BLASTX nr result
ID: Bupleurum21_contig00003543
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00003543
(1668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf... 597 e-168
ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransf... 569 e-160
ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransf... 568 e-159
ref|XP_002521716.1| protein with unknown function [Ricinus commu... 555 e-155
ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2... 553 e-155
>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like
[Vitis vinifera] gi|296088658|emb|CBI37649.3| unnamed
protein product [Vitis vinifera]
Length = 556
Score = 597 bits (1540), Expect = e-168
Identities = 319/555 (57%), Positives = 395/555 (71%), Gaps = 13/555 (2%)
Frame = -2
Query: 1628 DGTTSFPPIEPTTFDLIVVGTGLHEXXXXXXXXXAGKSVLHLDPNAFYGSHFASLSLPDF 1449
D T S+PPIEPT FDLIVVGTGL + AGKSVLHLD N+FYGSHF+SL+L +F
Sbjct: 2 DETPSYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGKSVLHLDSNSFYGSHFSSLNLDEF 61
Query: 1448 TSFLTSHS------PTPPPILRHQNLTSIALE--TRKLYSNVEISRYK---IEDEKKFCV 1302
+SFLTS S P PP + +AL+ TR +YS+VEI+ + +E +KF +
Sbjct: 62 SSFLTSQSAVHSSHPNPPSSVAADAAEYVALDLKTRPMYSDVEITSHSSDPVEHSRKFNL 121
Query: 1301 DLAGPRVLFCADLAVDLLLKSSANQYMEFKNVEECLVWEGSKGLRNVPDSRSAIFKDKGL 1122
D++GPRVLFCAD AVDL+LKS A+QY+EFK+++ V + VPDSR+AIFKD+ L
Sbjct: 122 DVSGPRVLFCADAAVDLMLKSGASQYLEFKSIDASFVCDADGRFSTVPDSRAAIFKDRSL 181
Query: 1121 DWREKNQLMKFFKLVQKHLGXXXXXXXXXXXXXXXXXXS-PFVEFLDKMMLPPNIKSIIL 945
EKNQLM+FFKL+Q HL PFVEFL+KM LPP IKS+IL
Sbjct: 182 SLTEKNQLMRFFKLIQGHLAASDEAENDSNARISEDDLESPFVEFLNKMRLPPKIKSMIL 241
Query: 944 YAIAMADCDQDLKEVKIEVLKTKVGIKRLALYHSSVGRFPNALGALIYPIYGQGELPQAF 765
YAIAMAD DQD EV +VL TK+GI RLALYHSSVGRFPNALGALIYPIYGQGEL QAF
Sbjct: 242 YAIAMADYDQDSIEVCKDVLDTKIGIDRLALYHSSVGRFPNALGALIYPIYGQGELTQAF 301
Query: 764 CRRAAVKGCLYVLRMPVIALLLDEVSESYKGVKLSSGQELFSQKLVLDPSFIVPSGMANS 585
CRRAAVKGC+YVLRMPVIALL+++ S KGV+L+SGQ++FSQKL++DPSFIVP +A S
Sbjct: 302 CRRAAVKGCIYVLRMPVIALLMEKESGHCKGVRLASGQDIFSQKLLVDPSFIVPVPVAPS 361
Query: 584 SLDIPQDSSVIFGSKNINQKVARGICITKTPLKPDVSSCVVFFPPRSLYPEQVSTLRVLQ 405
D +SS + + QKVARGICI K+ LKPDVS+ V +PPRSLYPEQ +R +Q
Sbjct: 362 QPDCMPESSQVINLVDAKQKVARGICIMKSSLKPDVSNFVFVYPPRSLYPEQAMAIRAVQ 421
Query: 404 LASNIAVCPSGTFVFHISALCGDAIEGKKLLNAAVKALFPVP-SISPINICTEEDGNLEE 228
+ SN+ VCPSG FV ++S LC DA +GK+LL AA+K+LF +P S +P N + N+EE
Sbjct: 422 IGSNLGVCPSGMFVLYLSTLCNDATQGKELLQAAIKSLFTLPVSGNPENSSSVHSENMEE 481
Query: 227 LQPTLLWHALYIQELSTGSVGSISSMPMPDMNLNYNDAIEATEKIYQMMYPNEEFFPETI 48
++PTLLW ALY QEL GS SISS MPD NLNYN ++AT K++ MYP EEFFPET
Sbjct: 482 VKPTLLWSALYTQELVMGSFESISSTSMPDGNLNYNVLLDATVKLFHQMYPQEEFFPETT 541
Query: 47 TSDIPEDNDDIDTET 3
+ + ED+D + E+
Sbjct: 542 SPENVEDDDGLSLES 556
>ref|XP_003517135.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
[Glycine max]
Length = 553
Score = 569 bits (1467), Expect = e-160
Identities = 292/543 (53%), Positives = 373/543 (68%), Gaps = 10/543 (1%)
Frame = -2
Query: 1616 SFPPIEPTTFDLIVVGTGLHEXXXXXXXXXAGKSVLHLDPNAFYGSHFASLSLPDFTSFL 1437
S+PPI+P FDLI+VGT L E GK++LHLDPN+FYGSHFASLSL D TS+L
Sbjct: 9 SYPPIDPVNFDLIIVGTALSESVIAAAASAVGKTILHLDPNSFYGSHFASLSLHDLTSYL 68
Query: 1436 TSHSPTPPPILR-----HQNLTSIALETRKLYSNVEISRYK-----IEDEKKFCVDLAGP 1287
TS P ++ + L + L ++ E + Y E+ +KF +DL GP
Sbjct: 69 TSPHSLPSAATAAASSDSDDIVVVDLVHQPLCTDAETATYDESAFLSENSRKFNIDLGGP 128
Query: 1286 RVLFCADLAVDLLLKSSANQYMEFKNVEECLVWEGSKGLRNVPDSRSAIFKDKGLDWREK 1107
R LFCAD +DLL+KS A QY+EFK ++E V+E + GL NVPDSR AIF+DK L +EK
Sbjct: 129 RALFCADKTIDLLMKSGAAQYLEFKGIDESFVYEANAGLANVPDSRGAIFRDKKLSLKEK 188
Query: 1106 NQLMKFFKLVQKHLGXXXXXXXXXXXXXXXXXXSPFVEFLDKMMLPPNIKSIILYAIAMA 927
NQLM+FFKLVQ+HL PFV FL+KM LPP IKSI+LYAIAM
Sbjct: 189 NQLMRFFKLVQQHLDDTQEEKIPKEDLEI-----PFVSFLEKMKLPPKIKSILLYAIAML 243
Query: 926 DCDQDLKEVKIEVLKTKVGIKRLALYHSSVGRFPNALGALIYPIYGQGELPQAFCRRAAV 747
D DQD EV E+LKTK GI LA Y SSVGRFPNA GAL+YPIYG+GELPQAFCRRAAV
Sbjct: 244 DYDQDNNEVCEELLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAV 303
Query: 746 KGCLYVLRMPVIALLLDEVSESYKGVKLSSGQELFSQKLVLDPSFIVPSGMANSSLDIPQ 567
KGC+YVLRMPV++LL+D+V+ SYKGV+L+SGQ+L+S +L+LDPSF +PS ++ S D P
Sbjct: 304 KGCIYVLRMPVVSLLMDKVTGSYKGVRLASGQDLYSHQLILDPSFTIPSPLSLSLGDFPS 363
Query: 566 DSSVIFGSKNINQKVARGICITKTPLKPDVSSCVVFFPPRSLYPEQVSTLRVLQLASNIA 387
+ + ++I VARGICIT++ +KPDVSSC V +PPRSLYPEQV++++ LQ+ SN+A
Sbjct: 364 ERLQMLSQRDIKGMVARGICITRSSIKPDVSSCSVVYPPRSLYPEQVTSIKALQIGSNLA 423
Query: 386 VCPSGTFVFHISALCGDAIEGKKLLNAAVKALFPVPSISPINICTEEDGNLEELQPTLLW 207
VCP+GTF+ ++S LC DA EGKKLL AA+ AL +P + E+++P +LW
Sbjct: 424 VCPAGTFILYLSTLCNDADEGKKLLKAAMNALLTLPVSGNSESIPSVQSDSEDIKPIVLW 483
Query: 206 HALYIQELSTGSVGSISSMPMPDMNLNYNDAIEATEKIYQMMYPNEEFFPETITSDIPED 27
A YIQ+L ISS P PD NLNYN ++ATEK++ MYPNEEFFP+ + + P D
Sbjct: 484 SAFYIQKLIMSKFEFISSTPTPDGNLNYNALLDATEKLFNQMYPNEEFFPKATSPEDPTD 543
Query: 26 NDD 18
DD
Sbjct: 544 EDD 546
>ref|XP_003537683.1| PREDICTED: rab proteins geranylgeranyltransferase component A-like
[Glycine max]
Length = 551
Score = 568 bits (1464), Expect = e-159
Identities = 287/541 (53%), Positives = 377/541 (69%), Gaps = 8/541 (1%)
Frame = -2
Query: 1616 SFPPIEPTTFDLIVVGTGLHEXXXXXXXXXAGKSVLHLDPNAFYGSHFASLSLPDFTSFL 1437
S+PPI+P FDLI+VGT L E GK++LHLDPN+FYGSHFASLSL D TS+L
Sbjct: 9 SYPPIDPVNFDLIIVGTALSESVIAAAASAVGKTILHLDPNSFYGSHFASLSLHDLTSYL 68
Query: 1436 TSHSPTPPPILR---HQNLTSIALETRKLYSNVEISRYK-----IEDEKKFCVDLAGPRV 1281
+S P ++ I + L S+ EI+ Y E+ +KF +DL GP+
Sbjct: 69 SSPHSLPSAAATTTDSDDVVVIDFVQQPLCSDAEIATYDESAFLSENSRKFSIDLGGPKA 128
Query: 1280 LFCADLAVDLLLKSSANQYMEFKNVEECLVWEGSKGLRNVPDSRSAIFKDKGLDWREKNQ 1101
LFCAD +DLL+KS A QY+EFK ++E V+E + GL NVPDSR +IF+DK L +EKNQ
Sbjct: 129 LFCADKTIDLLMKSGAAQYLEFKGIDESFVYEANAGLANVPDSRGSIFRDKKLSLKEKNQ 188
Query: 1100 LMKFFKLVQKHLGXXXXXXXXXXXXXXXXXXSPFVEFLDKMMLPPNIKSIILYAIAMADC 921
LM+FFKLVQ+HL FV FL+KM LPP IKSI+LYAIAM D
Sbjct: 189 LMRFFKLVQQHLDDTQEEKIPEEDLEIA-----FVSFLEKMKLPPKIKSILLYAIAMLDY 243
Query: 920 DQDLKEVKIEVLKTKVGIKRLALYHSSVGRFPNALGALIYPIYGQGELPQAFCRRAAVKG 741
DQD EV IE+LKTK GI LALY SSVGRFPNA GAL+YPIYG+GELPQAFCRRAAVKG
Sbjct: 244 DQDNNEVCIELLKTKDGIDSLALYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKG 303
Query: 740 CLYVLRMPVIALLLDEVSESYKGVKLSSGQELFSQKLVLDPSFIVPSGMANSSLDIPQDS 561
C+YVLRM V++LL+D+V+ SYKGV+L+SGQ+L+S +L+LDPSF++PS +++S D P +
Sbjct: 304 CIYVLRMSVVSLLMDKVTGSYKGVRLASGQDLYSHQLILDPSFMIPSPLSSSPRDFPSEK 363
Query: 560 SVIFGSKNINQKVARGICITKTPLKPDVSSCVVFFPPRSLYPEQVSTLRVLQLASNIAVC 381
+ G ++I VARGICIT++ +KPDVS+C V +PPRSLYPEQ+++++ LQ+ SN+AVC
Sbjct: 364 LQMLGQRDIKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPEQLTSIKALQIGSNLAVC 423
Query: 380 PSGTFVFHISALCGDAIEGKKLLNAAVKALFPVPSISPINICTEEDGNLEELQPTLLWHA 201
P+GTF+ + S +C DA EGKKLL AA+ AL +P + E+++P +LW A
Sbjct: 424 PAGTFILYFSTMCNDADEGKKLLKAAMNALLTLPVSGNSESIPSVQSDSEDIKPIVLWSA 483
Query: 200 LYIQELSTGSVGSISSMPMPDMNLNYNDAIEATEKIYQMMYPNEEFFPETITSDIPEDND 21
YIQ+L + ISS P PD NLNY+D ++AT K++ MYP+EEFFP++ + + P D D
Sbjct: 484 FYIQKLIMCKLEFISSTPTPDGNLNYDDLLDATRKLFNQMYPDEEFFPKSTSPEDPTDED 543
Query: 20 D 18
D
Sbjct: 544 D 544
>ref|XP_002521716.1| protein with unknown function [Ricinus communis]
gi|223539107|gb|EEF40703.1| protein with unknown function
[Ricinus communis]
Length = 551
Score = 555 bits (1429), Expect = e-155
Identities = 294/550 (53%), Positives = 378/550 (68%), Gaps = 12/550 (2%)
Frame = -2
Query: 1616 SFPPIEPTTFDLIVVGTGLHEXXXXXXXXXAGKSVLHLDPNAFYGSHFASLSLPDFTSFL 1437
S+P I+PTTFDLI++GTGL E +GKSVLH+D N FYGSHF+SLS+PD TSFL
Sbjct: 6 SYPSIDPTTFDLILIGTGLSESIIAAAASASGKSVLHIDQNKFYGSHFSSLSIPDLTSFL 65
Query: 1436 TSHS-PTP---PPILRHQNLTSIALETRKLYSNVEISRYKIE----DEKKFCVDLAGPRV 1281
S+S PTP PP H + T + L T+ LYSNVEIS + E + KF +D++GPRV
Sbjct: 66 NSNSVPTPSPPPPQTPHPDFTVVNLTTQSLYSNVEISSFSNELIEQNCSKFSLDISGPRV 125
Query: 1280 LFCADLAVDLLLKSSANQYMEFKNVEECLVWEGSKGLRNVPDSRSAIFKDKGLDWREKNQ 1101
L+CAD ++DL++K+ ANQY+EFK+++ V + + L NVPDSR+AIFKDK L EKN+
Sbjct: 126 LYCADNSIDLMIKTGANQYVEFKSIDASFVGDENGKLWNVPDSRAAIFKDKSLSLMEKNR 185
Query: 1100 LMKFFKLVQKHLGXXXXXXXXXXXXXXXXXXS---PFVEFLDKMMLPPNIKSIILYAIAM 930
LM+FFKLVQ + PFV+FL+KM L IKSIILYAI M
Sbjct: 186 LMRFFKLVQSQIATNENQEQQEEEDVRISEQDLESPFVDFLNKMKLSSKIKSIILYAIVM 245
Query: 929 ADCDQD-LKEVKIEVLKTKVGIKRLALYHSSVGRFPNALGALIYPIYGQGELPQAFCRRA 753
ADCDQ+ ++LKTK GI RLALY SS+GRF NALGA IYPIYGQGELP AFCRRA
Sbjct: 246 ADCDQENTGGANKDLLKTKDGIDRLALYQSSIGRFTNALGAFIYPIYGQGELPPAFCRRA 305
Query: 752 AVKGCLYVLRMPVIALLLDEVSESYKGVKLSSGQELFSQKLVLDPSFIVPSGMANSSLDI 573
AVKGC+YVLRMPV+ALL+D+ + +YKG++L+SGQE++SQKLVLDPSF VPS S D
Sbjct: 306 AVKGCIYVLRMPVVALLMDKNNGNYKGIRLASGQEIYSQKLVLDPSFTVPS----SPSDP 361
Query: 572 PQDSSVIFGSKNINQKVARGICITKTPLKPDVSSCVVFFPPRSLYPEQVSTLRVLQLASN 393
+S +++ QKVAR ICITK LKPD S+ + +PPRSLYPEQ +++R LQ+ +
Sbjct: 362 LHESFCFLSVRDVKQKVARAICITKCSLKPDTSNFLAVYPPRSLYPEQSTSIRALQMGGS 421
Query: 392 IAVCPSGTFVFHISALCGDAIEGKKLLNAAVKALFPVPSISPINICTEEDGNLEELQPTL 213
+AVCP+ F+ ++SALC D +GKKLLN A+ AL C+ E+Q L
Sbjct: 422 LAVCPTNMFILYLSALCDDVHQGKKLLNTAMNALLSSTDSENPESCSTGQTENTEVQSML 481
Query: 212 LWHALYIQELSTGSVGSISSMPMPDMNLNYNDAIEATEKIYQMMYPNEEFFPETITSDIP 33
LW ALYIQEL+TG SISS MPD NL+YND +++ +K++Q MYPNEEFFPET + +
Sbjct: 482 LWSALYIQELTTGQFDSISSTSMPDGNLDYNDVLDSAKKLFQKMYPNEEFFPETKSPESS 541
Query: 32 EDNDDIDTET 3
E + + E+
Sbjct: 542 EHDAGVALES 551
>ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1|
predicted protein [Populus trichocarpa]
Length = 553
Score = 553 bits (1426), Expect = e-155
Identities = 299/548 (54%), Positives = 379/548 (69%), Gaps = 11/548 (2%)
Frame = -2
Query: 1613 FPPIEPTTFDLIVVGTGLHEXXXXXXXXXAGKSVLHLDPNAFYGSHFASLSLPDFTSFLT 1434
+P IEPTTFDLI VGTGL E +GK+VLHLD N FYGSH++SLS+P+ TSFL
Sbjct: 7 YPQIEPTTFDLIAVGTGLAECIVAAAASASGKTVLHLDTNPFYGSHYSSLSVPELTSFLI 66
Query: 1433 SHSPTPPPILRHQNLTSIA------LETRKLYSNVEISRYKIE----DEKKFCVDLAGPR 1284
S+S P T I L T+ +YS+VEIS + E + +KF +DL GPR
Sbjct: 67 SNSTASSPPSSTSTTTDIPDYSIVNLITQPVYSDVEISCFYPELIEENLRKFNLDLCGPR 126
Query: 1283 VLFCADLAVDLLLKSSANQYMEFKNVEECLVWEGSKGLRNVPDSRSAIFKDKGLDWREKN 1104
VLFCAD ++DL+LKS A+ Y+EFK+++ V +G+ L NVPDSR+AIFKDK L EKN
Sbjct: 127 VLFCADKSIDLMLKSGASNYVEFKSIDASFVGDGNGKLWNVPDSRAAIFKDKSLTLMEKN 186
Query: 1103 QLMKFFKLVQKHL-GXXXXXXXXXXXXXXXXXXSPFVEFLDKMMLPPNIKSIILYAIAMA 927
QLM+FFKLVQ HL PFVE+L KM LPP I+SIILYAIAMA
Sbjct: 187 QLMRFFKLVQGHLVATVGAGTSGKMKISDEDLQRPFVEYLSKMRLPPKIRSIILYAIAMA 246
Query: 926 DCDQDLKEVKIEVLKTKVGIKRLALYHSSVGRFPNALGALIYPIYGQGELPQAFCRRAAV 747
D DQD V +LKTK GI RLALY SSVGRF NA GALIYPIYGQGELPQAF RR+AV
Sbjct: 247 DYDQDDMGVCQNLLKTKDGIDRLALYQSSVGRFTNASGALIYPIYGQGELPQAFSRRSAV 306
Query: 746 KGCLYVLRMPVIALLLDEVSESYKGVKLSSGQELFSQKLVLDPSFIVPSGMANSSLDIPQ 567
KGC++VLRMPV ALL+++ S SYKGV+L+SGQ++FSQKLVLDPSF + S A+ S D+
Sbjct: 307 KGCIHVLRMPVTALLMEKDSGSYKGVRLASGQDIFSQKLVLDPSFTLASPSASPS-DLLH 365
Query: 566 DSSVIFGSKNINQKVARGICITKTPLKPDVSSCVVFFPPRSLYPEQVSTLRVLQLASNIA 387
+S ++++ KVARGICIT+ LKPD+S+ +V +PPRSLYPEQ++++R LQ++ N+A
Sbjct: 366 ESFNFLSTRDVKGKVARGICITRNSLKPDMSNLLVVYPPRSLYPEQITSIRALQISGNLA 425
Query: 386 VCPSGTFVFHISALCGDAIEGKKLLNAAVKALFPVPSISPINICTEEDGNLEELQPTLLW 207
VCP G FV ++SALC DAI+GK+LLNAA+ AL P + E +P+++W
Sbjct: 426 VCPLGMFVLYLSALCDDAIQGKRLLNAAMNALLTFPDPVNSESSSTVQSETTEEKPSVIW 485
Query: 206 HALYIQELSTGSVGSISSMPMPDMNLNYNDAIEATEKIYQMMYPNEEFFPETITSDIPED 27
LY+QE+STG SI+ PMPD NLNYND ++A K++Q MYPNEE FPET + ED
Sbjct: 486 SGLYMQEMSTGQFDSINFAPMPDGNLNYNDILDAALKLFQEMYPNEENFPETTPPENSED 545
Query: 26 NDDIDTET 3
+ + ET
Sbjct: 546 DIGLTLET 553