BLASTX nr result

ID: Bupleurum21_contig00003547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003547
         (2592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera]   605   e-170
ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vit...   598   e-168
ref|XP_002516329.1| conserved hypothetical protein [Ricinus comm...   578   e-162
ref|XP_002309932.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161
ref|XP_004146388.1| PREDICTED: F-box protein At5g39450-like [Cuc...   573   e-161

>emb|CAN77670.1| hypothetical protein VITISV_024978 [Vitis vinifera]
          Length = 641

 Score =  605 bits (1559), Expect = e-170
 Identities = 303/522 (58%), Positives = 365/522 (69%), Gaps = 8/522 (1%)
 Frame = -2

Query: 2060 EPCEXXXXXXXXXXXXXIVAQSLTPKDVXXXXXXXXXXXXXXXNDKVWFTQCEMLRAIPS 1881
            +PC              +V++SL+P+D+               ++KVW TQCEM+  +  
Sbjct: 4    DPCGSSLLLALPDDLFAMVSRSLSPRDLCNLSLGCRSLSTLVASEKVWLTQCEMVGVVSY 63

Query: 1880 RDLDEWRKGVLSYMVLCKFLVGVKSLFGIWVHQNPELGNVVYVMPGFISVVGCRIIPQEL 1701
             DL EWRKG+ SY  LC+FL+ VK L GIWVHQNPELGNVVYVMPGF+SVVGCRIIPQEL
Sbjct: 64   GDLIEWRKGISSYKALCRFLISVKPLLGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQEL 123

Query: 1700 GPLGIEDGPTLWAPVFEILCDIDGSPLFFLHGRDKNDDFIYPGCVKGVDKACNMLLLEVV 1521
            GPLGIE+GP LWAPVFEI+ D DGS  FFLHGR++ +D  YPG VKG++K CN+LLLEV 
Sbjct: 124  GPLGIEEGPILWAPVFEIIGDFDGSTAFFLHGRERENDHFYPGSVKGIEKNCNVLLLEVE 183

Query: 1520 PREQXXXXXXXXKEL--------SARVCHSGSMNEKSQRVLGQNKQNVPFNRLAFGDRRK 1365
            PREQ                     +VC S S   +SQR++ Q+   VPF+RLAFGDRR+
Sbjct: 184  PREQTSGGKLVHARSFIDHSDKEQRKVCRSDSGLSRSQRLVEQSGPMVPFSRLAFGDRRR 243

Query: 1364 LLETVTSQVRIKVPDLASGPLFPRLSSDDKNLQQDVVHLHKRRSLLMQMYKLRRDCSEHN 1185
            LLE VT+QVR+  P  A GPLFP   +D++N ++D++ L +RRS+LMQ YKL     +  
Sbjct: 244  LLEIVTNQVRLTEPSSAKGPLFPHSRNDEENFRKDMMLLFERRSILMQKYKLGGGNIDLK 303

Query: 1184 GGPQLPADSTQLELSEIRKALENSTGLRTSSGEDDCRTQSTKRKNLAGYVKDGLKQILGK 1005
              P+LP+D T LE+SEIRK+L++S+  R S   DD  TQ  KRK + GY +DG KQILGK
Sbjct: 304  AAPELPSDPTLLEVSEIRKSLDHSSAFRGSVSGDDGCTQVAKRKTIGGYFRDGFKQILGK 363

Query: 1004 SNLTIYGRERVRNSTSSSESKHAQLHNFLSSGDTIGLALHALNGKLSCYRAWPNMHDSRF 825
            S      R   +N +SSSE+KH QLH+FL SGDTIGL LHA N KLS YRAWPNMHDSRF
Sbjct: 364  SGSMNGSRPSSKNGSSSSENKHVQLHDFLKSGDTIGLTLHASNVKLSSYRAWPNMHDSRF 423

Query: 824  ALYKLPMREPKPSQEYGGLWGGTFGWPPGMPSEDKPGKALYFLFLSYEESQGQRLLIATK 645
            ALYKLPMR     QEY GLWGGTFGWPPG PSEDKPGKAL+FL LSYEE   QR LIATK
Sbjct: 424  ALYKLPMRVSTAGQEYAGLWGGTFGWPPGRPSEDKPGKALFFLLLSYEEIDEQRHLIATK 483

Query: 644  ILEGTHYVLHPNGSAMFIVNLDEPSSEPFPWAGEGDLSPLDI 519
            ILEGTHYVLHPNGSAMFIV ++EPS +PFPW  + D  P+ +
Sbjct: 484  ILEGTHYVLHPNGSAMFIVKINEPSJDPFPWETDADSLPVAV 525



 Score = 95.5 bits (236), Expect = 6e-17
 Identities = 45/59 (76%), Positives = 53/59 (89%)
 Frame = -1

Query: 366 AFVWKESRTVLTMQRLNLQELLMKGERVPALPPTANFAYLTKSYSNVFAGFSSTSNGLS 190
           AF+WKESR +LT+QRLNLQ LL KGERVPALPP ANF+YLTKSYSNVFAG ++T+N L+
Sbjct: 559 AFMWKESRAILTLQRLNLQXLLKKGERVPALPPIANFSYLTKSYSNVFAGCANTTNCLA 617


>ref|XP_002275503.1| PREDICTED: F-box protein At5g39450-like [Vitis vinifera]
          Length = 601

 Score =  598 bits (1543), Expect = e-168
 Identities = 300/514 (58%), Positives = 361/514 (70%)
 Frame = -2

Query: 2060 EPCEXXXXXXXXXXXXXIVAQSLTPKDVXXXXXXXXXXXXXXXNDKVWFTQCEMLRAIPS 1881
            +PC              +V++SL+P+D+               ++KVW TQCEM+  +  
Sbjct: 4    DPCGSSLLLALPDDLFAMVSRSLSPRDLCNLSLGCRSLSTLVASEKVWLTQCEMVGVVSY 63

Query: 1880 RDLDEWRKGVLSYMVLCKFLVGVKSLFGIWVHQNPELGNVVYVMPGFISVVGCRIIPQEL 1701
             DL EWRKG+ SY  LC+FL+ VK L GIWVHQNPELGNVVYVMPGF+SVVGCRIIPQEL
Sbjct: 64   GDLIEWRKGISSYKALCRFLISVKPLLGIWVHQNPELGNVVYVMPGFVSVVGCRIIPQEL 123

Query: 1700 GPLGIEDGPTLWAPVFEILCDIDGSPLFFLHGRDKNDDFIYPGCVKGVDKACNMLLLEVV 1521
            GPLGIE+GP LWAPVFEI+ D DGS  FFLHGR++ +D  YPG VKG++K CN+LLLEV 
Sbjct: 124  GPLGIEEGPILWAPVFEIIGDFDGSTAFFLHGRERENDHFYPGSVKGIEKNCNVLLLEVE 183

Query: 1520 PREQXXXXXXXXKELSARVCHSGSMNEKSQRVLGQNKQNVPFNRLAFGDRRKLLETVTSQ 1341
            PREQ                   S   +SQR++ Q+   VPF+RLAFGDRR+LLE VT+Q
Sbjct: 184  PREQTS---------------GDSGLSRSQRLVEQSGPMVPFSRLAFGDRRRLLEIVTNQ 228

Query: 1340 VRIKVPDLASGPLFPRLSSDDKNLQQDVVHLHKRRSLLMQMYKLRRDCSEHNGGPQLPAD 1161
            VR+  P  A GPLFP   +D++N ++D++ L +RRS+LMQ YKL     +    P+LP+D
Sbjct: 229  VRLTEPSSAKGPLFPHSRNDEENFRKDMMLLFERRSILMQKYKLGGGNIDLKAAPELPSD 288

Query: 1160 STQLELSEIRKALENSTGLRTSSGEDDCRTQSTKRKNLAGYVKDGLKQILGKSNLTIYGR 981
             T LE+SEIRK+L++S+  R S   DD  TQ  KRK + GY +DG KQILGKS      R
Sbjct: 289  PTLLEVSEIRKSLDHSSAFRGSVSGDDGCTQVAKRKTIGGYFRDGFKQILGKSGSMNGSR 348

Query: 980  ERVRNSTSSSESKHAQLHNFLSSGDTIGLALHALNGKLSCYRAWPNMHDSRFALYKLPMR 801
               +N +SSSE+KH QLH+FL SGDTIGL LHA N KLS YRAWPNMHDSRFALYKLPMR
Sbjct: 349  PSSKNGSSSSENKHVQLHDFLKSGDTIGLTLHASNVKLSSYRAWPNMHDSRFALYKLPMR 408

Query: 800  EPKPSQEYGGLWGGTFGWPPGMPSEDKPGKALYFLFLSYEESQGQRLLIATKILEGTHYV 621
                 QEY GLWGGTFGWPPG PSEDKPGKAL+FL LSYEE   QR LIATKILEGTHYV
Sbjct: 409  VSTAGQEYAGLWGGTFGWPPGRPSEDKPGKALFFLLLSYEEIDEQRHLIATKILEGTHYV 468

Query: 620  LHPNGSAMFIVNLDEPSSEPFPWAGEGDLSPLDI 519
            LHPNGSAMFIV ++EPS +PFPW  + D  P+ +
Sbjct: 469  LHPNGSAMFIVKINEPSIDPFPWETDADSLPVAV 502



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = -1

Query: 366 AFVWKESRTVLTMQRLNLQELLMKGERVPALPPTANFAYLTKSYSNVFAGFSSTSNGLS 190
           AF+WKESR +LT+QRLNLQELL KGERVPALPP ANF+YLTKSYSNVFAG ++T+N L+
Sbjct: 536 AFMWKESRAILTLQRLNLQELLKKGERVPALPPIANFSYLTKSYSNVFAGCANTTNCLA 594


>ref|XP_002516329.1| conserved hypothetical protein [Ricinus communis]
            gi|223544559|gb|EEF46076.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 636

 Score =  578 bits (1489), Expect = e-162
 Identities = 292/505 (57%), Positives = 361/505 (71%), Gaps = 9/505 (1%)
 Frame = -2

Query: 2006 VAQSLTPKDVXXXXXXXXXXXXXXXNDKVWFTQCEMLRAIPSRDLDEWRKGVLSYMVLCK 1827
            V+++L+P+D+               ++KVW TQC+M+  +P RDL EWRKGV SY  LC+
Sbjct: 21   VSRALSPRDICNLSLCCRSLCVLVASEKVWLTQCDMVGIVPHRDLIEWRKGVSSYKALCR 80

Query: 1826 FLVGVKSLFGIWVHQNPELGNVVYVMPGFISVVGCRIIPQELGPLGIEDGPTLWAPVFEI 1647
            FLV VK L GIWVHQNPELGNVVYV+PGF+SVVGCRIIPQELGPLGIEDGP LWAPVFEI
Sbjct: 81   FLVSVKPLMGIWVHQNPELGNVVYVLPGFVSVVGCRIIPQELGPLGIEDGPILWAPVFEI 140

Query: 1646 LCDIDGSPLFFLHGRDKNDDFIYPGCVKGVDKACNMLLLEVVPREQXXXXXXXXK----- 1482
            L D DGS LF LHGR+K +D+IYPG VKGV++ CN+LLLEV   +Q              
Sbjct: 141  LGDHDGSVLFLLHGREKGNDYIYPGSVKGVEENCNILLLEVEAGQQKSGKLLLHSKSLAY 200

Query: 1481 ----ELSARVCHSGSMNEKSQRVLGQNKQNVPFNRLAFGDRRKLLETVTSQVRIKVPDLA 1314
                E S ++  S     +SQ +LGQ    VPF+RLAF DRRKL+E VT  +   VPD A
Sbjct: 201  NSDKEQSRKISRSNIGLSRSQSMLGQCDSKVPFSRLAFSDRRKLIEVVTGHIHQSVPDSA 260

Query: 1313 SGPLFPRLSSDDKNLQQDVVHLHKRRSLLMQMYKLRRDCSEHNGGPQLPADSTQLELSEI 1134
            +GPLFP    DD N Q+D+  L +RR+LL+QMY L +   +    P+LP+DST+L+LSE 
Sbjct: 261  NGPLFPGFC-DDNNSQKDISLLFERRTLLLQMYNLGQSHFDWKEAPELPSDSTKLQLSET 319

Query: 1133 RKALENSTGLRTSSGEDDCRTQSTKRKNLAGYVKDGLKQILGKSNLTIYGRERVRNSTSS 954
            +++L++S+G   SS   D   +   +K L+GY +  LKQILGKS  +I G   +  ++SS
Sbjct: 320  KRSLDHSSGYY-SSLNGDSEAKVIMKKTLSGYFRSSLKQILGKSP-SINGSRIISKNSSS 377

Query: 953  SESKHAQLHNFLSSGDTIGLALHALNGKLSCYRAWPNMHDSRFALYKLPMREPKPSQEYG 774
            SE+KHAQL  FL S DTIGL LHA   +LS YRAWPNMHDSRFALYKLP+R P+  QE+ 
Sbjct: 378  SENKHAQLREFLRSSDTIGLTLHASTTRLSSYRAWPNMHDSRFALYKLPLRVPRADQEFA 437

Query: 773  GLWGGTFGWPPGMPSEDKPGKALYFLFLSYEESQGQRLLIATKILEGTHYVLHPNGSAMF 594
            GLWGGTFGWPPG P+EDKPGKAL+FL +SYEES GQR LIATKILEGTHYVLHPNGSAMF
Sbjct: 438  GLWGGTFGWPPGKPTEDKPGKALFFLLISYEESGGQRQLIATKILEGTHYVLHPNGSAMF 497

Query: 593  IVNLDEPSSEPFPWAGEGDLSPLDI 519
            IVN+DEPS + FPW  + + +P+ +
Sbjct: 498  IVNIDEPSQDLFPWDVDANSNPVSV 522



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = -1

Query: 366 AFVWKESRTVLTMQRLNLQELLMKGERVPALPPTANFAYLTKSYSNVFAGFSSTSNGLS 190
           AF+WKESR VLT+Q+LNLQELL KGERVPALPP ANF+YLTKSYSNVFA FS+ S  LS
Sbjct: 556 AFIWKESRAVLTLQKLNLQELLKKGERVPALPPIANFSYLTKSYSNVFASFSNVSTCLS 614


>ref|XP_002309932.1| predicted protein [Populus trichocarpa] gi|222852835|gb|EEE90382.1|
            predicted protein [Populus trichocarpa]
          Length = 614

 Score =  574 bits (1479), Expect = e-161
 Identities = 288/503 (57%), Positives = 365/503 (72%), Gaps = 7/503 (1%)
 Frame = -2

Query: 2006 VAQSLTPKDVXXXXXXXXXXXXXXXNDKVWFTQCEMLRAIPSRDLDEWRKGVLSYMVLCK 1827
            +++SL+P+D+               ++KVW TQC+M+  I  +D+ EWRKGV SY  LC+
Sbjct: 21   ISRSLSPRDMCTLSLCCRSLYDLVASEKVWRTQCDMVGIISHQDVMEWRKGVSSYRALCR 80

Query: 1826 FLVGVKSLFGIWVHQNPELGNVVYVMPGFISVVGCRIIPQELGPLGIEDGPTLWAPVFEI 1647
            FLV VK L GIWVHQNPELGNVVYVMPGF+SVVGCRI+PQELGPLGIE+GP LWAPVFEI
Sbjct: 81   FLVSVKPLIGIWVHQNPELGNVVYVMPGFVSVVGCRILPQELGPLGIEEGPILWAPVFEI 140

Query: 1646 LCDIDGSPLFFLHGRDKNDDFIYPGCVKGVDKACNMLLLEVVPREQXXXXXXXXK----- 1482
            + D+DGS  FFLHG +K +D +YPG VK V + CN+LLLEV PR+Q              
Sbjct: 141  IGDLDGSTSFFLHGGEKGNDHVYPGSVKSVGRKCNVLLLEVEPRQQKGKLFPNKSFAYNS 200

Query: 1481 --ELSARVCHSGSMNEKSQRVLGQNKQNVPFNRLAFGDRRKLLETVTSQVRIKVPDLASG 1308
              EL+ ++  S +    SQR++ Q +  VPF+RL+F DRRKL+E VTSQV  KVPDL + 
Sbjct: 201  DKELARKLSRSHNGLSWSQRLIIQCEAKVPFSRLSFSDRRKLIEVVTSQVGQKVPDLENR 260

Query: 1307 PLFPRLSSDDKNLQQDVVHLHKRRSLLMQMYKLRRDCSEHNGGPQLPADSTQLELSEIRK 1128
             LFPRL +D++N Q+D+  L +RRS L+++ KL +  +     P++P+D TQL+ SEIRK
Sbjct: 261  LLFPRLRNDEENFQKDIALLFERRSFLLKICKLGQGFNWKEA-PEVPSDPTQLQWSEIRK 319

Query: 1127 ALENSTGLRTSSGEDDCRTQSTKRKNLAGYVKDGLKQILGKSNLTIYGRERVRNSTSSSE 948
            +L+ S+G   S  EDD + QS  +K L GY++  ++ ILGKS          ++S+SS E
Sbjct: 320  SLDRSSG---SLNEDDNQMQSNTKKTLGGYLRAYIRHILGKSPSVNGSHAHSKHSSSSRE 376

Query: 947  SKHAQLHNFLSSGDTIGLALHALNGKLSCYRAWPNMHDSRFALYKLPMREPKPSQEYGGL 768
            SKHAQLH FL SGDTIGL LHA   +LS YRAWPN+HD++FALYKLPMR P+  QEY GL
Sbjct: 377  SKHAQLHEFLRSGDTIGLTLHASKMRLSSYRAWPNIHDNQFALYKLPMRVPRADQEYAGL 436

Query: 767  WGGTFGWPPGMPSEDKPGKALYFLFLSYEESQGQRLLIATKILEGTHYVLHPNGSAMFIV 588
            WGGTFGWPPG P+EDKPGKAL+FL ++YEES+GQR LIATKILEGTHYVLHPNGSAMF+V
Sbjct: 437  WGGTFGWPPGKPTEDKPGKALFFLLITYEESEGQRNLIATKILEGTHYVLHPNGSAMFVV 496

Query: 587  NLDEPSSEPFPWAGEGDLSPLDI 519
            N+DEPS +PFPW  + +  PL I
Sbjct: 497  NIDEPSQDPFPWDVDANSFPLTI 519



 Score = 97.8 bits (242), Expect = 1e-17
 Identities = 48/58 (82%), Positives = 51/58 (87%)
 Frame = -1

Query: 366 AFVWKESRTVLTMQRLNLQELLMKGERVPALPPTANFAYLTKSYSNVFAGFSSTSNGL 193
           AFVWKESR VL MQRLNLQELL KGERVPALPP+ NF+YLTKSYSNVFAGFS+ S  L
Sbjct: 553 AFVWKESRAVLNMQRLNLQELLKKGERVPALPPSDNFSYLTKSYSNVFAGFSTASTCL 610


>ref|XP_004146388.1| PREDICTED: F-box protein At5g39450-like [Cucumis sativus]
          Length = 623

 Score =  573 bits (1478), Expect = e-161
 Identities = 293/526 (55%), Positives = 358/526 (68%), Gaps = 9/526 (1%)
 Frame = -2

Query: 2069 MLCEPCEXXXXXXXXXXXXXIVAQSLTPKDVXXXXXXXXXXXXXXXNDKVWFTQCEMLRA 1890
            ML E C              IV++SLTP+D+               ++K+W TQCEM+  
Sbjct: 1    MLPEVCGLSLFLSLPDDVFSIVSRSLTPRDLCNLSLCCRSLHASTASEKIWLTQCEMVGV 60

Query: 1889 IPSRDLDEWRKGVLSYMVLCKFLVGVKSLFGIWVHQNPELGNVVYVMPGFISVVGCRIIP 1710
            + ++DL +WR GV SY  LC+FL  ++ L GIWVHQNPELGNVVYVMPGF+SVVGCRIIP
Sbjct: 61   LAAKDLIDWRTGVASYKALCRFLTRIEPLMGIWVHQNPELGNVVYVMPGFVSVVGCRIIP 120

Query: 1709 QELGPLGIEDGPTLWAPVFEILCDIDGSPLFFLHGRDKNDDFIYPGCVKGVDKACNMLLL 1530
            QELGPLGIE+GP LWAPVFEIL D DG+  F LHGR+K  D+ YPG VK VDK+CN+LLL
Sbjct: 121  QELGPLGIEEGPILWAPVFEILGDADGTASFCLHGREKGIDYFYPGLVKAVDKSCNVLLL 180

Query: 1529 EVVPRE---------QXXXXXXXXKELSARVCHSGSMNEKSQRVLGQNKQNVPFNRLAFG 1377
            EV  R                    + S +VC S S  ++SQ V GQ++  VPF RL F 
Sbjct: 181  EVDTRPYKNYNSTLLHSKSFVNHSDQESRKVCRSNS--DRSQCVFGQHESKVPFGRLTFS 238

Query: 1376 DRRKLLETVTSQVRIKVPDLASGPLFPRLSSDDKNLQQDVVHLHKRRSLLMQMYKLRRDC 1197
            DRRKLLETV SQVR+KVP+  +GPLFPRL  D++N ++D+V L KRRS+LMQ  K+    
Sbjct: 239  DRRKLLETVMSQVRVKVPNPVTGPLFPRLRDDEENFKKDMVALSKRRSVLMQYRKIGGSQ 298

Query: 1196 SEHNGGPQLPADSTQLELSEIRKALENSTGLRTSSGEDDCRTQSTKRKNLAGYVKDGLKQ 1017
                G  +L  +  QLELSE RK+L+ ST L  S   D+ + +  K+K +  Y    L  
Sbjct: 299  MSWKGSSELFPNPNQLELSEFRKSLDGSTDLHKSINGDNDQIRCRKKKTIGRYFTQSLNH 358

Query: 1016 ILGKSNLTIYGRERVRNSTSSSESKHAQLHNFLSSGDTIGLALHALNGKLSCYRAWPNMH 837
            +L KS L   G+   +N  SS+ +K+ QL +FL SGDTIGLALHA   KLS YR WPNMH
Sbjct: 359  VLKKSGLFNDGKGISKNGCSSTVNKYVQLEDFLKSGDTIGLALHASTMKLSSYRGWPNMH 418

Query: 836  DSRFALYKLPMREPKPSQEYGGLWGGTFGWPPGMPSEDKPGKALYFLFLSYEESQGQRLL 657
            DSRFALYKLPMR P   QEY GLWGGTFGWPPG P+EDKPGKAL+FL LSYE+SQ Q  L
Sbjct: 419  DSRFALYKLPMRAPTAEQEYAGLWGGTFGWPPGKPTEDKPGKALFFLLLSYEKSQDQLFL 478

Query: 656  IATKILEGTHYVLHPNGSAMFIVNLDEPSSEPFPWAGEGDLSPLDI 519
            IATKILEGTHYVLHPNGSAMF VN++EPS++PFPW  +GDL P+++
Sbjct: 479  IATKILEGTHYVLHPNGSAMFRVNINEPSADPFPWESDGDLLPVNV 524



 Score = 95.9 bits (237), Expect = 5e-17
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = -1

Query: 366 AFVWKESRTVLTMQRLNLQELLMKGERVPALPPTANFAYLTKSYSNVFAGFSSTSNGLS 190
           AF+WKES++VLT+QRLNLQ+LL KGER+P LPP+ NF+YLTKSYSNVFAGF +TS   S
Sbjct: 558 AFIWKESKSVLTLQRLNLQDLLKKGERIPPLPPSVNFSYLTKSYSNVFAGFPNTSTSFS 616


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