BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003671
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    74   1e-11
ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844...    72   5e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              70   2e-10
ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcript...    68   7e-10

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
 Frame = -1

Query: 371 DCILWDGNK-----MANTSSIWQTIRRRGPLVCWASALWHPWAIKKCSFTLWLALKNRLL 207
           D  LW G +     + +T   W  IR     V W   +W   AI K +F +WLA+ NRL 
Sbjct: 272 DRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLS 331

Query: 206 TRDRMIRFGMNTNPLCPLCNVDLENIQHILVQCPYATSI 90
           T DRM  + M  +  C LCN  LE+  H+   CP+AT I
Sbjct: 332 TGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEI 370


>ref|XP_003566528.1| PREDICTED: uncharacterized protein LOC100844973 [Brachypodium
           distachyon]
          Length = 448

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
 Frame = -1

Query: 404 QALQDIPIHQYDCILWD--GNKMANTSSIWQTIRRRGPLVC-WASALWHPWAIKKCSFTL 234
           + L D P    D I+W    N + +TSS ++ ++  G   C +   +W PWA+ KC F  
Sbjct: 250 ELLPDTP----DSIVWTLTPNGIYSTSSAYK-VQFFGATACNFHRLIWSPWALPKCRFFA 304

Query: 233 WLALKNRLLTRDRMIRFGMNTNPLCPLCNVDLENIQHILVQCPYATSIMS 84
           WLA++NRL T DR+   G    PLC LC V  E   H+L  C Y+  I S
Sbjct: 305 WLAIQNRLWTNDRLAARGWPHQPLCKLCGVCPETAAHLLFDCRYSKRIWS 354


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
 Frame = -1

Query: 452  SWAPLQSNHHLSIELCQALQDIPIHQY--------DCILWDGNKMA-----NTSSIWQTI 312
            +W+  +   H  +E+    ++I + +Y        D ILW G +       +T   W  I
Sbjct: 711  AWSRRRRKRH-RVEILNEFEEILLQKYQHRNIELEDAILWRGKEDVFKARFSTKDTWNHI 769

Query: 311  RRRGPLVCWASALWHPWAIKKCSFTLWLALKNRLLTRDRMIRFGMNTNPLCPLCNVDLEN 132
            R       W   +W   A  K SF  WLA++NRL T DRM+ +   T   C  C+  +E 
Sbjct: 770  RTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMET 829

Query: 131  IQHILVQCPYATSIMSA 81
              H+  QC Y++ I ++
Sbjct: 830  RDHLFFQCCYSSEIWTS 846


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
 Frame = -1

Query: 371 DCILWDGNK-----MANTSSIWQTIRRRGPLVCWASALWHPWAIKKCSFTLWLALKNRLL 207
           D +LW G         +T   W   R     V W   +W   A  K SF  WLA++NRL 
Sbjct: 453 DSVLWRGRNDEYMPKFSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLS 512

Query: 206 TRDRMIRFGMNTNPLCPLCNVDLENIQHILVQCPYATSI-----MSAAPTQLSLNWA 51
           T D+M+++    +P C LCN ++E   H+   C Y   I      +    + S NW+
Sbjct: 513 TGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWS 569


>ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332193496|gb|AEE31617.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 210

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
 Frame = -1

Query: 374 YDCILWDGNKMAN---TSSIWQTIRRRGPLVCWASALWHPWAIKKCSFTLWLALKNRLLT 204
           YD ++ D  K+ N   ++  W  +R R  +V WA  +W   A  K +F +W+   +RL T
Sbjct: 18  YDWVVED--KLCNGFSSAKTWAALRPRSDVVSWAKTVWFKGATPKHAFHMWVTNLDRLPT 75

Query: 203 RDRMIRFGMNTNPLCPLCNVDLENIQHILVQCPYATSIMSAAPTQLSLN------WADYQ 42
           + R+  +GM     C LC++D+E+  H+ + C +A  +      +L L       W D  
Sbjct: 76  KTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLWHTVSVRLELPAFSFVVWNDLM 135

Query: 41  EGRFTLQNNNEN 6
           +  +TLQ N  +
Sbjct: 136 D--WTLQRNRRS 145