BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003690
         (1197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   587   e-165
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   585   e-165
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   584   e-164
ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   583   e-164
ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   582   e-164

>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  587 bits (1512), Expect = e-165
 Identities = 287/357 (80%), Positives = 315/357 (88%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1071 ASLNRRQLXXXXXXXXXXTLGSS-AFVLPARSEDQLSEWERVSLPIDPGVVLLDIAFVPD 895
            +S+NRR            +L    A V PA+SE+ LSEWER+ LPIDPGVVLLDIAFVPD
Sbjct: 50   SSINRRHFVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLLDIAFVPD 109

Query: 894  DSSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNCISFHGKEGWIVGKPAIL 715
            D +HGFLLGTRQTI+ETKDGG TWAPRSIPSAE+EDFNYRFN ISF GKEGWIVGKPAIL
Sbjct: 110  DMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAIL 169

Query: 714  LHTSDGGDSWERIPLSAELPGDMVYIKATGDKSAEMVTDEGAIYITSNRGYNWKAAVQET 535
            L+TSD G+SWERIPLSA+LPGDMVYIKATG+KSAEMVTDEGAIY+TSN+GYNWKAAVQET
Sbjct: 170  LYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAIYVTSNKGYNWKAAVQET 229

Query: 534  VSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNFYLTWEPGQPYWQPHNRS 355
            VSATLNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNFYLTWEPGQP+WQPHNR+
Sbjct: 230  VSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRA 289

Query: 354  VARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFYEIPVQSRGFGILDVGYRSEDEA 175
            +ARRIQNMGWRAD             LSKGTGI+EEF E+PVQSRGFGILDVGYRS++EA
Sbjct: 290  IARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQSRGFGILDVGYRSKEEA 349

Query: 174  WAAGGSGVLLKTQNSGKTWTRDRAADNIAANLYSVKFINDKQGFVLGNDGVLLKYLG 4
            WAAGGSGVLLKT N G++WTRD+AADNIAANLYSVKFINDK+GFVLGNDGVLL+YLG
Sbjct: 350  WAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKGFVLGNDGVLLQYLG 406


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  585 bits (1509), Expect = e-165
 Identities = 282/330 (85%), Positives = 303/330 (91%)
 Frame = -1

Query: 993  LPARSEDQLSEWERVSLPIDPGVVLLDIAFVPDDSSHGFLLGTRQTIMETKDGGNTWAPR 814
            L ARSED LSEWERV LPIDPGVVLLDIAFVPDD +HGFLLGTRQTI+ETKDGGNTWAPR
Sbjct: 64   LTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGNTWAPR 123

Query: 813  SIPSAEDEDFNYRFNCISFHGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIK 634
            SIPSAEDEDFNYRFN ISF GKEGWIVGKP+ILL+TSD GDSWERIPLSAELPGDMVYIK
Sbjct: 124  SIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAELPGDMVYIK 183

Query: 633  ATGDKSAEMVTDEGAIYITSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 454
            ATG+KSAEMVTDEGAIY+T+NRGYNW+AAVQETVSATLNRTVSSGISGASYYTGTFNTVN
Sbjct: 184  ATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVN 243

Query: 453  RSPEGNYVAVSSRGNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXL 274
            RSP+G YVAVSSRGNFYLTWEPGQP+WQPHNR+VARRIQNMGWRAD             L
Sbjct: 244  RSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYL 303

Query: 273  SKGTGITEEFYEIPVQSRGFGILDVGYRSEDEAWAAGGSGVLLKTQNSGKTWTRDRAADN 94
            SKG G+TEEF E+PVQSRGFGILDVGYRS DEAWAAGGSG+LL+T N GK+W RD+AADN
Sbjct: 304  SKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADN 363

Query: 93   IAANLYSVKFINDKQGFVLGNDGVLLKYLG 4
            IAANLYSVKFI++K+GFVLGNDGVLL+YLG
Sbjct: 364  IAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  584 bits (1506), Expect = e-164
 Identities = 289/365 (79%), Positives = 317/365 (86%), Gaps = 5/365 (1%)
 Frame = -1

Query: 1083 LVPRASLNRRQLXXXXXXXXXXTLGSSAFVL----PARSEDQL-SEWERVSLPIDPGVVL 919
            +VPRA L +  L           +  +  +L    PA+SE+ L SEWERV LPIDPGVVL
Sbjct: 40   VVPRACLQKPSLTRRHLLAETAAISVAPLILGIEPPAKSEEPLLSEWERVYLPIDPGVVL 99

Query: 918  LDIAFVPDDSSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNCISFHGKEGW 739
            LDIAFVPDD SHGFLLGTRQTIMETKDGGNTW PRSIPSAEDEDFNYRFN ISF GKEGW
Sbjct: 100  LDIAFVPDDLSHGFLLGTRQTIMETKDGGNTWVPRSIPSAEDEDFNYRFNSISFKGKEGW 159

Query: 738  IVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGDKSAEMVTDEGAIYITSNRGYN 559
            IVGKP+ILL+TSD G+SWERIPLSA+LPGD+VYIKATG+KSAEMVTDEGAIY+TSNRGYN
Sbjct: 160  IVGKPSILLYTSDAGESWERIPLSAQLPGDIVYIKATGEKSAEMVTDEGAIYVTSNRGYN 219

Query: 558  WKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNFYLTWEPGQP 379
            W+AAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G+YVAVSSRGNFYLTWEPGQP
Sbjct: 220  WRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGSYVAVSSRGNFYLTWEPGQP 279

Query: 378  YWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFYEIPVQSRGFGILDV 199
            YWQPHNR+VARRIQNMGWRAD             LSKGTGI+E+F EIPVQSRGFGILDV
Sbjct: 280  YWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEDFEEIPVQSRGFGILDV 339

Query: 198  GYRSEDEAWAAGGSGVLLKTQNSGKTWTRDRAADNIAANLYSVKFINDKQGFVLGNDGVL 19
            GYRS++EAWAAGGSGVLL+T N GKTWTRD+AADNIAANLYSVKFI+D +GFVLGNDGVL
Sbjct: 340  GYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDDTKGFVLGNDGVL 399

Query: 18   LKYLG 4
            L++LG
Sbjct: 400  LRFLG 404


>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
            precursor, putative [Ricinus communis]
            gi|223539891|gb|EEF41470.1| Photosystem II
            stability/assembly factor HCF136, chloroplast precursor,
            putative [Ricinus communis]
          Length = 397

 Score =  583 bits (1503), Expect = e-164
 Identities = 290/372 (77%), Positives = 315/372 (84%), Gaps = 1/372 (0%)
 Frame = -1

Query: 1116 NSRNLQSHHRILVPRASLNRRQLXXXXXXXXXXTLGSSAFVL-PARSEDQLSEWERVSLP 940
            N+ +L  HH       SLNRRQ            L S   +  PA +E+ LSEWERV LP
Sbjct: 33   NNVHLPHHH-------SLNRRQFLSQTATVSLPLLSSPLIIQQPANAEETLSEWERVYLP 85

Query: 939  IDPGVVLLDIAFVPDDSSHGFLLGTRQTIMETKDGGNTWAPRSIPSAEDEDFNYRFNCIS 760
             DPGVVLLDIAFVPDD +HGFLLGTRQTI+ETKDGGNTW  RSIPSAEDEDFNYRFN IS
Sbjct: 86   SDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGNTWVSRSIPSAEDEDFNYRFNSIS 145

Query: 759  FHGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGDKSAEMVTDEGAIYI 580
            F GKEGWIVGKPAILL+TSD GDSW+RIPLSA+LPGDMVYIKATG+KSAEMVTD+GAIYI
Sbjct: 146  FKGKEGWIVGKPAILLYTSDAGDSWQRIPLSAQLPGDMVYIKATGEKSAEMVTDQGAIYI 205

Query: 579  TSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNFYL 400
            TSN GYNW+AAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+GNYVAVSSRGNFYL
Sbjct: 206  TSNGGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVSSRGNFYL 265

Query: 399  TWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFYEIPVQSR 220
            TWEPGQP+WQPHNR+VARRIQNMGWRAD             LSKGTGI+E+F EI VQSR
Sbjct: 266  TWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEDFEEISVQSR 325

Query: 219  GFGILDVGYRSEDEAWAAGGSGVLLKTQNSGKTWTRDRAADNIAANLYSVKFINDKQGFV 40
            GFGILDVGYRS+DEAWAAGGSG+LL+T N GKTWTRD+AAD+IAANLYSVKFIND +GFV
Sbjct: 326  GFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTRDKAADSIAANLYSVKFINDSKGFV 385

Query: 39   LGNDGVLLKYLG 4
            LGNDGVLL+YLG
Sbjct: 386  LGNDGVLLRYLG 397


>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  582 bits (1501), Expect = e-164
 Identities = 296/383 (77%), Positives = 320/383 (83%), Gaps = 12/383 (3%)
 Frame = -1

Query: 1116 NSRNLQ----SHHRILVPRAS----LNRRQLXXXXXXXXXXTLGSSAFVLP----ARSED 973
            N+R LQ    SH     PR S    LNRR             L S   + P    A +ED
Sbjct: 12   NTRCLQRPQNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLILNPQQANAAAED 71

Query: 972  QLSEWERVSLPIDPGVVLLDIAFVPDDSSHGFLLGTRQTIMETKDGGNTWAPRSIPSAED 793
             LSEWERV LPIDPGVVLLDIAFVPDD++HGFLLGTRQTIMETKDGGNTW  RSIPSAED
Sbjct: 72   SLSEWERVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWVQRSIPSAED 131

Query: 792  EDFNYRFNCISFHGKEGWIVGKPAILLHTSDGGDSWERIPLSAELPGDMVYIKATGDKSA 613
            EDFNYRFN ISF GKEGWIVGKPAILL+T+D G++WERIPLSA+LPGDMVYIKATG+KSA
Sbjct: 132  EDFNYRFNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVYIKATGEKSA 191

Query: 612  EMVTDEGAIYITSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNY 433
            EMVTDEGAIYITSNRGYNW+AAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSP GNY
Sbjct: 192  EMVTDEGAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPNGNY 251

Query: 432  VAVSSRGNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGIT 253
            VAVSSRGNFYLTWEPGQ +WQPHNR++ARRIQNMGWRAD             LSKGTGI+
Sbjct: 252  VAVSSRGNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLYLSKGTGIS 311

Query: 252  EEFYEIPVQSRGFGILDVGYRSEDEAWAAGGSGVLLKTQNSGKTWTRDRAADNIAANLYS 73
            EEF EIPVQSRGFGILDVGYRS++EAWAAGGSGVLL+T N GKTWTRD+AADNIAANLYS
Sbjct: 312  EEFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYS 371

Query: 72   VKFINDKQGFVLGNDGVLLKYLG 4
            VKFI+DK+GFVLGNDGVLL+YLG
Sbjct: 372  VKFIDDKKGFVLGNDGVLLRYLG 394