BLASTX nr result

ID: Bupleurum21_contig00003622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003622
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE72069.1| Cyclin B1-1 [Daucus carota]                           332   4e-89
dbj|BAC15746.1| B1 type cyclin [Daucus carota]                        332   4e-89
ref|XP_002314016.1| cyclin [Populus trichocarpa] gi|222850424|gb...   281   1e-73
ref|XP_002298451.1| predicted protein [Populus trichocarpa] gi|2...   275   7e-72
dbj|BAE80322.1| cyclin B [Camellia sinensis]                          272   4e-71

>dbj|BAE72069.1| Cyclin B1-1 [Daucus carota]
          Length = 433

 Score =  332 bits (852), Expect = 4e-89
 Identities = 164/182 (90%), Positives = 174/182 (95%)
 Frame = +3

Query: 3   RRELQLVGVSSMLIACKYEEIWAPEVNDFIAISDNAYSTEQVLLTEKSIVAKLEWHLTVP 182
           RRELQLVGV SMLIACKYEEIWAPEVNDFIAISDNAY+ EQVLL EKSI+AKLEW+LTVP
Sbjct: 252 RRELQLVGVGSMLIACKYEEIWAPEVNDFIAISDNAYNREQVLLMEKSILAKLEWYLTVP 311

Query: 183 TPYVFLVRYIKSSVPSDTEMENLVFFLAELGLTHYSTVVSYCPSVIAASAVYAARCTLKK 362
           TPYVFLVRYIKSSVPSD EMEN+ FFLAELGLTHY+TV++YCPSVIAASAVYAARCTLKK
Sbjct: 312 TPYVFLVRYIKSSVPSDPEMENMTFFLAELGLTHYTTVMTYCPSVIAASAVYAARCTLKK 371

Query: 363 FPTWTETLKHYTGYSEDQLRDCAKLLVSYHAAVSESKLKAVYKKFSRPEKGVVALVPPGK 542
            P WTETLKHYTGYSEDQLRDCAKLLVSYHAA+SESKLKAVYKKF+RPEKGVVALVPP K
Sbjct: 372 SPFWTETLKHYTGYSEDQLRDCAKLLVSYHAALSESKLKAVYKKFARPEKGVVALVPPLK 431

Query: 543 II 548
           +I
Sbjct: 432 LI 433


>dbj|BAC15746.1| B1 type cyclin [Daucus carota]
          Length = 432

 Score =  332 bits (852), Expect = 4e-89
 Identities = 164/182 (90%), Positives = 174/182 (95%)
 Frame = +3

Query: 3   RRELQLVGVSSMLIACKYEEIWAPEVNDFIAISDNAYSTEQVLLTEKSIVAKLEWHLTVP 182
           RRELQLVGV SMLIACKYEEIWAPEVNDFIAISDNAY+ EQVLL EKSI+AKLEW+LTVP
Sbjct: 251 RRELQLVGVGSMLIACKYEEIWAPEVNDFIAISDNAYNREQVLLMEKSILAKLEWYLTVP 310

Query: 183 TPYVFLVRYIKSSVPSDTEMENLVFFLAELGLTHYSTVVSYCPSVIAASAVYAARCTLKK 362
           TPYVFLVRYIKSSVPSD EMEN+ FFLAELGLTHY+TV++YCPSVIAASAVYAARCTLKK
Sbjct: 311 TPYVFLVRYIKSSVPSDPEMENMTFFLAELGLTHYTTVMTYCPSVIAASAVYAARCTLKK 370

Query: 363 FPTWTETLKHYTGYSEDQLRDCAKLLVSYHAAVSESKLKAVYKKFSRPEKGVVALVPPGK 542
            P WTETLKHYTGYSEDQLRDCAKLLVSYHAA+SESKLKAVYKKF+RPEKGVVALVPP K
Sbjct: 371 SPFWTETLKHYTGYSEDQLRDCAKLLVSYHAALSESKLKAVYKKFARPEKGVVALVPPLK 430

Query: 543 II 548
           +I
Sbjct: 431 LI 432


>ref|XP_002314016.1| cyclin [Populus trichocarpa] gi|222850424|gb|EEE87971.1| cyclin
           [Populus trichocarpa]
          Length = 402

 Score =  281 bits (718), Expect = 1e-73
 Identities = 137/180 (76%), Positives = 152/180 (84%)
 Frame = +3

Query: 3   RRELQLVGVSSMLIACKYEEIWAPEVNDFIAISDNAYSTEQVLLTEKSIVAKLEWHLTVP 182
           RRELQLVG+SSMLIACKYEEIWAPEVNDF+ ISDNAY  EQVL  EK I+ KLEW+LTVP
Sbjct: 216 RRELQLVGISSMLIACKYEEIWAPEVNDFVRISDNAYIREQVLAMEKEILGKLEWYLTVP 275

Query: 183 TPYVFLVRYIKSSVPSDTEMENLVFFLAELGLTHYSTVVSYCPSVIAASAVYAARCTLKK 362
           TPYVFLVRYIK+S+PSD E ENLVFFL+ELGL  Y  VV Y PS IAASAVYAARCTL K
Sbjct: 276 TPYVFLVRYIKASIPSDEETENLVFFLSELGLMQYPVVVKYGPSKIAASAVYAARCTLDK 335

Query: 363 FPTWTETLKHYTGYSEDQLRDCAKLLVSYHAAVSESKLKAVYKKFSRPEKGVVALVPPGK 542
            P WTETLKH+TGY+ED LRDCAKLLV +H A +ESKLKAVYKKFS  ++G VAL+ P +
Sbjct: 336 IPFWTETLKHHTGYTEDMLRDCAKLLVHFHTAAAESKLKAVYKKFSSADRGAVALLTPAR 395


>ref|XP_002298451.1| predicted protein [Populus trichocarpa] gi|222845709|gb|EEE83256.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  275 bits (703), Expect = 7e-72
 Identities = 133/180 (73%), Positives = 153/180 (85%)
 Frame = +3

Query: 3   RRELQLVGVSSMLIACKYEEIWAPEVNDFIAISDNAYSTEQVLLTEKSIVAKLEWHLTVP 182
           RRELQLVG+SSML+ACKYEEIWAPEVNDF+ ISDNAY+ EQVL  EK+I+ KLEW+LTVP
Sbjct: 122 RRELQLVGISSMLLACKYEEIWAPEVNDFVCISDNAYTREQVLAMEKAILGKLEWYLTVP 181

Query: 183 TPYVFLVRYIKSSVPSDTEMENLVFFLAELGLTHYSTVVSYCPSVIAASAVYAARCTLKK 362
           TPYVFLVRYIK+S+PSD E E+LVFFL+ELGL  Y  VV Y PS IAASAVYAARCT+ K
Sbjct: 182 TPYVFLVRYIKASIPSDKETESLVFFLSELGLMQYHVVVKYGPSKIAASAVYAARCTMDK 241

Query: 363 FPTWTETLKHYTGYSEDQLRDCAKLLVSYHAAVSESKLKAVYKKFSRPEKGVVALVPPGK 542
            P WTETLKH+TGY+ED LRDCAKLLV  H+A ++SKLKAVYKKFS  + G VAL+ P +
Sbjct: 242 SPLWTETLKHHTGYTEDMLRDCAKLLVQCHSAAAQSKLKAVYKKFSSEDYGAVALLTPAR 301


>dbj|BAE80322.1| cyclin B [Camellia sinensis]
          Length = 440

 Score =  272 bits (696), Expect = 4e-71
 Identities = 134/186 (72%), Positives = 156/186 (83%), Gaps = 6/186 (3%)
 Frame = +3

Query: 3   RRELQLVGVSSMLIACKYEEIWAPEVNDFIAISDNAYSTEQVLLTEKSIVAKLEWHLTVP 182
           RRELQLVG+SSMLIACKYEEIWAPEV+DFI ISDNAY  EQ+L+ EK+I+ KLEW+LTVP
Sbjct: 249 RRELQLVGISSMLIACKYEEIWAPEVSDFIVISDNAYVREQILIMEKAILGKLEWYLTVP 308

Query: 183 TPYVFLVRYIKSSVPSD---TEMENLVFFLAELGLTHYSTVVSYCPSVIAASAVYAARCT 353
           TPYVFLVR+IK+SVPS+    EMEN+VFFLAELGL HY T++ YCPS+IAASAVYAARCT
Sbjct: 309 TPYVFLVRFIKASVPSNDHREEMENMVFFLAELGLMHYPTIILYCPSMIAASAVYAARCT 368

Query: 354 LKKFPTWTETLKHYTGYSEDQLRDCAKLLVSYHA---AVSESKLKAVYKKFSRPEKGVVA 524
           L   P WTETLKH+TGYSEDQL DCAK+L  +H+    V +SKLKAVYKKFS  ++  VA
Sbjct: 369 LNSNPLWTETLKHHTGYSEDQLGDCAKMLARFHSDGGGVEKSKLKAVYKKFSSSDRSSVA 428

Query: 525 LVPPGK 542
           L PP +
Sbjct: 429 LFPPAR 434


Top