BLASTX nr result
ID: Bupleurum21_contig00003682
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003682
(1823 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera] 267 6e-69
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana] 258 4e-66
ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Ara... 258 4e-66
gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana] 258 4e-66
ref|NP_176725.1| chromatin assembly factor-1 (FASCIATA1) [Arabid... 258 4e-66
>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
Length = 872
Score = 267 bits (683), Expect = 6e-69
Identities = 153/263 (58%), Positives = 197/263 (74%), Gaps = 19/263 (7%)
Frame = +3
Query: 138 MAIDVEENNKPEMNSA---KKCLKRKRASLIESM-TKEDRESQIVALREEMHGLFNYFKE 305
MA VE EM+ + KK LKRKR S + T EDR+++I ALR EM GLF YF+E
Sbjct: 4 MAEVVEVLADAEMSGSDHPKKSLKRKRISPVAGAPTVEDRKARIGALRAEMEGLFRYFEE 63
Query: 306 ILEVNKRVELDLGVGG--NSLIACLLEESRYPLSKLVDEIYEKVK--DIGSDVTLASVRS 473
++ ++V+L++G G N+++A LLEESR PLSKLV EIYEKVK D G VTLA+V+S
Sbjct: 64 VM--GEKVDLEVGQCGSMNAVVAVLLEESRLPLSKLVSEIYEKVKVRDNGGGVTLATVKS 121
Query: 474 SVLLIGQRSFYGLPNVNADVLEDDSESCLWCWETRDMKLIPKSMRGGLKIWRTCRKKINE 653
S +L+GQR YG+PN +ADVLED++ SCLWCWETRD+KL+PKS+RG LKI RTCRKK++E
Sbjct: 122 SAVLVGQRLAYGVPNADADVLEDETASCLWCWETRDIKLMPKSVRGLLKIRRTCRKKVHE 181
Query: 654 RITAV-----------SAMIAALEKADNDQTHNQELIKASDRLGKVLSESDIRLLIESML 800
RI+AV SAMI ALEK ++DQ + +LIKAS++L KVL+E+DIRLLIESM+
Sbjct: 182 RISAVSAASYQHLHLISAMINALEKPESDQNYKYDLIKASEKLAKVLNEADIRLLIESMV 241
Query: 801 QKNGADMVEKGGKREQNMLIKQM 869
QK+GADM EK KRE+ +LIKQ+
Sbjct: 242 QKDGADMAEKDVKREEKILIKQL 264
Score = 171 bits (432), Expect = 8e-40
Identities = 99/236 (41%), Positives = 133/236 (56%), Gaps = 3/236 (1%)
Frame = +3
Query: 1125 TLMERFLKKSKQFTPSQKEPSPATIISTDLPCKRDTQVLESVTLFMDSMLSQLDETETEH 1304
++MERF+K++K + S + S ++D + ++ ESVTL MD +LS D ++E
Sbjct: 350 SIMERFVKRNKNNSTSLNDQSSTKATTSDSSTNKSEKMPESVTLSMDFVLSSKDGIDSEE 409
Query: 1305 LWKLHLNSWRCLGHSIRTDRKQQWGIRRTPKTELIKELKLTSTEHC--DEELNTEKLSDA 1478
+ K HL SWR +S R++RKQ WGIRR PKTEL+KE+KLT D EL+ EK+ D
Sbjct: 410 IRKSHLASWR---YSDRSNRKQHWGIRRKPKTELVKEIKLTGNRGLARDNELSIEKIVDG 466
Query: 1479 WGEMNSNRREC-TNIDYPHSKGXXXXXXXXXXXFDKSHRPAFYGTWPRESQVIKPRHPFV 1655
W E + R TN S FDKSHRPAFYG WP++SQ++ PR PF
Sbjct: 467 WEETTAEDRLFDTNAYSCPSDAQEVQSNKQLLQFDKSHRPAFYGIWPKKSQIVGPRCPFK 526
Query: 1656 KDSELXXXXXXXXXXXXXXXXXXXXXCDKDDEDESLEDGPSKAEEEDESEDGFFVP 1823
KD +L CDKDDE+ES+E+G K ++DESED F VP
Sbjct: 527 KDXDLDYDIDSDEEWEEEDPGESLSDCDKDDEEESVEEGCLKG-DDDESEDDFMVP 581
>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
Length = 406
Score = 258 bits (659), Expect = 4e-66
Identities = 130/244 (53%), Positives = 184/244 (75%), Gaps = 5/244 (2%)
Frame = +3
Query: 153 EENNKPEMNSAKKCLKRKRA-SLIESMTKEDRESQIVALREEMHGLFNYFKEILEVNKRV 329
E N+ M KK KRKR + IE++T E++ESQI +L EM GLF+YF+E+++ +KR
Sbjct: 9 ENENRKTMIEPKKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRT 68
Query: 330 ELDLGVGG----NSLIACLLEESRYPLSKLVDEIYEKVKDIGSDVTLASVRSSVLLIGQR 497
+L G NS++A L+EE PLSKLVDEIY K+K+ VT+ +V+S+V+ +GQR
Sbjct: 69 DLFSGFSECSSLNSMVALLMEEMSLPLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQR 128
Query: 498 SFYGLPNVNADVLEDDSESCLWCWETRDMKLIPKSMRGGLKIWRTCRKKINERITAVSAM 677
YG+ NV+ADVLEDDSESCLWCWETRD+K++P S+RG LK+ RTCRKKI+ERITAVSAM
Sbjct: 129 VSYGVLNVDADVLEDDSESCLWCWETRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAM 188
Query: 678 IAALEKADNDQTHNQELIKASDRLGKVLSESDIRLLIESMLQKNGADMVEKGGKREQNML 857
+AAL++ + ++ +L KA+++LGK+LSE DIR +++M+QKN ++M EK KRE+ +L
Sbjct: 189 LAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLL 248
Query: 858 IKQM 869
+KQ+
Sbjct: 249 LKQL 252
>ref|NP_001185320.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
gi|332196259|gb|AEE34380.1| chromatin assembly factor-1
(FASCIATA1) [Arabidopsis thaliana]
Length = 807
Score = 258 bits (659), Expect = 4e-66
Identities = 130/244 (53%), Positives = 184/244 (75%), Gaps = 5/244 (2%)
Frame = +3
Query: 153 EENNKPEMNSAKKCLKRKRA-SLIESMTKEDRESQIVALREEMHGLFNYFKEILEVNKRV 329
E N+ M KK KRKR + IE++T E++ESQI +L EM GLF+YF+E+++ +KR
Sbjct: 9 ENENRKTMIEPKKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRT 68
Query: 330 ELDLGVGG----NSLIACLLEESRYPLSKLVDEIYEKVKDIGSDVTLASVRSSVLLIGQR 497
+L G NS++A L+EE PLSKLVDEIY K+K+ VT+ +V+S+V+ +GQR
Sbjct: 69 DLFSGFSECSSLNSMVALLMEEMSLPLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQR 128
Query: 498 SFYGLPNVNADVLEDDSESCLWCWETRDMKLIPKSMRGGLKIWRTCRKKINERITAVSAM 677
YG+ NV+ADVLEDDSESCLWCWETRD+K++P S+RG LK+ RTCRKKI+ERITAVSAM
Sbjct: 129 VSYGVLNVDADVLEDDSESCLWCWETRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAM 188
Query: 678 IAALEKADNDQTHNQELIKASDRLGKVLSESDIRLLIESMLQKNGADMVEKGGKREQNML 857
+AAL++ + ++ +L KA+++LGK+LSE DIR +++M+QKN ++M EK KRE+ +L
Sbjct: 189 LAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLL 248
Query: 858 IKQM 869
+KQ+
Sbjct: 249 LKQL 252
Score = 149 bits (375), Expect = 3e-33
Identities = 89/235 (37%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Frame = +3
Query: 1125 TLMERFLKKSKQFTPSQKEPSPATIISTDLPCKRDTQVLESVTLFMDSMLSQLDETETEH 1304
++MERFLKKSK + +Q + + + + +L C + + V +D+ S E +
Sbjct: 329 SIMERFLKKSKDSSLTQPKLPSSEVTAQELSCTKHENEIGKVVQAIDNAFSTTCEATVDD 388
Query: 1305 LWKLHLNSWRCLGHSIRTDRKQQWGIRRTPKTELIKELKLTSTEHC--DEELNTEKLSDA 1478
+ + H SWR LGH + + +K WG+RR PK+EL +LKL++ D E N EK D
Sbjct: 389 IRREHFASWRQLGHLLSSSKKH-WGMRRQPKSELFPKLKLSTNSGVTSDGEPNMEKQGDG 447
Query: 1479 WGEMNSNRRECTNIDYPHSKGXXXXXXXXXXXFDKSHRPAFYGTWPRESQVIKPRHPFVK 1658
E N + R+C K FDKS RP FYG WP +SQV+KPR P K
Sbjct: 448 CEENNFDGRQCKPSSSNRKKSRRVKQLLQ---FDKSCRPGFYGIWPSQSQVVKPRRPLQK 504
Query: 1659 DSELXXXXXXXXXXXXXXXXXXXXXCDKDDEDESLEDGPSKAEEEDESEDGFFVP 1823
D EL C+K DEDESLE+G SKA++ED+SED F VP
Sbjct: 505 DPELDYEVDSDEEWEEEEAGESLSDCEK-DEDESLEEGCSKADDEDDSEDDFMVP 558
>gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]
Length = 763
Score = 258 bits (659), Expect = 4e-66
Identities = 130/244 (53%), Positives = 184/244 (75%), Gaps = 5/244 (2%)
Frame = +3
Query: 153 EENNKPEMNSAKKCLKRKRA-SLIESMTKEDRESQIVALREEMHGLFNYFKEILEVNKRV 329
E N+ M KK KRKR + IE++T E++ESQI +L EM GLF+YF+E+++ +KR
Sbjct: 9 ENENRKTMIEPKKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRT 68
Query: 330 ELDLGVGG----NSLIACLLEESRYPLSKLVDEIYEKVKDIGSDVTLASVRSSVLLIGQR 497
+L G NS++A L+EE PLSKLVDEIY K+K+ VT+ +V+S+V+ +GQR
Sbjct: 69 DLFSGFSECSSLNSMVALLMEEMSLPLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQR 128
Query: 498 SFYGLPNVNADVLEDDSESCLWCWETRDMKLIPKSMRGGLKIWRTCRKKINERITAVSAM 677
YG+ NV+ADVLEDDSESCLWCWETRD+K++P S+RG LK+ RTCRKKI+ERITAVSAM
Sbjct: 129 VSYGVLNVDADVLEDDSESCLWCWETRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAM 188
Query: 678 IAALEKADNDQTHNQELIKASDRLGKVLSESDIRLLIESMLQKNGADMVEKGGKREQNML 857
+AAL++ + ++ +L KA+++LGK+LSE DIR +++M+QKN ++M EK KRE+ +L
Sbjct: 189 LAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLL 248
Query: 858 IKQM 869
+KQ+
Sbjct: 249 LKQL 252
Score = 149 bits (375), Expect = 3e-33
Identities = 89/235 (37%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Frame = +3
Query: 1125 TLMERFLKKSKQFTPSQKEPSPATIISTDLPCKRDTQVLESVTLFMDSMLSQLDETETEH 1304
++MERFLKKSK + +Q + + + + +L C + + V +D+ S E +
Sbjct: 337 SIMERFLKKSKDSSLTQPKLPSSEVTAQELSCTKHENEIGKVVQAIDNAFSTTCEATVDD 396
Query: 1305 LWKLHLNSWRCLGHSIRTDRKQQWGIRRTPKTELIKELKLTSTEHC--DEELNTEKLSDA 1478
+ + H SWR LGH + + +K WG+RR PK+EL +LKL++ D E N EK D
Sbjct: 397 IRREHFASWRQLGHLLSSSKKH-WGMRRQPKSELFPKLKLSTNSGVTSDGEPNMEKQGDG 455
Query: 1479 WGEMNSNRRECTNIDYPHSKGXXXXXXXXXXXFDKSHRPAFYGTWPRESQVIKPRHPFVK 1658
E N + R+C K FDKS RP FYG WP +SQV+KPR P K
Sbjct: 456 CEENNFDGRQCKPSSSNRKKSRRAKQLLQ---FDKSCRPGFYGIWPSQSQVVKPRRPLQK 512
Query: 1659 DSELXXXXXXXXXXXXXXXXXXXXXCDKDDEDESLEDGPSKAEEEDESEDGFFVP 1823
D EL C+K DEDESLE+G SKA++ED+SED F VP
Sbjct: 513 DPELDYEVDSDEEWEEEEAGESLSDCEK-DEDESLEEGCSKADDEDDSEDDFMVP 566
>ref|NP_176725.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
gi|75213311|sp|Q9SXY0.1|FAS1_ARATH RecName:
Full=Chromatin assembly factor 1 subunit FAS1;
Short=CAF-1 subunit FAS1; AltName: Full=CAF-1 p150
homolog; AltName: Full=Protein FASCIATA 1
gi|4887626|dbj|BAA77811.1| FAS1 [Arabidopsis thaliana]
gi|22022526|gb|AAM83221.1| At1g65470/F5I14_33
[Arabidopsis thaliana] gi|332196258|gb|AEE34379.1|
chromatin assembly factor-1 (FASCIATA1) [Arabidopsis
thaliana]
Length = 815
Score = 258 bits (659), Expect = 4e-66
Identities = 130/244 (53%), Positives = 184/244 (75%), Gaps = 5/244 (2%)
Frame = +3
Query: 153 EENNKPEMNSAKKCLKRKRA-SLIESMTKEDRESQIVALREEMHGLFNYFKEILEVNKRV 329
E N+ M KK KRKR + IE++T E++ESQI +L EM GLF+YF+E+++ +KR
Sbjct: 9 ENENRKTMIEPKKLNKRKREPTAIENLTSEEKESQISSLNLEMKGLFDYFREVMDKSKRT 68
Query: 330 ELDLGVGG----NSLIACLLEESRYPLSKLVDEIYEKVKDIGSDVTLASVRSSVLLIGQR 497
+L G NS++A L+EE PLSKLVDEIY K+K+ VT+ +V+S+V+ +GQR
Sbjct: 69 DLFSGFSECSSLNSMVALLMEEMSLPLSKLVDEIYLKLKEKTESVTMVAVKSAVVSVGQR 128
Query: 498 SFYGLPNVNADVLEDDSESCLWCWETRDMKLIPKSMRGGLKIWRTCRKKINERITAVSAM 677
YG+ NV+ADVLEDDSESCLWCWETRD+K++P S+RG LK+ RTCRKKI+ERITAVSAM
Sbjct: 129 VSYGVLNVDADVLEDDSESCLWCWETRDLKIMPSSVRGVLKLRRTCRKKIHERITAVSAM 188
Query: 678 IAALEKADNDQTHNQELIKASDRLGKVLSESDIRLLIESMLQKNGADMVEKGGKREQNML 857
+AAL++ + ++ +L KA+++LGK+LSE DIR +++M+QKN ++M EK KRE+ +L
Sbjct: 189 LAALQREETEKLWRSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLL 248
Query: 858 IKQM 869
+KQ+
Sbjct: 249 LKQL 252
Score = 149 bits (375), Expect = 3e-33
Identities = 89/235 (37%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Frame = +3
Query: 1125 TLMERFLKKSKQFTPSQKEPSPATIISTDLPCKRDTQVLESVTLFMDSMLSQLDETETEH 1304
++MERFLKKSK + +Q + + + + +L C + + V +D+ S E +
Sbjct: 337 SIMERFLKKSKDSSLTQPKLPSSEVTAQELSCTKHENEIGKVVQAIDNAFSTTCEATVDD 396
Query: 1305 LWKLHLNSWRCLGHSIRTDRKQQWGIRRTPKTELIKELKLTSTEHC--DEELNTEKLSDA 1478
+ + H SWR LGH + + +K WG+RR PK+EL +LKL++ D E N EK D
Sbjct: 397 IRREHFASWRQLGHLLSSSKKH-WGMRRQPKSELFPKLKLSTNSGVTSDGEPNMEKQGDG 455
Query: 1479 WGEMNSNRRECTNIDYPHSKGXXXXXXXXXXXFDKSHRPAFYGTWPRESQVIKPRHPFVK 1658
E N + R+C K FDKS RP FYG WP +SQV+KPR P K
Sbjct: 456 CEENNFDGRQCKPSSSNRKKSRRVKQLLQ---FDKSCRPGFYGIWPSQSQVVKPRRPLQK 512
Query: 1659 DSELXXXXXXXXXXXXXXXXXXXXXCDKDDEDESLEDGPSKAEEEDESEDGFFVP 1823
D EL C+K DEDESLE+G SKA++ED+SED F VP
Sbjct: 513 DPELDYEVDSDEEWEEEEAGESLSDCEK-DEDESLEEGCSKADDEDDSEDDFMVP 566