BLASTX nr result

ID: Bupleurum21_contig00003542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003542
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512916.1| syntaxin, putative [Ricinus communis] gi|223...   305   1e-80
ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223...   302   7e-80
ref|XP_002268695.1| PREDICTED: syntaxin-112 [Vitis vinifera]          302   7e-80
ref|XP_002284067.1| PREDICTED: syntaxin-112-like [Vitis vinifera]     301   1e-79
emb|CAN76259.1| hypothetical protein VITISV_001925 [Vitis vinifera]   301   2e-79

>ref|XP_002512916.1| syntaxin, putative [Ricinus communis] gi|223547927|gb|EEF49419.1|
           syntaxin, putative [Ricinus communis]
          Length = 296

 Score =  305 bits (780), Expect = 1e-80
 Identities = 149/240 (62%), Positives = 193/240 (80%)
 Frame = +3

Query: 6   GQLSPRDEDNLSAFFQEVDAIKTSMKEISXXXXXXXXXXXEAKSTHSIKLLRGIRDRMDS 185
           G+L P DE NL+ FF+EV+ IKT M+EI+           ++KSTHS K+L+GIRDR++S
Sbjct: 32  GELDPADEKNLTKFFEEVNGIKTEMEEITNLLLDLQDLNEDSKSTHSTKVLKGIRDRINS 91

Query: 186 DVVSVLRVAKLVKDRLESLDKSNVKNRKISVAFKEGSAVDRTRIVVTNGLRIKLREIMND 365
           D+V++LR AK++K RLESLDKSNV NR +S+A+KEGS +DRTR+ VT+GLR+KLRE+M+ 
Sbjct: 92  DMVTILRKAKIIKSRLESLDKSNVANRSLSMAYKEGSPIDRTRVSVTDGLRVKLREMMHH 151

Query: 366 FQTLREKIMLDYKEYLKRRYFNATGEAPCEEVIERMVLGSGNVAIFEGKTEVYLENKERH 545
           FQ LRE+I+ D++E LKRRY+N TGE P EEV+E+MVLG G   +FEGK ++ LENKERH
Sbjct: 152 FQALREQILKDHREGLKRRYYNVTGEHPSEEVLEKMVLGGGKEKVFEGKVDLVLENKERH 211

Query: 546 EAAMDIQRSLQKLHQVFLDMAVLAEAQGEKIDDIEHNVAIAGSYIAGGTNSLHYAKQMKK 725
           EA  DIQRSL +LHQ+FLDMAVL E QG++ID+IE NVA   +YI+GGTN L+YAKQMKK
Sbjct: 212 EALKDIQRSLTELHQLFLDMAVLIETQGDEIDNIEENVARGRTYISGGTNGLYYAKQMKK 271


>ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223539242|gb|EEF40835.1|
           syntaxin, putative [Ricinus communis]
          Length = 493

 Score =  302 bits (773), Expect = 7e-80
 Identities = 155/242 (64%), Positives = 191/242 (78%), Gaps = 1/242 (0%)
 Frame = +3

Query: 12  LSPRDEDNLSAFFQEVDAIKTSMKEISXXXXXXXXXXXEAKSTHSIKLLRGIRDRMDSDV 191
           L+P D+ NLS FFQEVDAIK  M E +           E KSTHS K+LRG+RDRM++++
Sbjct: 228 LNPTDDPNLSQFFQEVDAIKAEMVETTNLLFDLQTLDQETKSTHSNKVLRGLRDRMEANI 287

Query: 192 VSVLRVAKLVKDRLESLDKSNVKNRKISVAFKEGSAVDRTRIVVTNGLRIKLREIMNDFQ 371
           V+VLR AK VK RLESLD+SN  +RKIS  +KEGS VDRTRI+VTNGLR++LREIMN+FQ
Sbjct: 288 VAVLRKAKTVKARLESLDQSNQFSRKISELYKEGSPVDRTRILVTNGLRVQLREIMNEFQ 347

Query: 372 TLREKIMLDYKEYLKRRYFNATGEAPCEEVIERMVLGSGNVAIFEGKT-EVYLENKERHE 548
            LREKI+ DYK  LKRRY+ ATGE P EE+IE+++ GSG V +F GK   V +++KERHE
Sbjct: 348 LLREKILCDYKADLKRRYYTATGEEPSEEIIEKIISGSGEVQLFAGKEGAVDMKSKERHE 407

Query: 549 AAMDIQRSLQKLHQVFLDMAVLAEAQGEKIDDIEHNVAIAGSYIAGGTNSLHYAKQMKKR 728
           + MDIQRSL KLHQVFLDMAV+ E QGEK+DDIE NVA AG++I+GGTNSL+YA QMKK+
Sbjct: 408 SVMDIQRSLTKLHQVFLDMAVIVETQGEKLDDIEENVAYAGNFISGGTNSLYYANQMKKK 467

Query: 729 NR 734
            +
Sbjct: 468 RK 469


>ref|XP_002268695.1| PREDICTED: syntaxin-112 [Vitis vinifera]
          Length = 299

 Score =  302 bits (773), Expect = 7e-80
 Identities = 154/240 (64%), Positives = 193/240 (80%)
 Frame = +3

Query: 6   GQLSPRDEDNLSAFFQEVDAIKTSMKEISXXXXXXXXXXXEAKSTHSIKLLRGIRDRMDS 185
           G+L P+DE+NLS FF+EV AIKT M+EI+           E KSTHS K+LRG+RDRMDS
Sbjct: 34  GKLKPKDEENLSQFFEEVAAIKTVMEEITNLVRDLHNLNEETKSTHSAKVLRGLRDRMDS 93

Query: 186 DVVSVLRVAKLVKDRLESLDKSNVKNRKISVAFKEGSAVDRTRIVVTNGLRIKLREIMND 365
           + +++LR AK+VK RLE++DKSNV+NR+IS A++EGS VDRTRI VTNGLR KLR++MND
Sbjct: 94  NALTILRKAKVVKARLEAIDKSNVRNRRISEAYREGSPVDRTRISVTNGLRSKLRDMMND 153

Query: 366 FQTLREKIMLDYKEYLKRRYFNATGEAPCEEVIERMVLGSGNVAIFEGKTEVYLENKERH 545
           F +LRE+I+ D++E LKRRY+NATG    EEV+E+M+ GS  +  FEGKT   L N+ER+
Sbjct: 154 FNSLRERILWDHRETLKRRYYNATGSEASEEVVEKMMTGSVQIEAFEGKTGGDLVNRERN 213

Query: 546 EAAMDIQRSLQKLHQVFLDMAVLAEAQGEKIDDIEHNVAIAGSYIAGGTNSLHYAKQMKK 725
           EA  +IQRSL KL QVFLDMAVL E+QGEK+DDIE NVAIAG++I+GGTNSL YAKQMKK
Sbjct: 214 EALREIQRSLDKLRQVFLDMAVLVESQGEKMDDIEENVAIAGNFISGGTNSLVYAKQMKK 273


>ref|XP_002284067.1| PREDICTED: syntaxin-112-like [Vitis vinifera]
          Length = 299

 Score =  301 bits (771), Expect = 1e-79
 Identities = 150/242 (61%), Positives = 192/242 (79%)
 Frame = +3

Query: 6   GQLSPRDEDNLSAFFQEVDAIKTSMKEISXXXXXXXXXXXEAKSTHSIKLLRGIRDRMDS 185
           G+L P DE NL+ FF+EV AIKT M+EI            E+KSTHS K+LRG+RDR++S
Sbjct: 32  GKLDPTDEQNLTNFFEEVGAIKTDMEEIVNLLLDLQDLNEESKSTHSAKVLRGLRDRINS 91

Query: 186 DVVSVLRVAKLVKDRLESLDKSNVKNRKISVAFKEGSAVDRTRIVVTNGLRIKLREIMND 365
           D+V++LR AK +K RL SLD+SN+ NR IS A+KEGS +DRTR+ VTNGLRIKLR++MND
Sbjct: 92  DMVTILRKAKNIKARLGSLDQSNIDNRSISAAYKEGSPIDRTRMSVTNGLRIKLRDMMND 151

Query: 366 FQTLREKIMLDYKEYLKRRYFNATGEAPCEEVIERMVLGSGNVAIFEGKTEVYLENKERH 545
           FQ+LR++I+ D+KE LKRRYFNATGE P EEV+E+M+LG G V +F+GK ++ +EN+ERH
Sbjct: 152 FQSLRDQIVKDHKECLKRRYFNATGEEPSEEVVEKMILGGGQVNVFDGKADLVMENQERH 211

Query: 546 EAAMDIQRSLQKLHQVFLDMAVLAEAQGEKIDDIEHNVAIAGSYIAGGTNSLHYAKQMKK 725
           EA  +IQRSL +LHQVFLDMAVL E QGE+++DIE NVA AG YI+ GT  L  AKQ+KK
Sbjct: 212 EALKEIQRSLTELHQVFLDMAVLVERQGEEVNDIEQNVAQAGDYISEGTKKLDSAKQLKK 271

Query: 726 RN 731
           R+
Sbjct: 272 RS 273


>emb|CAN76259.1| hypothetical protein VITISV_001925 [Vitis vinifera]
          Length = 963

 Score =  301 bits (770), Expect = 2e-79
 Identities = 150/241 (62%), Positives = 191/241 (79%)
 Frame = +3

Query: 6   GQLSPRDEDNLSAFFQEVDAIKTSMKEISXXXXXXXXXXXEAKSTHSIKLLRGIRDRMDS 185
           G+L P DE NL+ FF+EV AIKT M+EI            E+KSTHS K+LRG+RDR++S
Sbjct: 32  GKLDPTDEQNLTNFFEEVGAIKTDMEEIVNLLLDLQDLNEESKSTHSAKVLRGLRDRINS 91

Query: 186 DVVSVLRVAKLVKDRLESLDKSNVKNRKISVAFKEGSAVDRTRIVVTNGLRIKLREIMND 365
           D+V++LR AK +K RL SLD+SN+ NR IS A+KEGS +DRTR+ VTNGLRIKLR++MND
Sbjct: 92  DMVTILRKAKNIKARLGSLDQSNIDNRSISAAYKEGSPIDRTRMSVTNGLRIKLRDMMND 151

Query: 366 FQTLREKIMLDYKEYLKRRYFNATGEAPCEEVIERMVLGSGNVAIFEGKTEVYLENKERH 545
           FQ+LR++I+ D+KE LKRRYFNATGE P EEV+E+M+LG G V +F+GK ++ +EN+ERH
Sbjct: 152 FQSLRDQIVKDHKECLKRRYFNATGEEPSEEVVEKMILGGGQVNVFDGKADLVMENQERH 211

Query: 546 EAAMDIQRSLQKLHQVFLDMAVLAEAQGEKIDDIEHNVAIAGSYIAGGTNSLHYAKQMKK 725
           EA  +IQRSL +LHQVFLDMAVL E QGE+++DIE NVA AG YI+ GT  L  AKQ+KK
Sbjct: 212 EALKEIQRSLTELHQVFLDMAVLVERQGEEVNDIEQNVAQAGDYISEGTKKLDSAKQLKK 271

Query: 726 R 728
           R
Sbjct: 272 R 272


Top