BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003672
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    64   8e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    59   1e-10
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    55   2e-09
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    57   1e-08
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               53   1e-08

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 63.9 bits (154), Expect(2) = 8e-11
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
 Frame = -3

Query: 656 DCILWDGNK-----MANTSSIWQTIRRRDPLACWASALWHPWAIKKCSFTL*LALKNRLL 492
           D  LW G +     + +T   W  IR       W   +W   AI K +F + LA+ NRL 
Sbjct: 272 DRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLS 331

Query: 491 TRDCMIRFGMNTNPLCPICNVDLENIQHLLVQCPYATFIMSAAPTQLSLNWADYQEGRFT 312
           T D M  + M  +  C +CN  LE+  HL   CP+AT I       +  N   Y + +  
Sbjct: 332 TGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPLAKTI-YNTCFYTDWQTI 390

Query: 311 LQNTNEN 291
           + N + N
Sbjct: 391 INNVSRN 397



 Score = 28.9 bits (63), Expect(2) = 8e-11
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 295 KICAGLTHLFLAISVFYLWKERNSRIH--STDHSKRL 191
           +I   L    L ++++ LW+ERN R H  S + S RL
Sbjct: 401 RIAGFLARCILQVTIYTLWRERNERKHGASPNSSSRL 437


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 59.3 bits (142), Expect(2) = 1e-10
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
 Frame = -3

Query: 668  IHQSDCILWDGNKMA-----NTSSIWQTIRRRDPLACWASALWHPWAIKKCSFTL*LALK 504
            I   D ILW G +       +T   W  IR       W   +W   A  K SF   LA++
Sbjct: 741  IELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIR 800

Query: 503  NRLLTRDCMIRFGMNTNPLCPICNVDLENIQHLLVQCPYATFIMSA 366
            NRL T D M+ +   T   C  C+  +E   HL  QC Y++ I ++
Sbjct: 801  NRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTS 846



 Score = 32.7 bits (73), Expect(2) = 1e-10
 Identities = 20/68 (29%), Positives = 38/68 (55%)
 Frame = -1

Query: 295  KICAGLTHLFLAISVFYLWKERNSRIHSTDHSKRLDAVDLLQEIKGTLRYKVFSIQSFKN 116
            +I + L+     +S+  +W+ERNSR H     K   A +L+++I  T+R ++ +I+  K 
Sbjct: 874  RIQSFLSRYTFQVSIHSIWRERNSRRHG---EKSRSASNLIRQIDKTIRNQLSTIKK-KG 929

Query: 115  AANLDRNL 92
               L++ L
Sbjct: 930  DLRLEKGL 937


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
 Frame = -3

Query: 656  DCILW--DGNKMANTSS--IWQTIRRRDPLACWASALWHPWAIKKCSFTL*LALKNRLLT 489
            D   W  +G+   + SS   W+ +R+RD    WA+A+W+   I K +F   +A  NRL  
Sbjct: 1019 DTYTWYIEGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPV 1078

Query: 488  RDCMIRFGMNTNPLCPICNVDLENIQHLLVQCPYATFIMSA-----APTQLSLNWADYQE 324
            R     +  N   LC +C  + E   HL + C   + I          +Q+   W D  E
Sbjct: 1079 RARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIE 1138

Query: 323  GRFTLQNT 300
               + Q +
Sbjct: 1139 WMLSNQGS 1146



 Score = 32.3 bits (72), Expect(2) = 2e-09
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 280  LTHLFLAISVFYLWKERNSRIHS 212
            L  L +  ++F++WKERNSR+HS
Sbjct: 1151 LKKLAVQTAIFHIWKERNSRLHS 1173


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 57.4 bits (137), Expect(2) = 1e-08
 Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
 Frame = -3

Query: 668 IHQSDCILWDGN-----KMANTSSIWQTIRRRDPLACWASALWHPWAIKKCSFTL*LALK 504
           +   D +LW G         +T   W   R + P   W   +W   A  K SF   LA K
Sbjct: 238 VETEDVVLWKGKGGRFKPSFSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATK 297

Query: 503 NRLLTRDCMIRFGMNTNPLCPICNVDLENIQHLLVQCPYATFIMSAAPTQL 351
           NRL T D M+ +    N  C  C    E   HL   C Y+  + S   ++L
Sbjct: 298 NRLSTGDRMMSWNAGVNLSCVFCQEQTETRNHLFFTCRYSREVWSGLTSKL 348



 Score = 28.1 bits (61), Expect(2) = 1e-08
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -1

Query: 259 ISVFYLWKERNSRIHSTDHSKRLDAVDLLQEIKGTLRYKVFSIQ 128
           I V+ +WKERNSR H     + L +  LL+ +   +R K+ +I+
Sbjct: 383 ILVYSIWKERNSRRHG---EEPLPSALLLKRLDKEVRNKLSTIR 423


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 53.1 bits (126), Expect(2) = 1e-08
 Identities = 28/94 (29%), Positives = 47/94 (50%)
 Frame = -3

Query: 623  NTSSIWQTIRRRDPLACWASALWHPWAIKKCSFTL*LALKNRLLTRDCMIRFGMNTNPLC 444
            +T+  W  ++       W  A+W    + K +F   +   NRL TRD + R+G +  P C
Sbjct: 969  STADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTC 1028

Query: 443  PICNVDLENIQHLLVQCPYATFIMSAAPTQLSLN 342
             +CN   E+ +HL  +C +++ I S     L+LN
Sbjct: 1029 VLCNDLDESREHLFFRCQFSSEIWSFFMRALNLN 1062



 Score = 32.0 bits (71), Expect(2) = 1e-08
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -1

Query: 280  LTHLFLAISVFYLWKERNSRIHS 212
            +T L    SV+++W+ERN RIHS
Sbjct: 1086 ITKLLFHASVYFIWRERNLRIHS 1108