 (74%), Positives = 165/191 (86%)
 Frame = +1

Query: 280 SPASASEEIRSLWIGDLQPWMDETYINSCFYNTGELSSVKIIRNKHTGQPEGYGFLEFRS 459
           SP     E+RSLWIGDLQ WMDE Y+++CFY+TGEL S K+IRNK TGQ EGYGFLEFRS
Sbjct: 75  SPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRS 134

Query: 460 RAAAEQVLQSYNGTPMPNGDQNFRLNWATLGAGERRVDDSPDFTIFVGDLAADVTDYLLQ 639
            AAAE +LQ+YNGT MPN +QNFR+NWA+LGAGERR DDS + TIFVGDLAADVTDY+LQ
Sbjct: 135 HAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERR-DDSAEHTIFVGDLAADVTDYILQ 193

Query: 640 ETFKTRYSSVKGAKVVTDRTTGRSKGYGFVRFGDENEQMRAMSEMNGALCSTRSMRIGPA 819
           ETFK+ YSSV+GAKVVTDR TGRSKGYGFV+F DE+EQ+RAM+EMNG LCSTR MRIGPA
Sbjct: 194 ETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPA 253

Query: 820 ATKRPIGGGQQ 852
           A K+P+G  Q+
Sbjct: 254 ANKKPVGTPQK 264