BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003687
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   107   3e-21
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   104   2e-20
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A...   104   2e-20

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  117 bits (292), Expect = 3e-24
 Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
 Frame = +1

Query: 10  SLWLAWFRLNVLKGRSLWNIKTPSFASWGVKTILNYRSFARQYLSYQVGPNCMFSLWYDP 189
           S+W  W R N+L+GR+ W IKTP   SW    IL  RS A   + Y +G     SLW+D 
Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247

Query: 190 W-PGEPLVSRFGPEIISTLDSHPAATVSEIMVNNSWAPLHS---NHYLSIELCHALQDIP 357
           W P  PL   +G   I        A V+ ++ N+ W    +     +  IE   +  +  
Sbjct: 248 WHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPK 307

Query: 358 IHQSYCILW--DGSKMANTSSIWQTIRRRGPLACWASALWHPWAIKKFSFTLWLALKNRL 531
           + Q   ++W    +   +    W+ +RR   +  W   +W   A+ + SF LW+A++ +L
Sbjct: 308 MGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKL 367

Query: 532 LTRDRMIRFGMNTNPLCPLCNVDFENIQHFLVQCPYATSI 651
            T+D++ RFG++    C LC  + E+  H   +C Y  +I
Sbjct: 368 TTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 407


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  107 bits (267), Expect = 3e-21
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
 Frame = +1

Query: 31   RLNVLKGRSLWNIKTPSFASWGVKTILNYRSFARQYLSYQVGPNCMFSLWYDPW-PGEPL 207
            R N+L+GR+ W IKTP   SW    IL  RS A   + Y +G     SLW+D W P  PL
Sbjct: 1068 RSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPL 1127

Query: 208  VSRFGPEIISTLDSHPAATVSEIMVNNSWAPLHSNH---YLSIELCHALQDIPIHQSYCI 378
               +G   I        A V+ ++ N+ W    +     +  IE   +  +  + Q   I
Sbjct: 1128 ADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEI 1187

Query: 379  LWDGSKMAN--TSSIWQTIRRRGPLACWASALWHPWAIKKFSFTLWLALKNRLLTRDRMI 552
            +W  S          W+ +RR   +  W   +W   A+ + SF LW+A++ +L T+D++ 
Sbjct: 1188 VWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLY 1247

Query: 553  RFGMNTNPLCPLCNVDFENIQHFLVQCPYATSI 651
            RFG++    C LC  + E+  H   +C Y  +I
Sbjct: 1248 RFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAI 1280


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  107 bits (266), Expect = 3e-21
 Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 16/255 (6%)
 Frame = +1

Query: 10   SLWLAWFRLNVLKGRSLWNIKTPSFASWGVKTILNYRSFARQYLSYQVGPNCMFSLWYDP 189
            SLW+AW   N L+  + WN +  S  SW  K IL  R  A+++L   VG   + S WYD 
Sbjct: 892  SLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDH 951

Query: 190  WPG-EPLVSRFGPEIISTLDSHPAATVSEIMVNNSWA-PLHSNHYLSI-ELCHALQDIPI 360
            W    PL+   G         H +A V+E   +  W  P       S+  L   L + P 
Sbjct: 952  WSNLGPLIEAIGASGPQLTGIHESAVVTEASSSTGWILPSARTRNASLANLRSTLLNSPA 1011

Query: 361  ------HQSYCILWDGSKMANTSS--IWQTIRRRGPLACWASALWHPWAIKKFSFTLWLA 516
                    +Y    +GS   + SS   W+ +R+R     WA+A+W+   I K++F  W+A
Sbjct: 1012 PSGDRGEDTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVA 1071

Query: 517  LKNRLLTRDRMIRFGMNTNPLCPLCNVDFENIQHFLVQCPYATSIMSA-----APTQLSL 681
              NRL  R R   +  N   LC +C  + E   H  + C   + I          +Q+  
Sbjct: 1072 HLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFR 1131

Query: 682  NWADYQEGRFTLQNT 726
             W D  E   + Q +
Sbjct: 1132 EWKDIIEWMLSNQGS 1146


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  104 bits (260), Expect = 2e-20
 Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 16/233 (6%)
 Frame = +1

Query: 10   SLWLAWFRLNVLKGRSLWNIKTPS-FASWGVKTILNYRSFARQYLSYQVGPNCMFSLWYD 186
            SLW+ W R+N+LK  S W+I T S   SW  + +L +R  A+ +   +V      S W+D
Sbjct: 621  SLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFD 680

Query: 187  PWPGE-PLVSRFGPEIISTLDSHPAATVSEIMVNNSWAPLHSNHYLSIELCHALQDIPIH 363
             W  + PL++  G      +      T++E     +W+      +  +E+ +  ++I + 
Sbjct: 681  NWSEKGPLINLTGARGAIDMGISRHMTLAE-----AWSRRRRKRH-RVEILNEFEEILL- 733

Query: 364  QSY---------CILWDGSKMA-----NTSSIWQTIRRRGPLACWASALWHPWAIKKFSF 501
            Q Y          ILW G +       +T   W  IR       W   +W   A  KFSF
Sbjct: 734  QKYQHRNIELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSF 793

Query: 502  TLWLALKNRLLTRDRMIRFGMNTNPLCPLCNVDFENIQHFLVQCPYATSIMSA 660
              WLA++NRL T DRM+ +   T   C  C+   E   H   QC Y++ I ++
Sbjct: 794  CAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTS 846


>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 288

 Score =  104 bits (259), Expect = 2e-20
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 5/221 (2%)
 Frame = +1

Query: 10  SLWLAWFRLNVLKGRSLWNIKTPSFASWGVKTILNYRSFARQYLSYQVGPNCMFSLWYDP 189
           SLW+AW    +LKGRSLW I      SW  + IL  R   + ++  +VG      +W DP
Sbjct: 48  SLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKRDILKAHVKMEVGNGKKCRVWLDP 107

Query: 190 W-PGEPLVSRFGPEIISTLDSHPAATVSEIMVNNS---WAPLHSNHYLSIELCHALQDIP 357
              G P++ +FG  +I   DS   A + + M  +    W+ +  +     +    ++  P
Sbjct: 108 RIQGGPIIQQFGERVIYDADSRRDARLVDFMGRDGDWRWSLVSLDLMDIWDRIQGVRPSP 167

Query: 358 IHQSYCILWDGSKMA-NTSSIWQTIRRRGPLACWASALWHPWAIKKFSFTLWLALKNRLL 534
             +   +   GS  + +  S  + IR       W+  LW    I K SF  WLA+K+RL 
Sbjct: 168 SVEDMWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKDRLG 227

Query: 535 TRDRMIRFGMNTNPLCPLCNVDFENIQHFLVQCPYATSIMS 657
           TRDR+ R+  +    C LC  ++E+  H    CP+   I S
Sbjct: 228 TRDRLSRWDSSIPLSCILCGRNYESRDHLFFPCPFGWEIWS 268