BLASTX nr result

ID: Bupleurum21_contig00003523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003523
         (1650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicu...   730   0.0  
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi...   707   0.0  
ref|XP_003592874.1| Auxin response factor [Medicago truncatula] ...   705   0.0  
ref|XP_002328802.1| predicted protein [Populus trichocarpa] gi|2...   703   0.0  
ref|XP_002331079.1| predicted protein [Populus trichocarpa] gi|2...   698   0.0  

>ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
            gi|299118178|gb|ADJ10892.1| auxin response factor 1
            [Solanum lycopersicum]
          Length = 654

 Score =  730 bits (1884), Expect = 0.0
 Identities = 358/424 (84%), Positives = 379/424 (89%), Gaps = 3/424 (0%)
 Frame = +3

Query: 387  MVHNDTNHISAGARSG-EASNALFKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST 563
            M H   NH   G   G  A+NAL+KELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST
Sbjct: 1    MAHVAANHFGGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST 60

Query: 564  HQGSDQQLPLFNLPAKILCKVMNVQLRAEPETDEVYAQITLLPEQDQNEVTSPDPPLPEP 743
            HQG DQ LP FNLPAKILCKVMNVQLRAE ETDEVYAQITLLPE DQ E+TSPDPPLPEP
Sbjct: 61   HQGVDQHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITSPDPPLPEP 120

Query: 744  PNCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHGNEWHF 923
              CTVHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMSQQPPWQEL+A+DLHGNEWHF
Sbjct: 121  EKCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHF 180

Query: 924  RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDNGELRVGVRRLMRQLYNMPSSV 1103
            RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGD+GELRVGVRRLMRQL NMPSSV
Sbjct: 181  RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSV 240

Query: 1104 ISSHSMHLGVLATASHAIATGTHFSVYYKPRTSRSEFIVSLNKYLEAQNQKLSVGMRFKM 1283
            ISSHSMHLGVLATASHAI TGT FSV+YKPRTS+SEFIVS+NKYLEA+N KLSVGMRFKM
Sbjct: 241  ISSHSMHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKM 300

Query: 1284 RFEGEEAPERRFSGTIVGVGDGTSSRWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLV 1463
            RFEGEE PERRFSGTIVGVGD  SSRW DSEWRSLKV WDEPSSILRPDRVSPW++EPLV
Sbjct: 301  RFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLV 360

Query: 1464 TATSLNSQPLQKNKRARPTVLPT--QTDPATLGMWKVPVDRPSTFGYSDLSRGQDIFSSP 1637
             AT  N+QP Q+NKRARP+VLP+  Q  PA LGMWK PVD PS+F Y D SRG+D++ SP
Sbjct: 361  AATPTNTQPPQRNKRARPSVLPSPVQELPA-LGMWKSPVDSPSSFSYCDPSRGRDLYPSP 419

Query: 1638 KFSS 1649
            K SS
Sbjct: 420  KLSS 423


>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
            gi|297739458|emb|CBI29640.3| unnamed protein product
            [Vitis vinifera]
          Length = 678

 Score =  707 bits (1825), Expect = 0.0
 Identities = 348/420 (82%), Positives = 376/420 (89%), Gaps = 4/420 (0%)
 Frame = +3

Query: 402  TNHISAGARSGEASNALFKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST-HQGSD 578
            +N+ S G  +G   +AL+KELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST HQG D
Sbjct: 6    SNYPSGGPHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLD 65

Query: 579  QQLPLFNLPAKILCKVMNVQLRAEPETDEVYAQITLLPEQDQNEVTSPDPPLPEPPNCTV 758
            QQ+P FNLP+KILCKV++VQLRAEPETDEVYAQ+TLLPE DQ+E+TSPDPPLPEP  CTV
Sbjct: 66   QQMPSFNLPSKILCKVVHVQLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQRCTV 125

Query: 759  HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHGNEWHFRHIFR 938
            HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQEL+A DLHGNEWHFRHIFR
Sbjct: 126  HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFR 185

Query: 939  GQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDNGELRVGVRRLMRQLYNMPSSVISSHS 1118
            GQPRRHLLTTGWSVFVS+KKLVAGDAFIFLRG+NGELRVGVRRLMRQL NMPSSVISSHS
Sbjct: 186  GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHS 245

Query: 1119 MHLGVLATASHAIATGTHFSVYYKPRTSRSEFIVSLNKYLEAQNQKLSVGMRFKMRFEGE 1298
            MHLGVLATASHAI+TGT FSV+YKPRTSRSEFIVSLNKYLEA+N KLSVGMRFKMRFEGE
Sbjct: 246  MHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGE 305

Query: 1299 EAPERRFSGTIVGVGD-GTSSRWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVTATS 1475
            E PERRFSGTIVGVGD  TSS W DSEWRSLKVQWDEP+SI RP+RVS WELEPLV A +
Sbjct: 306  EVPERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAA 365

Query: 1476 -LNSQPLQKNKRARPTVLPTQT-DPATLGMWKVPVDRPSTFGYSDLSRGQDIFSSPKFSS 1649
              N QP Q+NKRARP VLP+ T D + LGMWK  V+ PS F Y D  RG+D++ SPKFSS
Sbjct: 366  PTNLQPAQRNKRARPPVLPSATPDLSVLGMWKSSVESPSGFPYCDPHRGRDLYPSPKFSS 425


>ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
            gi|355481922|gb|AES63125.1| Auxin response factor
            [Medicago truncatula]
          Length = 671

 Score =  705 bits (1820), Expect = 0.0
 Identities = 341/418 (81%), Positives = 375/418 (89%), Gaps = 2/418 (0%)
 Frame = +3

Query: 402  TNHISA-GARSGEASNALFKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGSD 578
            +NH+SA  +R+G  ++AL+KELWHACAGPLVT+PREGERVYYFPQGHMEQLEAS +QG +
Sbjct: 3    SNHMSAVTSRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLE 62

Query: 579  QQLPLFNLPAKILCKVMNVQLRAEPETDEVYAQITLLPEQDQNEVTSPDPPLPEPPNCTV 758
            QQ+P FNLP+KILCKV+N+ LRAEPETDEVYAQITLLPE DQ+EVTSPD PLPEPP CTV
Sbjct: 63   QQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTV 122

Query: 759  HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHGNEWHFRHIFR 938
            HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDM+QQPPWQEL+ATDLHGNEWHFRHIFR
Sbjct: 123  HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFR 182

Query: 939  GQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDNGELRVGVRRLMRQLYNMPSSVISSHS 1118
            GQPRRHLLTTGWSVFVS+KKLVAGDAFIFLRG+NGELRVGVRRLMRQ  NMPSSVISSHS
Sbjct: 183  GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHS 242

Query: 1119 MHLGVLATASHAIATGTHFSVYYKPRTSRSEFIVSLNKYLEAQNQKLSVGMRFKMRFEGE 1298
            MHLGVLATASHAI+TGT FSV+YKPRTSRSEFIVS+NKYLEA+N KLSVGMRFKMRFEG+
Sbjct: 243  MHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGD 302

Query: 1299 EAPERRFSGTIVGVGDGTSSRWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVTATSL 1478
            E PERRFSGTIVGV D  SS W DSEWRSLKVQWDEPSSILRPDRVSPWELEPLV+    
Sbjct: 303  EVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPA 362

Query: 1479 NSQPLQKNKRARPTVLP-TQTDPATLGMWKVPVDRPSTFGYSDLSRGQDIFSSPKFSS 1649
            NSQP Q+NKR+RP +LP T TD +  G+WK P D P  F Y D   G+D++ SP+FSS
Sbjct: 363  NSQPTQRNKRSRPPILPSTMTDSSLQGIWKSPADSP-PFPYRDPQHGRDLYPSPRFSS 419


>ref|XP_002328802.1| predicted protein [Populus trichocarpa] gi|222839100|gb|EEE77451.1|
            predicted protein [Populus trichocarpa]
          Length = 662

 Score =  703 bits (1815), Expect = 0.0
 Identities = 343/417 (82%), Positives = 371/417 (88%), Gaps = 2/417 (0%)
 Frame = +3

Query: 405  NHISAG-ARSGEASNALFKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGSDQ 581
            NH S G   +G  ++AL+KELWHACAGPLVT+PREGE VYYFPQGHMEQLEAS HQG + 
Sbjct: 7    NHTSGGNPHAGGCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEP 66

Query: 582  QLPLFNLPAKILCKVMNVQLRAEPETDEVYAQITLLPEQDQNEVTSPDPPLPEPPNCTVH 761
            Q+PLFNLP+KILCKV+NVQ RAEPETDEVYAQITLLPE DQ+EVTSPDPPLPEP  CTVH
Sbjct: 67   QMPLFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVH 126

Query: 762  SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHGNEWHFRHIFRG 941
            SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQEL+ATDLHGNEWHFRHIFRG
Sbjct: 127  SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRG 186

Query: 942  QPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDNGELRVGVRRLMRQLYNMPSSVISSHSM 1121
            QPRRHLLTTGWSVFVS+KKLVAGDAFIFLRG+NGELRVGVRRLMRQ  NMPSSVISS SM
Sbjct: 187  QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSM 246

Query: 1122 HLGVLATASHAIATGTHFSVYYKPRTSRSEFIVSLNKYLEAQNQKLSVGMRFKMRFEGEE 1301
            HLGVLATASHAIATGT FSV+YKPRTSRSEFIVSLNKYLE +N KLSVGMRFKMRFEGEE
Sbjct: 247  HLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGEE 306

Query: 1302 APERRFSGTIVGVGDGTSSRWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVTATSLN 1481
             PERRFSGTIVGVGD  SS W DS+WRSLKVQWDEPSSI+RP+RVS WELEPLV  T  N
Sbjct: 307  VPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVATTPSN 366

Query: 1482 SQPLQKNKRARPTVLPTQT-DPATLGMWKVPVDRPSTFGYSDLSRGQDIFSSPKFSS 1649
            SQP+Q+NKRARP V+P+ T D + LGMWK PV+  S   Y D  RG+D++SSP FS+
Sbjct: 367  SQPVQRNKRARPYVIPSPTADLSALGMWKSPVE-SSALSYGDSQRGRDLYSSPNFST 422


>ref|XP_002331079.1| predicted protein [Populus trichocarpa] gi|222872807|gb|EEF09938.1|
            predicted protein [Populus trichocarpa]
          Length = 660

 Score =  698 bits (1801), Expect = 0.0
 Identities = 341/417 (81%), Positives = 369/417 (88%), Gaps = 2/417 (0%)
 Frame = +3

Query: 405  NHISAG-ARSGEASNALFKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGSDQ 581
            NH S G    G  ++AL+KELWHACAGPLVT+P EGERVYYFPQGHMEQLEAS HQG +Q
Sbjct: 2    NHTSGGNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQ 61

Query: 582  QLPLFNLPAKILCKVMNVQLRAEPETDEVYAQITLLPEQDQNEVTSPDPPLPEPPNCTVH 761
            Q+P FNLP+KILCKV+NVQ RAEPETDEVYAQITLLPE DQ+EVTSPDPPLPEP  CTVH
Sbjct: 62   QMPSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVH 121

Query: 762  SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELIATDLHGNEWHFRHIFRG 941
            SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQEL+ATDLHGNEWHFRHIFRG
Sbjct: 122  SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRG 181

Query: 942  QPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDNGELRVGVRRLMRQLYNMPSSVISSHSM 1121
            QPRRHLLTTGWSVFVS+KKLVAGDAFIFLRG+NGELRVGVRRLMRQ  NMPSSVISS SM
Sbjct: 182  QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSM 241

Query: 1122 HLGVLATASHAIATGTHFSVYYKPRTSRSEFIVSLNKYLEAQNQKLSVGMRFKMRFEGEE 1301
            HLGVLATASHAIATGT FSV+YKPRTSRSEFIV+LNKY+EAQN KLSVGMRFKMRFEGEE
Sbjct: 242  HLGVLATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGEE 301

Query: 1302 APERRFSGTIVGVGDGTSSRWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVTATSLN 1481
             PERRFSGTIVGVGD  SS W DSEWRSLKV WDEPSSILRP+RVSPW+LEPLV  T  N
Sbjct: 302  VPERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSN 361

Query: 1482 SQPLQKNKRARPTVLPTQT-DPATLGMWKVPVDRPSTFGYSDLSRGQDIFSSPKFSS 1649
            SQP+Q+NKR RP+VLP+ T + + LGMWK  V+  S F Y +  RG+D + SP FS+
Sbjct: 362  SQPMQRNKRPRPSVLPSPTANLSALGMWKPSVE-SSAFSYGESQRGRDPYPSPNFST 417


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