BLASTX nr result

ID: Bupleurum21_contig00003562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003562
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525353.1| conserved hypothetical protein [Ricinus comm...   261   2e-67
ref|XP_003517728.1| PREDICTED: uncharacterized protein LOC100809...   229   1e-57
ref|XP_003519679.1| PREDICTED: uncharacterized protein LOC100803...   217   4e-54
ref|XP_003574484.1| PREDICTED: uncharacterized protein LOC100842...   216   7e-54
dbj|BAC98582.1| putative RNA-binding region RNP-1 and Splicing f...   206   7e-51

>ref|XP_002525353.1| conserved hypothetical protein [Ricinus communis]
            gi|223535316|gb|EEF36991.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 948

 Score =  261 bits (667), Expect = 2e-67
 Identities = 159/313 (50%), Positives = 189/313 (60%), Gaps = 8/313 (2%)
 Frame = -2

Query: 1086 GIPRYPGVYP-MVRPIYPPRPMGIVGINPALAXXXXXXXXXXXXXXXXXXXXXPSVTPAE 910
            GI RYP  YP MVRP++PPRP+G +GI PA A                     PSVTPAE
Sbjct: 175  GIQRYPSPYPAMVRPMFPPRPLGALGILPA-ASRLLVPGIPGVRPVPIVRPGVPSVTPAE 233

Query: 909  KPQTTVYVGKIASTVDNDFILSVLQLCGIVKSWKRPQDPTSGTLKGYGFCEFDSAEGILR 730
            KP TTVYVGKIA TVDNDF+LS+L+ CG VKSWKRPQDP  GT +G+GFCEF+SAEG+LR
Sbjct: 234  KPLTTVYVGKIAPTVDNDFMLSLLRFCGPVKSWKRPQDPNDGTPRGFGFCEFESAEGVLR 293

Query: 729  AIRLLSKLNIDGQELMLNFNSATKEYLERYVEKKRE---NMKKSEAVGTXXXXXXXXXXX 559
            A+RLLSK NIDGQEL+LN N AT+EYLERYVEKK E   N+K+++A G            
Sbjct: 294  ALRLLSKFNIDGQELVLNVNQATREYLERYVEKKTENLKNLKENQAPGA----------- 342

Query: 558  XXXXXXXXXXXXXXXXXXXXXXXKDAD---QKDEDITKFGLVTDEDKEADRAALEKLNSM 388
                                   KD D   +++ D   FG+VTDEDKE D+ ALEKL SM
Sbjct: 343  --AKEDGTAEKSEPPKIIGEDSNKDGDKVNKENNDPANFGIVTDEDKEGDKEALEKLTSM 400

Query: 387  IEERLKTHXXXXXXXXXLVANDGSGTLNTEDKAGLREGDSDVDMVKNDAAEDKTTDDIAS 208
            IEERLKT+              GSGT N+E  A  R+GDSD D  +   AEDK  D+  S
Sbjct: 401  IEERLKTNPLPPPPPQTPA--HGSGT-NSEFPAKSRDGDSDADTTRQ--AEDKNDDETIS 455

Query: 207  NKTP-NEHDKPDT 172
            +  P  E D+P T
Sbjct: 456  DHIPATEQDRPGT 468


>ref|XP_003517728.1| PREDICTED: uncharacterized protein LOC100809428 [Glycine max]
          Length = 927

 Score =  229 bits (583), Expect = 1e-57
 Identities = 135/310 (43%), Positives = 177/310 (57%), Gaps = 4/310 (1%)
 Frame = -2

Query: 1089 AGIPRYPGVY-PMVRPIYPPRPMGIVGINPALAXXXXXXXXXXXXXXXXXXXXXP--SVT 919
            AGIPRYP  Y  MVRP++P RP G V I P ++                        SVT
Sbjct: 148  AGIPRYPPPYGTMVRPVFPARPPGAVNI-PTISRPPVAGIPAVRPIIPPVVRPVVAPSVT 206

Query: 918  PAEKPQTTVYVGKIASTVDNDFILSVLQLCGIVKSWKRPQDPTSGTLKGYGFCEFDSAEG 739
            PAEKPQ TVY+GKIA TV+N+F+LS+LQLCG +K+WKRPQD ++GT   +GF EF+SAEG
Sbjct: 207  PAEKPQNTVYIGKIAPTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEG 266

Query: 738  ILRAIRLLSKLNIDGQELMLNFNSATKEYLERYVEKKRENMKKSEAVGTXXXXXXXXXXX 559
            +LRA+RLL+KLNIDGQEL +N N A KE LE YV+ K EN+K  E               
Sbjct: 267  VLRALRLLTKLNIDGQELKVNVNQAMKEILELYVKTKTENLKNKET------QEVGEKNE 320

Query: 558  XXXXXXXXXXXXXXXXXXXXXXXKDADQKDEDITKFGLVTDEDKEADRAALEKLNSMIEE 379
                                   + ++++  D+  FG+VTDED+EAD  ALEK+  MIEE
Sbjct: 321  GEQPSNANEDAKVDTEPSNKEASESSNKESHDVANFGIVTDEDREADCEALEKITKMIEE 380

Query: 378  RLKTHXXXXXXXXXLVANDGSGTLNTEDKAGLREGDSDVDMVKNDAAEDKTTDDIAS-NK 202
            RLKT              DGS  L +E     R+GDS VD  KN++AE+K   +  + NK
Sbjct: 381  RLKTRPLPTPPAQP--TGDGSVNLTSEQPVKARDGDSVVDTEKNESAENKNEKETNNDNK 438

Query: 201  TPNEHDKPDT 172
              +EH++ ++
Sbjct: 439  PTSEHERTES 448


>ref|XP_003519679.1| PREDICTED: uncharacterized protein LOC100803051 [Glycine max]
          Length = 765

 Score =  217 bits (553), Expect = 4e-54
 Identities = 126/298 (42%), Positives = 171/298 (57%), Gaps = 3/298 (1%)
 Frame = -2

Query: 1056 MVRPIYPPRPMGIVGINPALAXXXXXXXXXXXXXXXXXXXXXP--SVTPAEKPQTTVYVG 883
            MVRP++P RP G V I P ++                        SVTPAEKPQ TVY+G
Sbjct: 1    MVRPVFPARPPGAVNI-PTISRPPVAGIPAVRPIIPPVVRPVVAPSVTPAEKPQNTVYIG 59

Query: 882  KIASTVDNDFILSVLQLCGIVKSWKRPQDPTSGTLKGYGFCEFDSAEGILRAIRLLSKLN 703
            KIA TV+N+F+LS+LQLCG +K+WKRPQD ++GT   +GF EF+SAEG+LRA+RLL+KLN
Sbjct: 60   KIAPTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEGVLRALRLLTKLN 119

Query: 702  IDGQELMLNFNSATKEYLERYVEKKRENMKKSEAVGTXXXXXXXXXXXXXXXXXXXXXXX 523
            IDGQEL +N N A KE LERY + K EN+K  +                           
Sbjct: 120  IDGQELKVNVNQAMKENLERYDKTKTENLKNKKT-----QAGVGEKNEGEQPSNANKDAK 174

Query: 522  XXXXXXXXXXXKDADQKDEDITKFGLVTDEDKEADRAALEKLNSMIEERLKTHXXXXXXX 343
                       + ++++  D+  FG+VTDED+EADR ALEK++ MIEERLK         
Sbjct: 175  ADTEPSNKEVLESSNKESHDVANFGIVTDEDREADREALEKISKMIEERLKIR--PLPAP 232

Query: 342  XXLVANDGSGTLNTEDKAGLREGDSDVDMVKNDAAEDKTTDDIAS-NKTPNEHDKPDT 172
               +  DGS  L +E     R+GDS VD  KN++AE+K   +  + NK  +EH++ ++
Sbjct: 233  SAQLTGDGSVNLTSEQPVKARDGDSVVDTEKNESAENKNEKETNNDNKPTSEHERTES 290


>ref|XP_003574484.1| PREDICTED: uncharacterized protein LOC100842258 [Brachypodium
            distachyon]
          Length = 904

 Score =  216 bits (551), Expect = 7e-54
 Identities = 138/310 (44%), Positives = 171/310 (55%), Gaps = 6/310 (1%)
 Frame = -2

Query: 1086 GIPRYPGVYPMVRPIYPPRPMGIVGINPALAXXXXXXXXXXXXXXXXXXXXXP-SVTPAE 910
            G+ RYPG Y M+RP +PPRPM  VG+ P                          +VT A+
Sbjct: 138  GMHRYPGPYTMMRPGFPPRPMPPVGVVPIQRPAIPLGIRGAPPMVAPPVRPPAPAVTLAD 197

Query: 909  KPQTTVYVGKIASTVDNDFILSVLQLCGIVKSWKRPQDPTSGTLKGYGFCEFDSAEGILR 730
            KP T VYVGKIA TVDNDF+ S+L LCG VKSWKR Q+P++G   G+GFCEF+SAEGILR
Sbjct: 198  KPPTAVYVGKIAPTVDNDFLRSLLLLCGPVKSWKRTQNPSNGKPVGFGFCEFESAEGILR 257

Query: 729  AIRLLSKLNIDGQELMLNFNSATKEYLERYVEKKR---ENMKKSEAVGTXXXXXXXXXXX 559
            A RLL+KLNIDGQEL++N N ATKEYL+R+VE+K+   EN K+ E  G            
Sbjct: 258  ATRLLNKLNIDGQELVVNINDATKEYLKRHVEQKKKMLENTKQKEEGG------------ 305

Query: 558  XXXXXXXXXXXXXXXXXXXXXXXKDADQKD--EDITKFGLVTDEDKEADRAALEKLNSMI 385
                                   +DA  KD  E   KFG+VTD+D EAD+ A EK+NSMI
Sbjct: 306  GDGTSSVADNESSKLIPDKTEETEDAGDKDNEESTKKFGIVTDDDSEADKEAAEKINSMI 365

Query: 384  EERLKTHXXXXXXXXXLVANDGSGTLNTEDKAGLREGDSDVDMVKNDAAEDKTTDDIASN 205
            EE LKT           V      +   +D      G+S VDM K D +EDK  DDI   
Sbjct: 366  EEWLKTRPPPPPPPPPPVLPPADISFKHKD------GESGVDMTKTD-SEDKNGDDI-DK 417

Query: 204  KTPNEHDKPD 175
            +  NE +K +
Sbjct: 418  RAVNETEKTE 427


>dbj|BAC98582.1| putative RNA-binding region RNP-1 and Splicing factor PWI family
            member protein [Oryza sativa Japonica Group]
          Length = 919

 Score =  206 bits (525), Expect = 7e-51
 Identities = 131/311 (42%), Positives = 174/311 (55%), Gaps = 7/311 (2%)
 Frame = -2

Query: 1086 GIPRYPGVYPMVRPIYPPRPMGIVGINPALAXXXXXXXXXXXXXXXXXXXXXP-SVTPAE 910
            G+PRYPG YPM+RP +PPRPM  VG+ P                          +VTP +
Sbjct: 153  GMPRYPGPYPMMRPGFPPRPMPPVGVMPLQRPPIIPGIRGAPPVVPPTARPPTPAVTPPD 212

Query: 909  KPQTTVYVGKIASTVDNDFILSVLQLCGIVKSWKRPQDPTSGTLKGYGFCEFDSAEGILR 730
            KP T VYVGKIA TVDN+F+LS+L+LCG VKSWKR Q+P+SG    +GFCEF+SAEGILR
Sbjct: 213  KPPTAVYVGKIAPTVDNEFLLSLLRLCGPVKSWKRTQNPSSGKPVSFGFCEFESAEGILR 272

Query: 729  AIRLLSKLNIDGQELMLNFNSATKEYLERYVEKKRENMKKSEAVGTXXXXXXXXXXXXXX 550
            A RLL+KL+IDGQEL++N N ATKEYL+++VE+K++  +K++ +                
Sbjct: 273  ATRLLNKLSIDGQELVVNINDATKEYLKKHVEEKKKAQEKTKEM--------EDGGGSGT 324

Query: 549  XXXXXXXXXXXXXXXXXXXXKDADQK--DEDITKFGLVTDEDKEADRAALEKLNSMIEER 376
                                 DA  K  +E+  KFG+VT+ED +AD+   EK++SMIEE 
Sbjct: 325  TAVTGNELSKPVSDETETGTGDAGDKGNEENPKKFGIVTEEDSKADKDVAEKISSMIEEW 384

Query: 375  LKTHXXXXXXXXXLVANDGSGTLNTEDKAGLREGDSDVDMVKNDAAEDKT---TDDIASN 205
            LKT            A+  S   N         G+  VD+ KND +EDK+   +D  A N
Sbjct: 385  LKTRPPPPPPPVEQSADISSKHKN---------GEYSVDVTKND-SEDKSGTGSDKRAVN 434

Query: 204  KTPN-EHDKPD 175
            +T   E   PD
Sbjct: 435  ETERIETGSPD 445


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