BLASTX nr result

ID: Bupleurum21_contig00003570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003570
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protei...   172   8e-41
ref|XP_002530530.1| conserved hypothetical protein [Ricinus comm...   154   2e-35
gb|ABK94697.1| unknown [Populus trichocarpa]                          149   4e-34
gb|ABK96088.1| unknown [Populus trichocarpa]                          147   2e-33
ref|XP_002323408.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33

>ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
           gi|297740156|emb|CBI30338.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score =  172 bits (435), Expect = 8e-41
 Identities = 99/246 (40%), Positives = 133/246 (54%), Gaps = 7/246 (2%)
 Frame = +2

Query: 2   SQEVNGIWFYNSHECEDVANLFNRILNAYAXXXXXXXXXXXXXEFDELEAVPTSSVIEES 181
           +QEVNGIWFYNS ECE+VANLF+RILNAY+             EF+ELEAVPT +V+E  
Sbjct: 109 AQEVNGIWFYNSRECEEVANLFSRILNAYSKVPPKPKLSSSKSEFEELEAVPTMAVMEGM 168

Query: 182 QE-AAFRKTSANVPEDSSFMNFFNTATXXXXXXXXXXXXXQLG----PIPVSSHVPIVAP 346
            E ++    + + PEDS+F+NFF  A              Q       +P  SH P V P
Sbjct: 169 LEPSSTASATTDAPEDSTFVNFFGAAMNIGSNTSNVANSGQSYQPSITVPSFSHAPSVVP 228

Query: 347 APAPTLQIPTHPLSAAHSSQIPLNNMPDPVNSNSHVTNLLTPXXXXXXXXXXXAQLTPLV 526
           +P PTLQ+P+ P SA+ +  +P++  PDP++S++  TNL+ P           A + P +
Sbjct: 229 SPVPTLQVPSLPRSASSTPPLPIHETPDPISSSNLATNLVKPSSFFAPPSSSSALIMPPM 288

Query: 527 SPAMPNV-LHPPLNAQRPHGTXXXXXXXXXXXXXXXXXXXXXXXNYGS-LSRDHVRDALS 700
             +MP   LHPPLN QRP+G                        NYG  ++RD VRDAL 
Sbjct: 289 PSSMPTAGLHPPLNLQRPYGAPMLQPFPPPAPPASLTPTSSPSPNYGPVINRDKVRDALL 348

Query: 701 VLVQDN 718
           +L QDN
Sbjct: 349 LLAQDN 354


>ref|XP_002530530.1| conserved hypothetical protein [Ricinus communis]
           gi|223529934|gb|EEF31862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  154 bits (388), Expect = 2e-35
 Identities = 101/246 (41%), Positives = 130/246 (52%), Gaps = 7/246 (2%)
 Frame = +2

Query: 2   SQEVNGIWFYNSHECEDVANLFNRILNAYAXXXXXXXXXXXXXEFDELEAVPTSSVIEES 181
           +QEVNGIWFYNS ECE+VANLF RILNAY+             EF+ELEAVP+ SVIE  
Sbjct: 109 AQEVNGIWFYNSRECEEVANLFTRILNAYSKVPPKSKVPSSKSEFEELEAVPSMSVIEGP 168

Query: 182 QEAAFRKTSA-NVPEDSSFMNFFNTATXXXXXXXXXXXXXQLGP----IPVSSHVPIVAP 346
            E +   ++A + PEDSSF +FF  AT             Q  P    +P+SSH P +  
Sbjct: 169 LEPSSTASAATDGPEDSSFESFFTAATNIGSSASNLANSRQPYPSPATVPLSSHAPNIVL 228

Query: 347 APAPTLQIPTHPLSAAHSSQIPLNNMPDPVNSNSHVTNLLTPXXXXXXXXXXXAQLTPLV 526
            P+ T QIPT  LS   +S + +   PDP++S++ VTNL+ P           A + P +
Sbjct: 229 PPSQTPQIPTLSLSPLPAS-VTIRETPDPISSSNRVTNLVKP-SSFFTPPSSSAPVAPPI 286

Query: 527 SPAMPNV--LHPPLNAQRPHGTXXXXXXXXXXXXXXXXXXXXXXXNYGSLSRDHVRDALS 700
           S A+P    LHPPLN QRP+GT                           ++RD VRDAL 
Sbjct: 287 SSAVPTAPSLHPPLNLQRPYGT--PMLQPFPPPTPPPSLTPSSATTMPVINRDKVRDALL 344

Query: 701 VLVQDN 718
            LVQD+
Sbjct: 345 TLVQDD 350


>gb|ABK94697.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  149 bits (377), Expect = 4e-34
 Identities = 100/246 (40%), Positives = 125/246 (50%), Gaps = 7/246 (2%)
 Frame = +2

Query: 2   SQEVNGIWFYNSHECEDVANLFNRILNAYAXXXXXXXXXXXXXEFDELEAVPTSSVIEES 181
           SQEVNGIWFYN  ECEDVANLF RILNAY+             EF++LEAVP  SV E  
Sbjct: 109 SQEVNGIWFYNPRECEDVANLFTRILNAYSKVPAKPKVASGKSEFEDLEAVPNMSVFEGP 168

Query: 182 QEAAFRKTSAN-VPEDSSFMNFFNTA-TXXXXXXXXXXXXXQLGPIP---VSSHVPIVAP 346
            E +   ++AN   EDSSF NFF+TA               Q  P P   +SSH P V  
Sbjct: 169 LEPSSTASAANDSAEDSSFENFFSTAMNIGSTASTVTNSRQQYQPSPTILLSSHTPNVVM 228

Query: 347 APAPTLQIPTHPLSAAHSSQIPLNNMPDPVNSNSHVTNLLTPXXXXXXXXXXXAQLTPLV 526
             AP  QIP+ PLS+  +S+  ++  PDP++S SHV NL+ P           A + P +
Sbjct: 229 PSAPVPQIPSLPLSSLTTSK-SIHGPPDPISSGSHVANLVKPSSFFAPPSSSSALMAPPL 287

Query: 527 SPAMPNV--LHPPLNAQRPHGTXXXXXXXXXXXXXXXXXXXXXXXNYGSLSRDHVRDALS 700
           S  +P+   L PPLN QRP+GT                           + RD VRDAL 
Sbjct: 288 SSPLPSAPSLQPPLNLQRPYGTPMLQPFPPPAPPPSLTPSSTTTPPL--IGRDEVRDALL 345

Query: 701 VLVQDN 718
           +L QD+
Sbjct: 346 MLAQDD 351


>gb|ABK96088.1| unknown [Populus trichocarpa]
          Length = 289

 Score =  147 bits (372), Expect = 2e-33
 Identities = 101/246 (41%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
 Frame = +2

Query: 2   SQEVNGIWFYNSHECEDVANLFNRILNAYAXXXXXXXXXXXXXEFDELEAVPTSSVIEES 181
           SQEVNGIWFYN  ECEDVANLF RILNAY+             E++ELEAVP  SV E  
Sbjct: 32  SQEVNGIWFYNRRECEDVANLFTRILNAYSKVPAKPKVASGKSEYEELEAVPNMSVFEGP 91

Query: 182 QEAAFRKTSAN-VPEDSSFMNFFNTATXXXXXXXXXXXXXQ----LGPIPVSSHVP-IVA 343
            E +   ++AN   EDSSF NFF+TA              Q       IP+SSH P +V 
Sbjct: 92  LEPSSTASAANDSTEDSSFENFFSTAMNIGSTASSVANSRQPYQPSPTIPLSSHTPSVVM 151

Query: 344 PAPAPTLQIPTHPLSAAHSSQIPLNNMPDPVNSNSHVTNLLTPXXXXXXXXXXXAQLTPL 523
           P+P    QIP+ PLS+  +S+  ++  PDP++S SHVTNL+ P               P+
Sbjct: 152 PSPL-VPQIPSLPLSSLSTSK-TIHGTPDPISSGSHVTNLVKPSFFAPLSSSSVLLPPPI 209

Query: 524 VSP-AMPNVLHPPLNAQRPHGTXXXXXXXXXXXXXXXXXXXXXXXNYGSLSRDHVRDALS 700
            SP      L PPLN QRP+GT                           +SRD VRDAL 
Sbjct: 210 SSPLTSAPALQPPLNLQRPYGTPMLQPFPPPTPPPSLTPSSTATTPL--ISRDKVRDALL 267

Query: 701 VLVQDN 718
           +L+QD+
Sbjct: 268 MLIQDD 273


>ref|XP_002323408.1| predicted protein [Populus trichocarpa] gi|222868038|gb|EEF05169.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  146 bits (369), Expect = 4e-33
 Identities = 99/246 (40%), Positives = 124/246 (50%), Gaps = 7/246 (2%)
 Frame = +2

Query: 2   SQEVNGIWFYNSHECEDVANLFNRILNAYAXXXXXXXXXXXXXEFDELEAVPTSSVIEES 181
           SQEVNGIWFYN  ECEDVANLF RILNAY+             EF++LEAV   SV E  
Sbjct: 109 SQEVNGIWFYNPRECEDVANLFTRILNAYSKVPAKPKVASGKSEFEDLEAVTNMSVFEGP 168

Query: 182 QEAAFRKTSAN-VPEDSSFMNFFNTA-TXXXXXXXXXXXXXQLGPIP---VSSHVPIVAP 346
            E +   ++AN   EDSSF NFF+TA               Q  P P   +SSH P V  
Sbjct: 169 LEPSSTASAANDSSEDSSFENFFSTAMNIGSTASTVTNSRQQYQPSPTILLSSHTPNVVM 228

Query: 347 APAPTLQIPTHPLSAAHSSQIPLNNMPDPVNSNSHVTNLLTPXXXXXXXXXXXAQLTPLV 526
             AP  QIP+ PLS+  +S+  ++  PDP++S SHV NL+ P           A + P +
Sbjct: 229 PSAPVPQIPSLPLSSLTTSK-SIHGPPDPISSGSHVANLVKPSSFFAPPSSSSALMAPPL 287

Query: 527 SPAMPNV--LHPPLNAQRPHGTXXXXXXXXXXXXXXXXXXXXXXXNYGSLSRDHVRDALS 700
           S  +P+   L PPLN QRP+GT                           + RD VRDAL 
Sbjct: 288 SSPLPSAPSLQPPLNLQRPYGTPMLQPFPPPAPPPSLTPSSTTTPPL--IGRDEVRDALL 345

Query: 701 VLVQDN 718
           +L QD+
Sbjct: 346 MLAQDD 351


Top