BLASTX nr result

ID: Bupleurum21_contig00003708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003708
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrat...    64   1e-08
ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabid...    64   2e-08
ref|NP_193860.1| oxygen-evolving enhancer protein 3-1 [Arabidops...    64   2e-08
gb|ABK26810.1| unknown [Picea sitchensis]                              64   2e-08
gb|ABK26835.1| unknown [Picea sitchensis] gi|116793677|gb|ABK268...    64   2e-08

>ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297315732|gb|EFH46155.1| PSBQ/PSBQ-1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 224

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -3

Query: 364 LQALTGKLYNVLDGLDYAAKTKSPTKAEKSYAETVSALNDVLSKL 230
           L+ LT KL++ +D LDYAAK KSP++AEK YAETVSALN+VL+KL
Sbjct: 179 LKELTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223


>ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana]
           gi|193806375|sp|Q9XFT3.3|PSBQ1_ARATH RecName:
           Full=Oxygen-evolving enhancer protein 3-1,
           chloroplastic; Short=OEE3; AltName: Full=16 kDa subunit
           of oxygen evolving system of photosystem II; AltName:
           Full=OEC 16 kDa subunit; Flags: Precursor
           gi|332659036|gb|AEE84436.1| oxygen-evolving enhancer
           protein 3-1 [Arabidopsis thaliana]
          Length = 224

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -3

Query: 364 LQALTGKLYNVLDGLDYAAKTKSPTKAEKSYAETVSALNDVLSKL 230
           L+ LT KL++ +D LDYAAK KSP++AEK YAETVSALN+VL+KL
Sbjct: 179 LKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223


>ref|NP_193860.1| oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana]
           gi|2911085|emb|CAA17547.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|3402748|emb|CAA20194.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|7268925|emb|CAB79128.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|15215600|gb|AAK91345.1| AT4g21280/F7J7_220
           [Arabidopsis thaliana] gi|20334896|gb|AAM16204.1|
           AT4g21280/F7J7_220 [Arabidopsis thaliana]
           gi|21593902|gb|AAM65869.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|332659035|gb|AEE84435.1| oxygen-evolving
           enhancer protein 3-1 [Arabidopsis thaliana]
          Length = 223

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -3

Query: 364 LQALTGKLYNVLDGLDYAAKTKSPTKAEKSYAETVSALNDVLSKL 230
           L+ LT KL++ +D LDYAAK KSP++AEK YAETVSALN+VL+KL
Sbjct: 178 LKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 222


>gb|ABK26810.1| unknown [Picea sitchensis]
          Length = 219

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = -3

Query: 364 LQALTGKLYNVLDGLDYAAKTKSPTKAEKSYAETVSALNDVLSKL 230
           L+ LT KL++ LD LDYAA++K   KAEK YAETVSALNDV+SKL
Sbjct: 174 LKTLTSKLFDTLDNLDYAARSKDAPKAEKYYAETVSALNDVISKL 218


>gb|ABK26835.1| unknown [Picea sitchensis] gi|116793677|gb|ABK26839.1| unknown
           [Picea sitchensis] gi|148909289|gb|ABR17744.1| unknown
           [Picea sitchensis] gi|224284923|gb|ACN40191.1| unknown
           [Picea sitchensis] gi|224285419|gb|ACN40432.1| unknown
           [Picea sitchensis] gi|224285725|gb|ACN40578.1| unknown
           [Picea sitchensis]
          Length = 243

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = -3

Query: 364 LQALTGKLYNVLDGLDYAAKTKSPTKAEKSYAETVSALNDVLSKL 230
           L+ LT KL++ LD LDYAA++K   KAEK YAETVSALNDV+SKL
Sbjct: 198 LKTLTSKLFDTLDNLDYAARSKDAPKAEKYYAETVSALNDVISKL 242


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