BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003563
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48388.1| unknown [Lotus japonicus]                              106   2e-21
ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japonica Group] g...   105   3e-21
sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subun...   105   4e-21
ref|XP_003579252.1| PREDICTED: cytochrome c oxidase subunit 5C-l...   105   4e-21
ref|XP_003562412.1| PREDICTED: cytochrome c oxidase subunit 5C-l...   105   5e-21

>gb|AFK48388.1| unknown [Lotus japonicus]
          Length = 64

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/64 (79%), Positives = 56/64 (87%)
 Frame = -2

Query: 241 MAGGRVAHATLAGGPSVVKEIVIATVLGMCAGGLWKMHHWNEQKKTRTFYDLLEKGKIGV 62
           MAG R+AHATL G PSVVKEIVI  VLG+ AG +WKMHHWNEQ+KTRTFYDLLEKG+IGV
Sbjct: 1   MAGPRIAHATLKG-PSVVKEIVIGMVLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEIGV 59

Query: 61  VVEE 50
           V EE
Sbjct: 60  VAEE 63


>ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japonica Group]
           gi|48428177|sp|Q9SXX7.3|COX5C_ORYSJ RecName:
           Full=Cytochrome c oxidase subunit 5C; AltName:
           Full=Cytochrome c oxidase polypeptide Vc
           gi|4850330|dbj|BAA77682.1| cytochrome c oxidase subunit
           5c [Oryza sativa Japonica Group]
           gi|113649528|dbj|BAF30040.1| Os12g0561000 [Oryza sativa
           Japonica Group] gi|125579724|gb|EAZ20870.1| hypothetical
           protein OsJ_36508 [Oryza sativa Japonica Group]
          Length = 63

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = -2

Query: 241 MAGGRVAHATLAGGPSVVKEIVIATVLGMCAGGLWKMHHWNEQKKTRTFYDLLEKGKIGV 62
           MAGGR+AHATL G PSVVKEI I   LG+ AGGLWKMHHWNEQ+KTR+FYD+LEKG+I V
Sbjct: 1   MAGGRIAHATLKG-PSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISV 59

Query: 61  VVEE 50
           VVEE
Sbjct: 60  VVEE 63


>sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subunit 5C-2; AltName:
           Full=Cytochrome c oxidase polypeptide Vc-2
           gi|18409602|gb|AAL67939.1| cytochrome c oxidase subunit
           5c [Helianthus annuus]
          Length = 64

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = -2

Query: 241 MAGGRVAHATLAGGPSVVKEIVIATVLGMCAGGLWKMHHWNEQKKTRTFYDLLEKGKIGV 62
           M GGRVAH  L G PSVVKE+VI TVLG+ AGGLWKMHHWNEQ+KTR FYDLLEKG+I V
Sbjct: 1   MGGGRVAHPVLKG-PSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISV 59

Query: 61  VVEE 50
           VV+E
Sbjct: 60  VVDE 63


>ref|XP_003579252.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Brachypodium
           distachyon] gi|357161935|ref|XP_003579253.1| PREDICTED:
           cytochrome c oxidase subunit 5C-like [Brachypodium
           distachyon] gi|2493852|sp|Q42841.3|COX5C_HORVU RecName:
           Full=Cytochrome c oxidase subunit 5C; AltName:
           Full=Cytochrome c oxidase polypeptide Vc
           gi|1070356|emb|CAA92107.1| cytochrome c oxidase, Vc
           subunit [Hordeum vulgare subsp. vulgare]
          Length = 63

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = -2

Query: 241 MAGGRVAHATLAGGPSVVKEIVIATVLGMCAGGLWKMHHWNEQKKTRTFYDLLEKGKIGV 62
           MAGGRVAHATL G PSVVKEI I   LG+ AGG+WKMHHWNEQ+KTR+FYD+LEKG+I V
Sbjct: 1   MAGGRVAHATLKG-PSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISV 59

Query: 61  VVEE 50
           VVEE
Sbjct: 60  VVEE 63


>ref|XP_003562412.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Brachypodium
           distachyon]
          Length = 66

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/66 (74%), Positives = 57/66 (86%), Gaps = 2/66 (3%)
 Frame = -2

Query: 241 MAGGRVAHATLAG--GPSVVKEIVIATVLGMCAGGLWKMHHWNEQKKTRTFYDLLEKGKI 68
           MAGGRVAHATL G  GPSVVKEI I   LG+ AGG+WKMHHWNEQ+KTR+FYD+L+KG+I
Sbjct: 1   MAGGRVAHATLKGKAGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLDKGQI 60

Query: 67  GVVVEE 50
            VVV+E
Sbjct: 61  SVVVQE 66