BLASTX nr result

ID: Bupleurum21_contig00003558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003558
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...   151   8e-53
emb|CBI37573.3| unnamed protein product [Vitis vinifera]              151   8e-53
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...   146   2e-52
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...   145   2e-50
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-48

>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score =  151 bits (382), Expect(2) = 8e-53
 Identities = 70/99 (70%), Positives = 87/99 (87%)
 Frame = -3

Query: 624 IDGKVRIWGVAEKRVVDWADVRDVITAVCHHPNGKRFAVGSLSGTCRFYEASDNDLRLTA 445
           IDGKVRIWGV+E+RVVDWADVRDVITA+C+ P+GK F VGS++GTC FY AS N L+L A
Sbjct: 379 IDGKVRIWGVSERRVVDWADVRDVITAICYQPDGKGFIVGSVTGTCCFYNASGNHLQLDA 438

Query: 444 EFLVHGKKRFSGNRITGIQFTEEDSQKVMVTSEDSKIRI 328
           +   HG+K+ SGN+ITGIQF++E+SQKVM+TSEDSK+RI
Sbjct: 439 KVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRI 477



 Score = 81.6 bits (200), Expect(2) = 8e-53
 Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = -1

Query: 242 DIIHKYRGLSKSGSQMSASFTSTGRHIISVGEDSHIYVWNYDD-APVPSKHPKSV 81
           D+++KY+GL KSGSQMSASFTSTGRHI+SVGEDS +YVWNYD      SK  KSV
Sbjct: 482 DVVYKYKGLRKSGSQMSASFTSTGRHIVSVGEDSRVYVWNYDGFCSQSSKQMKSV 536


>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  151 bits (382), Expect(2) = 8e-53
 Identities = 70/99 (70%), Positives = 87/99 (87%)
 Frame = -3

Query: 624 IDGKVRIWGVAEKRVVDWADVRDVITAVCHHPNGKRFAVGSLSGTCRFYEASDNDLRLTA 445
           IDGKVRIWGV+E+RVVDWADVRDVITA+C+ P+GK F VGS++GTC FY AS N L+L A
Sbjct: 373 IDGKVRIWGVSERRVVDWADVRDVITAICYQPDGKGFIVGSVTGTCCFYNASGNHLQLDA 432

Query: 444 EFLVHGKKRFSGNRITGIQFTEEDSQKVMVTSEDSKIRI 328
           +   HG+K+ SGN+ITGIQF++E+SQKVM+TSEDSK+RI
Sbjct: 433 KVNFHGRKKTSGNKITGIQFSQEESQKVMITSEDSKLRI 471



 Score = 81.6 bits (200), Expect(2) = 8e-53
 Identities = 39/55 (70%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = -1

Query: 242 DIIHKYRGLSKSGSQMSASFTSTGRHIISVGEDSHIYVWNYDD-APVPSKHPKSV 81
           D+++KY+GL KSGSQMSASFTSTGRHI+SVGEDS +YVWNYD      SK  KSV
Sbjct: 476 DVVYKYKGLRKSGSQMSASFTSTGRHIVSVGEDSRVYVWNYDGFCSQSSKQMKSV 530


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score =  146 bits (368), Expect(2) = 2e-52
 Identities = 67/99 (67%), Positives = 83/99 (83%)
 Frame = -3

Query: 624 IDGKVRIWGVAEKRVVDWADVRDVITAVCHHPNGKRFAVGSLSGTCRFYEASDNDLRLTA 445
           IDGKVRIWGV E+RVVDW D  DV +A+C+ P+GK F VGS++GTCRFYEAS NDL+L A
Sbjct: 360 IDGKVRIWGVCEQRVVDWVDAHDVTSAICYQPDGKGFVVGSITGTCRFYEASGNDLQLGA 419

Query: 444 EFLVHGKKRFSGNRITGIQFTEEDSQKVMVTSEDSKIRI 328
           E  V G+KR +GNRITGIQF++E  Q+VM++SEDSK+RI
Sbjct: 420 EIHVQGRKRTAGNRITGIQFSQERPQRVMISSEDSKLRI 458



 Score = 85.9 bits (211), Expect(2) = 2e-52
 Identities = 47/85 (55%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
 Frame = -1

Query: 242 DIIHKYRGLSKSGSQMSASFTSTGRHIISVGEDSHIYVWNYDDAPVP-SKHPKSVH---- 78
           DI+HKY+GL KSGSQMSASFTS G+HIISVGED  +YVW+YD+   P SKH KSV     
Sbjct: 463 DIVHKYKGLPKSGSQMSASFTSGGKHIISVGEDCRVYVWDYDELCTPSSKHKKSVRSCEH 522

Query: 77  -YDQGIELQVGGDCCSGYYDILRDV 6
            + +G+ + V     SG    L+DV
Sbjct: 523 FFSEGVSIAVP---WSGMRKELKDV 544


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score =  145 bits (367), Expect(2) = 2e-50
 Identities = 68/100 (68%), Positives = 85/100 (85%)
 Frame = -3

Query: 624 IDGKVRIWGVAEKRVVDWADVRDVITAVCHHPNGKRFAVGSLSGTCRFYEASDNDLRLTA 445
           IDGK+RIWGV ++RVVDWAD+RDVITAV + P+GK FAVGS++GTCRFYE S + L L+A
Sbjct: 369 IDGKIRIWGVKKQRVVDWADIRDVITAVSYRPDGKGFAVGSITGTCRFYETSGDYLHLSA 428

Query: 444 EFLVHGKKRFSGNRITGIQFTEEDSQKVMVTSEDSKIRIF 325
           +  V G+K+ SG RITGIQF  E+SQ+VM+TSEDSK+RIF
Sbjct: 429 QINVQGRKKASGKRITGIQFFRENSQRVMITSEDSKVRIF 468



 Score = 79.3 bits (194), Expect(2) = 2e-50
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = -1

Query: 242 DIIHKYRGLSKSGSQMSASFTSTGRHIISVGEDSHIYVWNYDDAPVP-SKHPKS 84
           +IIHKY+GL KSGSQMSASFT  G+HI+SVGEDS +Y+WNYD   +P SK  KS
Sbjct: 472 EIIHKYKGLPKSGSQMSASFTKNGKHIVSVGEDSRVYMWNYDSLFLPSSKEAKS 525


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  139 bits (349), Expect(2) = 2e-48
 Identities = 63/100 (63%), Positives = 81/100 (81%)
 Frame = -3

Query: 624 IDGKVRIWGVAEKRVVDWADVRDVITAVCHHPNGKRFAVGSLSGTCRFYEASDNDLRLTA 445
           IDGKVRIWGV+EKRVV W DVRDVI+A+ + P+G+ F VG++ GTCRFYE S  DL+L A
Sbjct: 363 IDGKVRIWGVSEKRVVHWTDVRDVISAISYQPDGRGFVVGTIKGTCRFYEVSGTDLQLEA 422

Query: 444 EFLVHGKKRFSGNRITGIQFTEEDSQKVMVTSEDSKIRIF 325
           E  + G++R SGNRIT IQF++E   +VM+TSEDSK+R+F
Sbjct: 423 EVHIQGRRRTSGNRITSIQFSQEICPRVMITSEDSKVRVF 462



 Score = 79.3 bits (194), Expect(2) = 2e-48
 Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
 Frame = -1

Query: 242 DIIHKYRGLSKSGSQMSASFTSTGRHIISVGEDSHIYVWNYDDAPVP-SKHPKSV----- 81
           DI++K++GL KSGSQMSASFTS GRHIISVGED  +YVWNYD      SKH KSV     
Sbjct: 466 DIVNKFKGLPKSGSQMSASFTSNGRHIISVGEDCRVYVWNYDGLCTSWSKHIKSVKSCEF 525

Query: 80  HYDQGIELQV 51
            + +G+ + V
Sbjct: 526 FFSEGVSVAV 535


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