BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003537
         (1370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261...   238   3e-60
emb|CBI35016.3| unnamed protein product [Vitis vinifera]              225   2e-56
gb|AFK35180.1| unknown [Lotus japonicus]                              202   2e-49
ref|XP_003618391.1| CCR4-NOT transcription complex subunit [Medi...   184   6e-44
ref|NP_001030828.1| RING/U-box domain-containing protein [Arabid...   181   5e-43

>ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261085 [Vitis vinifera]
          Length = 332

 Score =  238 bits (607), Expect = 3e-60
 Identities = 137/299 (45%), Positives = 169/299 (56%), Gaps = 9/299 (3%)
 Frame = -3

Query: 1143 FSKDIGKKKRTNRLAKLKQSKLDVRREQWLSHVKNKEMNSDSNGRSRSPPLFSLVTGESN 964
            FSKD+ KKKRTNR A+LKQSKLDVRREQWLS VKNK    DS+GR  SPP    +    N
Sbjct: 16   FSKDLAKKKRTNRSARLKQSKLDVRREQWLSQVKNKGCEVDSSGRGGSPPSCMQIPHMQN 75

Query: 963  KSSESSDLGSKELDIEVSSILESDLDSLMSSPVGXXXXXXXXXXXXXXXXXXXXXXXXXX 784
            +  E+S++ S+E + + SSI +SDL+SL++SPVG                          
Sbjct: 76   RLVETSEMRSREEENDNSSIHDSDLESLLNSPVGSSLDSNASRKDHPRSSSSTSSDCCSR 135

Query: 783  E-------DNCLDDWETIADALIATETRHEQKIDFPTQGVKNNGSPDTKSVTQIPHTTLK 625
                    D CLDDWE +ADAL   + +     + P +     GS DT+   +     L 
Sbjct: 136  SLSEEEEDDGCLDDWEAVADALGINDNQQNPISEPPVKPEARIGSADTELPKRSSGVDLL 195

Query: 624  EKECKKMVSGARGKPQAWRLDDASRPQSLPNPLKQNYQKLXXXXXXXXXXXR--QIVEPQ 451
            + E   +V  ++   +AWR DDA RPQSLPN  KQ    +              +    Q
Sbjct: 196  KTESGGVVPISQMNSRAWRPDDALRPQSLPNLSKQCTFPMNSERHCHRAIPWAWKSTISQ 255

Query: 450  TSSCPICYEDLDPTDSSFLPCPCGFRLCLFCHKRITEGDARCPGCRKEYEHIRGDLGFN 274
             SSCPIC EDLD TDSSFLPC CGFRLCLFCHKRI E D RCPGCRK+Y+ I GD+GFN
Sbjct: 256  PSSCPICCEDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHGDVGFN 314


>emb|CBI35016.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  225 bits (574), Expect = 2e-56
 Identities = 135/299 (45%), Positives = 164/299 (54%), Gaps = 9/299 (3%)
 Frame = -3

Query: 1143 FSKDIGKKKRTNRLAKLKQSKLDVRREQWLSHVKNKEMNSDSNGRSRSPPLFSLVTGESN 964
            FSKD+ KKKRTNR A+LKQSKLDVRREQWLS VKNK    DS+GR  SPP    +    N
Sbjct: 16   FSKDLAKKKRTNRSARLKQSKLDVRREQWLSQVKNKGCEVDSSGRGGSPPSCMQIPHMQN 75

Query: 963  KSSESSDLGSKELDIEVSSILESDLDSLMSSPVGXXXXXXXXXXXXXXXXXXXXXXXXXX 784
            +  E+S++ S+E + + SSI +SDL+SL++SPVG                          
Sbjct: 76   RLVETSEMRSREEENDNSSIHDSDLESLLNSPVGSSLDSNASRKDHPRSSSSTSSDCCSR 135

Query: 783  E-------DNCLDDWETIADALIATETRHEQKIDFPTQGVKNNGSPDTKSVTQIPHTTLK 625
                    D CLDDWE +ADAL                G+ +N         Q P +   
Sbjct: 136  SLSEEEEDDGCLDDWEAVADAL----------------GINDN--------QQNPISEPP 171

Query: 624  EKECKKMVSGARGKPQAWRLDDASRPQSLPNPLKQNYQKLXXXXXXXXXXXR--QIVEPQ 451
             K   ++V  ++   +AWR DDA RPQSLPN  KQ    +              +    Q
Sbjct: 172  VKPEARIVPISQMNSRAWRPDDALRPQSLPNLSKQCTFPMNSERHCHRAIPWAWKSTISQ 231

Query: 450  TSSCPICYEDLDPTDSSFLPCPCGFRLCLFCHKRITEGDARCPGCRKEYEHIRGDLGFN 274
             SSCPIC EDLD TDSSFLPC CGFRLCLFCHKRI E D RCPGCRK+Y+ I GD+GFN
Sbjct: 232  PSSCPICCEDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHGDVGFN 290


>gb|AFK35180.1| unknown [Lotus japonicus]
          Length = 322

 Score =  202 bits (513), Expect = 2e-49
 Identities = 126/308 (40%), Positives = 156/308 (50%), Gaps = 16/308 (5%)
 Frame = -3

Query: 1149 TGFSKD--IGKKKRTNRLAKLKQSKLDVRREQWLSHVKNKEMNSDSNGRSRSPPLFSLVT 976
            +GF  D  + KKKRTN  AKLKQ KLDVRREQWLS VK K  N DSNGR  + P      
Sbjct: 3    SGFISDPPLSKKKRTNGSAKLKQIKLDVRREQWLSRVK-KGCNVDSNGRMDNCPSSKHTA 61

Query: 975  GESNKSSESSDLGSKELDIEVSSILESDLDSLMSSP--------VGXXXXXXXXXXXXXX 820
             E N+SS   ++  K  DIE + I +SD  S ++SP                        
Sbjct: 62   SEENRSS-CKEMTRKGEDIEGTCIQDSDSRSTINSPDRSTYSHDESSGKDFSGSSSNSIS 120

Query: 819  XXXXXXXXXXXXEDNCLDDWETIADALIATETRHEQKIDFPTQG---VKNNGSPDTKSVT 649
                        +D CLDDWE +ADAL A +  H    + P +     +     D K+  
Sbjct: 121  TSCSGNDSEEEDDDGCLDDWEAVADALYANDKSHSVVSESPAEHEAECRYTVLEDDKN-- 178

Query: 648  QIPHTTLKEKECKKMVSGARGKPQAWRLDDASRPQSLPNPLKQNYQKLXXXXXXXXXXXR 469
              P     + + K  V  ++   +AW+ DD  RP+ LPN  KQ    L            
Sbjct: 179  --PRVDFSKADFKSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNPNWRGSRKTVP 236

Query: 468  ---QIVEPQTSSCPICYEDLDPTDSSFLPCPCGFRLCLFCHKRITEGDARCPGCRKEYEH 298
               Q + PQ S CPICYEDLD TDSSFLPC CGF LCLFCHK+I E DARCP CRK Y+H
Sbjct: 237  WAWQTIIPQPSQCPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLYDH 296

Query: 297  IRGDLGFN 274
            + G++G N
Sbjct: 297  VDGNVGLN 304


>ref|XP_003618391.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355493406|gb|AES74609.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 313

 Score =  184 bits (466), Expect = 6e-44
 Identities = 114/293 (38%), Positives = 143/293 (48%), Gaps = 5/293 (1%)
 Frame = -3

Query: 1125 KKKRTNRLAKLKQSKLDVRREQWLSHVKNKEMNSDSNGRSRSPPLFSLVTGESNKSS--E 952
            KKKRTN  AKLKQ KLDVRREQWLS VK K  + DS GR  S P    +  E N+ S  E
Sbjct: 14   KKKRTNGSAKLKQIKLDVRREQWLSRVK-KGCDVDSTGRVDSYPSAKHIASEENQPSYKE 72

Query: 951  SSDLGSKELDIEVSSILESDLDSLMSSPVGXXXXXXXXXXXXXXXXXXXXXXXXXXEDNC 772
                G ++      +   S +++ + S                             ED C
Sbjct: 73   IRRKGREDGTCIQGNDSGSIINNSIQSSYNHDESRNGFNGSRSSSTSAFSSGNLTEEDGC 132

Query: 771  LDDWETIADALIATETRHEQKIDFPTQGVKNNGSPDTKSVTQIPHTTLKEKECKKMVSGA 592
            LDDWE +ADAL A    H    + P +   N    +             +KE    VS +
Sbjct: 133  LDDWEAVADALNANSNEHSMVSESPIEHTINYVDSEAAK------KDFSKKEFSSAVSES 186

Query: 591  RGKPQAWRLDDASRPQSLPNPLKQNYQKLXXXXXXXXXXXR---QIVEPQTSSCPICYED 421
                +AW+ DDA RP+ LP+  K +  +L               + +  Q S CPICYED
Sbjct: 187  HMSCRAWKPDDALRPRCLPDLSKPHNSQLNSNWHGSHKIVPWSWRTIVSQPSQCPICYED 246

Query: 420  LDPTDSSFLPCPCGFRLCLFCHKRITEGDARCPGCRKEYEHIRGDLGFNPEVD 262
            LD TDS FLPC CGF LCLFCHK+I E D RCPGCRK Y+H+ G +GFN E +
Sbjct: 247  LDVTDSEFLPCSCGFHLCLFCHKKIVEADGRCPGCRKLYDHVDGTVGFNIETN 299


>ref|NP_001030828.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|332644843|gb|AEE78364.1| RING/U-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 350

 Score =  181 bits (458), Expect = 5e-43
 Identities = 123/304 (40%), Positives = 150/304 (49%), Gaps = 10/304 (3%)
 Frame = -3

Query: 1182 MVSDLIRKDAVTGF--SKDIGKKKRTNRLAKLKQSKLDVRREQWLSHVK------NKEMN 1027
            M+SD I   + T    ++D GKKKRTNR AKLKQSKL +RREQWLS V        +EM 
Sbjct: 1    MISDSITNASATSAPTARDFGKKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEME 60

Query: 1026 SDSNGRSRSPPLFSLVTGESNKSSESSDLGSKELDIE-VSSILESDLDSLMSSPVGXXXX 850
            S+    S  P    L     N   +++     E  IE +S+   S L  + S P      
Sbjct: 61   SNRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSPNSILSGMNSIP---NFS 117

Query: 849  XXXXXXXXXXXXXXXXXXXXXXEDNCLDDWETIADALIATETRHEQKIDFPTQGVKNNGS 670
                                  +D CLDDWE IADAL A + +HE+  + P +  + +  
Sbjct: 118  SSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEK--ENPPESCQEH-- 173

Query: 669  PDTKSVTQIPHTTLKEKECKKMVSGARGKP-QAWRLDDASRPQSLPNPLKQNYQKLXXXX 493
             D K    I    +  ++ K      + K  QAWR DD  RPQ LPN  KQ         
Sbjct: 174  EDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQR-------S 226

Query: 492  XXXXXXXRQIVEPQTSSCPICYEDLDPTDSSFLPCPCGFRLCLFCHKRITEGDARCPGCR 313
                      V    SSCPICYEDLD TDS+FLPCPCGFRLCLFCHK I +GD RCPGCR
Sbjct: 227  FPVMNLHFSSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICDGDGRCPGCR 286

Query: 312  KEYE 301
            K YE
Sbjct: 287  KPYE 290