BLASTX nr result

ID: Bupleurum21_contig00003584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003584
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36774.1| unknown [Lotus japonicus]                              115   5e-24
ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
gb|AFK36367.1| unknown [Medicago truncatula]                          114   1e-23
ref|XP_003628825.1| 50S ribosomal protein L11 [Medicago truncatu...   114   1e-23
ref|XP_003601447.1| 50S ribosomal protein L11 [Medicago truncatu...   114   1e-23

>gb|AFK36774.1| unknown [Lotus japonicus]
          Length = 223

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/61 (86%), Positives = 60/61 (98%)
 Frame = +1

Query: 1   KDPKMQKVGKVTIDQLRTIATEKLPDLNCSSIESAMRIIAGTAANMGIDIDPPILEPKVK 180
           KDP MQKVGKVTIDQ+RTIATEKLPDLNCS++ESAMRIIAGTAANMGID+DPP+LEPK+K
Sbjct: 160 KDPNMQKVGKVTIDQVRTIATEKLPDLNCSTLESAMRIIAGTAANMGIDVDPPVLEPKIK 219

Query: 181 Q 183
           +
Sbjct: 220 E 220


>ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/60 (91%), Positives = 59/60 (98%)
 Frame = +1

Query: 1   KDPKMQKVGKVTIDQLRTIATEKLPDLNCSSIESAMRIIAGTAANMGIDIDPPILEPKVK 180
           KDPKM+KVGKVTIDQLRTIATEKLPDLNC++IESAMRIIAGTAANMGID+DPPILEPK K
Sbjct: 112 KDPKMEKVGKVTIDQLRTIATEKLPDLNCTTIESAMRIIAGTAANMGIDVDPPILEPKKK 171


>gb|AFK36367.1| unknown [Medicago truncatula]
          Length = 197

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +1

Query: 1   KDPKMQKVGKVTIDQLRTIATEKLPDLNCSSIESAMRIIAGTAANMGIDIDPPILEPKVK 180
           KDPK QKVGKVTIDQLRTIA+EKLPDLNC ++ESAMRIIAGTAANMGID+DPPILEPK K
Sbjct: 135 KDPKAQKVGKVTIDQLRTIASEKLPDLNCETMESAMRIIAGTAANMGIDVDPPILEPKQK 194

Query: 181 QLV 189
           QL+
Sbjct: 195 QLL 197


>ref|XP_003628825.1| 50S ribosomal protein L11 [Medicago truncatula]
           gi|355522847|gb|AET03301.1| 50S ribosomal protein L11
           [Medicago truncatula]
          Length = 100

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +1

Query: 1   KDPKMQKVGKVTIDQLRTIATEKLPDLNCSSIESAMRIIAGTAANMGIDIDPPILEPKVK 180
           KDPK QKVGKVTIDQLRTIA+EKLPDLNC ++ESAMRIIAGTAANMGID+DPPILEPK K
Sbjct: 38  KDPKAQKVGKVTIDQLRTIASEKLPDLNCETMESAMRIIAGTAANMGIDVDPPILEPKQK 97

Query: 181 QLV 189
           QL+
Sbjct: 98  QLL 100


>ref|XP_003601447.1| 50S ribosomal protein L11 [Medicago truncatula]
           gi|355490495|gb|AES71698.1| 50S ribosomal protein L11
           [Medicago truncatula]
          Length = 197

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/63 (87%), Positives = 60/63 (95%)
 Frame = +1

Query: 1   KDPKMQKVGKVTIDQLRTIATEKLPDLNCSSIESAMRIIAGTAANMGIDIDPPILEPKVK 180
           KDPK QKVGKVTIDQLRTIA+EKLPDLNC ++ESAMRIIAGTAANMGID+DPPILEPK K
Sbjct: 135 KDPKAQKVGKVTIDQLRTIASEKLPDLNCETMESAMRIIAGTAANMGIDVDPPILEPKQK 194

Query: 181 QLV 189
           QL+
Sbjct: 195 QLL 197


Top