BLASTX nr result
ID: Bupleurum21_contig00003621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003621
(3679 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [... 734 0.0
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ... 715 0.0
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2... 714 0.0
gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum] 707 0.0
ref|XP_001769905.1| predicted protein [Physcomitrella patens sub... 664 0.0
>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
gi|297745752|emb|CBI15808.3| unnamed protein product
[Vitis vinifera]
Length = 568
Score = 734 bits (1894), Expect = 0.0
Identities = 398/569 (69%), Positives = 441/569 (77%), Gaps = 15/569 (2%)
Frame = +1
Query: 1678 MSYVPPHLRTSSSSATKTLE---------------TNGNHYSSNSSNKINYLXXXXXXXX 1812
MSYVPPHLR SSS ++T + TN YSS +S +L
Sbjct: 1 MSYVPPHLRNPSSSISRTSKPTETSAVTLDDTHRTTNNLSYSSTNS----HLSHSNASSS 56
Query: 1813 XXXXXXXXXXTAARRSSDNLFPPPDSVVPQWKPSERVLALTPEQIEEVRLRLNVDVXXXX 1992
AA + ++ P+ V PQWKPS+RV + PEQIEEVRLRLNVDV
Sbjct: 57 PSLSRWASSNAAAVPRTPSV---PEPVFPQWKPSDRVFLMKPEQIEEVRLRLNVDVTVAP 113
Query: 1993 XXXXXXXXXXXFTDMCLDSRIMKDIAYHEYTTPTSIQAQAMPIALSGRDLLGCAETGSGK 2172
FTDM L IMKDI +HEYT PT IQAQAMP+ALSGRDLLGCAETGSGK
Sbjct: 114 DLPPAPAPIESFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGK 173
Query: 2173 TAAFTIPMIEHCLAQTNVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVG 2352
TAAF IPMI+HCLAQ VRRGDGPLALVLAPTRELAQQIEKEVKAFSRSL+SF+TAIVVG
Sbjct: 174 TAAFAIPMIQHCLAQPPVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVG 233
Query: 2353 GTNIAEQRSELRAGVNIVVGTPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIR 2532
GTNI+EQRSELRAGVNIVV TPGRFI HLQ+GNTSLSRIS+VVLDEADRMLDMGFEPQIR
Sbjct: 234 GTNISEQRSELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIR 293
Query: 2533 EVMRNLPSKHQTLLFSATMPLEIEALAQEYLTDPVQVKVGKVSSPTANVSQILEKVIEHE 2712
EVM+NLP KHQTLLFSATMP+EIE LAQEYL +PVQVKVGKVS PTANVSQILEKV E E
Sbjct: 294 EVMQNLPQKHQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESE 353
Query: 2713 KIDRLLGLLVEEATQAERSGRSLPLTIVFVERKTRCDEVAEALVAQGLHAVALHGGRTQS 2892
KID LL LLVEEA+QAER GR PLTIVFVERKTRCDEVAEALVAQGL AVALHGGR+Q+
Sbjct: 354 KIDGLLALLVEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQA 413
Query: 2893 EREAALRDFRNGPTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIXXXXXXXXX 3072
EREAALRDFRNG T+ILVATDVASRGLDVTGV+HVINLDLPK ME+YVHRI
Sbjct: 414 EREAALRDFRNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGST 473
Query: 3073 XXXXXFYTDRDMFLVAQIRKAISDVQSGNTVAFATGKVARKKEREAVAAQRDARTTLSKQ 3252
FYTDRD+FLVA IRKAI+DV SGNTVAFATGKVARKKEREA AAQ++AR LS
Sbjct: 474 GQATSFYTDRDVFLVAHIRKAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNL 533
Query: 3253 PSIGAMSISVEDKYKYMIASPTAKKEGSA 3339
+G S+++E+KY++M++ + K EG+A
Sbjct: 534 SLMGPTSLNIEEKYRFMMSPSSIKTEGAA 562
>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 564
Score = 715 bits (1845), Expect = 0.0
Identities = 379/560 (67%), Positives = 433/560 (77%), Gaps = 6/560 (1%)
Frame = +1
Query: 1678 MSYVPPHLRTSSSSATKTLETNGNHYSSNSSN------KINYLXXXXXXXXXXXXXXXXX 1839
MSYVPPHLR S+++ T T T ++ +S+ L
Sbjct: 1 MSYVPPHLRNSTATTTTTTTTTTTTTTTITSSITLENDHSTKLSTSTWKSLSSTLSNGSR 60
Query: 1840 XTAARRSSDNLFPPPDSVVPQWKPSERVLALTPEQIEEVRLRLNVDVXXXXXXXXXXXXX 2019
T A +S PD V+PQW PSERVL L +Q+E+VR RLN++V
Sbjct: 61 RTTAAFTSPRTLSVPDPVLPQWTPSERVLRLNSQQVEDVRARLNIEVTVASGSPPAPAPI 120
Query: 2020 XXFTDMCLDSRIMKDIAYHEYTTPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 2199
F DMCL+ IMKDIAYH YT PT IQ QAM ++LSGRDLL CAETGSGKTAAFTIPMI
Sbjct: 121 ESFEDMCLNQNIMKDIAYHGYTRPTPIQVQAMTVSLSGRDLLACAETGSGKTAAFTIPMI 180
Query: 2200 EHCLAQTNVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIAEQRS 2379
+HCLAQ+ +RRGDGPLALVLAPTRELAQQIEKEVK FSRSL+SF+TAIVVGGTNIA+QRS
Sbjct: 181 QHCLAQSPIRRGDGPLALVLAPTRELAQQIEKEVKCFSRSLDSFRTAIVVGGTNIADQRS 240
Query: 2380 ELRAGVNIVVGTPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREVMRNLPSK 2559
ELRAGV+I+V TPGRFIDHLQQGNTSLSRIS++VLDEADRMLDMGFEPQIREV+ NLP +
Sbjct: 241 ELRAGVDIMVATPGRFIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVLHNLPER 300
Query: 2560 HQTLLFSATMPLEIEALAQEYLTDPVQVKVGKVSSPTANVSQILEKVIEHEKIDRLLGLL 2739
HQTLLFSATMP EIE LAQEYLT PVQVKVGKVS TANVSQ+L+KV E EKID LLGLL
Sbjct: 301 HQTLLFSATMPEEIETLAQEYLTTPVQVKVGKVSGLTANVSQVLKKVSESEKIDCLLGLL 360
Query: 2740 VEEATQAERSGRSLPLTIVFVERKTRCDEVAEALVAQGLHAVALHGGRTQSEREAALRDF 2919
VE+A+QAER+ PLT+VFV+RK RCDEVAEALVAQGL AVALHGGR+Q+EREAAL DF
Sbjct: 361 VEDASQAERADHPFPLTVVFVDRKARCDEVAEALVAQGLRAVALHGGRSQNEREAALHDF 420
Query: 2920 RNGPTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIXXXXXXXXXXXXXXFYTD 3099
R+G T ILVATDVASRGLDVTGV+HVINLDLPKTMEDYVHR+ FYTD
Sbjct: 421 RSGSTDILVATDVASRGLDVTGVTHVINLDLPKTMEDYVHRVGRTGRAGSAGQATSFYTD 480
Query: 3100 RDMFLVAQIRKAISDVQSGNTVAFATGKVARKKEREAVAAQRDARTTLSKQPSIGAMSIS 3279
RD+FLVAQI+KAI+DV+SGNTVAFATGKVAR+KEREA A+Q++AR LSK +G SI+
Sbjct: 481 RDLFLVAQIKKAIADVKSGNTVAFATGKVARRKEREAAASQKEARNDLSK--LLGPTSIN 538
Query: 3280 VEDKYKYMIASPTAKKEGSA 3339
+EDKY++MIAS K EG A
Sbjct: 539 IEDKYRFMIASSNTKGEGVA 558
>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
predicted protein [Populus trichocarpa]
Length = 559
Score = 714 bits (1843), Expect = 0.0
Identities = 388/567 (68%), Positives = 434/567 (76%), Gaps = 13/567 (2%)
Frame = +1
Query: 1678 MSYVPPHLRTSSSSATKTL---------ETNGNHYSSNSSNKINYLXXXXXXXXXXXXXX 1830
MSY+PPHLR SSS+AT T +TN + S+SS+ N
Sbjct: 1 MSYIPPHLRNSSSNATITASRAHSVPPTDTNDHPNLSHSSSNFN------------TSSS 48
Query: 1831 XXXXTAARRSS---DNLFPPPDSVVPQWKPSERVLALTPEQIEEVRLRLNVDVXXXXXXX 2001
+ +RRSS P V P W PS+RVL P+QI E+R RLN+DV
Sbjct: 49 TTFASPSRRSSGAFSRTISVPQPVFPNWTPSDRVLRFNPDQIAEIRSRLNIDVSVASGSP 108
Query: 2002 XXXXXXXXFTDMCLDSRIMKDIAYHEYTTPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 2181
F DMCL IMKDIA+HEYT PTSIQAQAM +ALSGRDLLGCAETGSGKTAA
Sbjct: 109 LAPAAIESFEDMCLHQSIMKDIAHHEYTRPTSIQAQAMTVALSGRDLLGCAETGSGKTAA 168
Query: 2182 FTIPMIEHCLAQTNVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 2361
FTIPMI+HCLAQ VRRGDGPLALVLAPTRELAQQIEKEVK FSRSLESF+TAIVVGGTN
Sbjct: 169 FTIPMIQHCLAQPTVRRGDGPLALVLAPTRELAQQIEKEVKGFSRSLESFRTAIVVGGTN 228
Query: 2362 IAEQRSELRAGVNIVVGTPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREVM 2541
IA+QR ELRAGV+++V TPGR IDHLQQGNTSLSRIS++VLDEADRMLDMGFEPQIREVM
Sbjct: 229 IADQRLELRAGVDVIVATPGRLIDHLQQGNTSLSRISFIVLDEADRMLDMGFEPQIREVM 288
Query: 2542 RNLPSKHQTLLFSATMPLEIEALAQEYLTDPVQVKVGKVSSPTANVSQILEKVIEHEKID 2721
RNLP KHQTLLFSATMP+EIE L QEYLT PVQV+VGKVSSPTANVSQIL KV E EKID
Sbjct: 289 RNLPEKHQTLLFSATMPVEIETLTQEYLTSPVQVRVGKVSSPTANVSQILTKVSESEKID 348
Query: 2722 RLLGLLVEEATQAERSGRSLPLTIVFVERKTRCDEVAEALVAQGLHAVALHGGRTQSERE 2901
LL LLVE+A+QAERS + PLTIVFVERKTRC+EVAEALVAQ L AVALHGGR+QS+RE
Sbjct: 349 CLLALLVEDASQAERSNQPFPLTIVFVERKTRCNEVAEALVAQALQAVALHGGRSQSDRE 408
Query: 2902 AALRDFRNGPTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIXXXXXXXXXXXX 3081
AALRDFR+G TSILVATDVASRGLDVTGV+HVINLDLPKTMEDYVHRI
Sbjct: 409 AALRDFRSGSTSILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQA 468
Query: 3082 XXFYTDRDMFLVAQIRKAISDVQSGNTVAFATGKVARKKEREAVAA-QRDARTTLSKQPS 3258
FYTD+D+FLVAQI+KAI+DV+SGNTVAFATGK AR+KEREA AA ++AR SK
Sbjct: 469 TSFYTDQDLFLVAQIKKAIADVESGNTVAFATGKTARRKEREAAAALHKEARNDPSK--V 526
Query: 3259 IGAMSISVEDKYKYMIASPTAKKEGSA 3339
G I++EDKY++M+A K EG+A
Sbjct: 527 TGPACINIEDKYRFMMAPSIIKSEGAA 553
>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
Length = 622
Score = 707 bits (1825), Expect = 0.0
Identities = 377/561 (67%), Positives = 430/561 (76%), Gaps = 8/561 (1%)
Frame = +1
Query: 1678 MSYVPPHLRTSSSSATKTLET--------NGNHYSSNSSNKINYLXXXXXXXXXXXXXXX 1833
MSYVPPHLR +SS+A T + +H+++N + +Y
Sbjct: 1 MSYVPPHLRNASSTAVATTTRPSASSGTLDHHHHNTNLAFSSSY----PHSNSSSLANGS 56
Query: 1834 XXXTAARRSSDNLFPPPDSVVPQWKPSERVLALTPEQIEEVRLRLNVDVXXXXXXXXXXX 2013
+AA + L PD+V P W+PSERV + P+QIEEV +RLN+DV
Sbjct: 57 RRTSAATSAISELVTVPDTVFPNWQPSERVSRMNPDQIEEV-VRLNLDVTVSSDSTAAPG 115
Query: 2014 XXXXFTDMCLDSRIMKDIAYHEYTTPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIP 2193
F DMCL IMKDIAYHEYT P+SIQAQAMPIALSGRDLLGCAETGSGKTAAFTIP
Sbjct: 116 PIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIP 175
Query: 2194 MIEHCLAQTNVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIAEQ 2373
M++HCL Q +RRGDGPLALVLAPTRELAQQIEKEV+AFSRSLES K IVVGGTNI +Q
Sbjct: 176 MLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQ 235
Query: 2374 RSELRAGVNIVVGTPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREVMRNLP 2553
RSELRAGV I V TPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIRE+MR+LP
Sbjct: 236 RSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLP 295
Query: 2554 SKHQTLLFSATMPLEIEALAQEYLTDPVQVKVGKVSSPTANVSQILEKVIEHEKIDRLLG 2733
KHQTLLFSATMP+EIEALA+EYL +PVQVKVGKVSSPT NVSQ L KV EKIDRLL
Sbjct: 296 EKHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVSGSEKIDRLLD 355
Query: 2734 LLVEEATQAERSGRSLPLTIVFVERKTRCDEVAEALVAQGLHAVALHGGRTQSEREAALR 2913
LLVEEA+QAE+ G PLTIVFVERKTRCDEVAEALVAQGL AV+LHGG +Q+EREAAL+
Sbjct: 356 LLVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGHSQNEREAALQ 415
Query: 2914 DFRNGPTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIXXXXXXXXXXXXXXFY 3093
+FR+ TSILVATDVASRGLDVTGVSHVINLDLPKT EDY+HRI FY
Sbjct: 416 NFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFY 475
Query: 3094 TDRDMFLVAQIRKAISDVQSGNTVAFATGKVARKKEREAVAAQRDARTTLSKQPSIGAMS 3273
TDRDMFLV IRKAI+D +SGN VAFATGKVAR+KE+EA AA ++A S+ +GA S
Sbjct: 476 TDRDMFLVTNIRKAIADAESGNAVAFATGKVARRKEKEAAAAHKEANIASSRHLGLGAAS 535
Query: 3274 ISVEDKYKYMIASPTAKKEGS 3336
I++EDKY++MIA+ ++ EG+
Sbjct: 536 INIEDKYRFMIAASNSRGEGA 556
>ref|XP_001769905.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168034871|ref|XP_001769935.1| predicted protein
[Physcomitrella patens subsp. patens]
gi|162678811|gb|EDQ65265.1| predicted protein
[Physcomitrella patens subsp. patens]
gi|162678841|gb|EDQ65295.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 582
Score = 664 bits (1712), Expect = 0.0
Identities = 358/572 (62%), Positives = 417/572 (72%), Gaps = 20/572 (3%)
Frame = +1
Query: 1678 MSYVPPHLRTSSSSATKTLETNG---------NHYSSN---------SSNKINYLXXXXX 1803
M YVPPHLR ++SA + G + Y + SS+++++
Sbjct: 1 MPYVPPHLRAGAASAGAAPASGGAARRDGGGRDSYGGSFGASAGARRSSSEVSFGNGGSS 60
Query: 1804 XXXXXXXXXXXXXTAARRSSDNLFPP--PDSVVPQWKPSERVLALTPEQIEEVRLRLNVD 1977
++ S + P+ V W+PSERV L PEQI EVR RLNVD
Sbjct: 61 YGNGYGQGSRESSGGSKEGSGGVRGAGHPEVVWATWQPSERVQKLQPEQIAEVRARLNVD 120
Query: 1978 VXXXXXXXXXXXXXXXFTDMCLDSRIMKDIAYHEYTTPTSIQAQAMPIALSGRDLLGCAE 2157
V F DMCL IMKD+ +H YTTPT IQAQA+P+ALSGRDLLGCAE
Sbjct: 121 VEIATGSEPAPAPIESFEDMCLHLSIMKDVTFHNYTTPTPIQAQALPVALSGRDLLGCAE 180
Query: 2158 TGSGKTAAFTIPMIEHCLAQTNVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKT 2337
TGSGKTAAF++PMI+HCLAQ +RRGDGPLALVLAPTRELAQQIEKEVKAF RS E F+T
Sbjct: 181 TGSGKTAAFSLPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFCRSAEGFRT 240
Query: 2338 AIVVGGTNIAEQRSELRAGVNIVVGTPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGF 2517
AIVVGGTNI EQRSELRAGV IVV TPGRFIDHLQQGN+SLSR+SYVVLDEADRMLDMGF
Sbjct: 241 AIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNSSLSRVSYVVLDEADRMLDMGF 300
Query: 2518 EPQIREVMRNLPSKHQTLLFSATMPLEIEALAQEYLTDPVQVKVGKVSSPTANVSQILEK 2697
EPQIREVMR+LP KHQTLLFSATMP EIEALAQEYL +P++VKVG+VSSPTANV+Q LEK
Sbjct: 301 EPQIREVMRSLPKKHQTLLFSATMPEEIEALAQEYLDNPIRVKVGRVSSPTANVTQNLEK 360
Query: 2698 VIEHEKIDRLLGLLVEEATQAERSGRSLPLTIVFVERKTRCDEVAEALVAQGLHAVALHG 2877
+ E EKI+ LL LLV+E +Q+ + + PLTIVFVERK RCDEV +ALV QGL A ALHG
Sbjct: 361 ITEKEKIESLLALLVDEHSQSLDTNQPPPLTIVFVERKARCDEVTDALVEQGLKATALHG 420
Query: 2878 GRTQSEREAALRDFRNGPTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIXXXX 3057
GR+QSEREAALRDFR G T+ILVATDVASRGLDVTGV+HVINLDLPKTMEDYVHRI
Sbjct: 421 GRSQSEREAALRDFRKGTTNILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTG 480
Query: 3058 XXXXXXXXXXFYTDRDMFLVAQIRKAISDVQSGNTVAFATGKVARKKEREAVAAQRDART 3237
FYT+RDMFLVAQIR+AI++ +SGN +AFATGK AR+KERE AA R+ R
Sbjct: 481 RAGASGRATSFYTERDMFLVAQIRRAITEAESGNAMAFATGKAARRKEREQAAAFREGRV 540
Query: 3238 TLSKQPSIGAMSISVEDKYKYMIASPTAKKEG 3333
IGA ++ V+DKYK+M+++ K+G
Sbjct: 541 APLGVAQIGATTVRVDDKYKHMLSAAADPKKG 572