BLASTX nr result

ID: Bupleurum21_contig00003522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003522
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Viti...   148   7e-34
emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]   148   7e-34
ref|XP_003516355.1| PREDICTED: uncharacterized protein LOC100783...   146   3e-33
ref|NP_565921.1| Clathrin light chain protein [Arabidopsis thali...   143   2e-32
gb|AAM65809.1| unknown [Arabidopsis thaliana]                         143   2e-32

>ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Vitis vinifera]
          Length = 319

 Score =  148 bits (374), Expect = 7e-34
 Identities = 81/150 (54%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
 Frame = -1

Query: 485 FAASDGPILPPPAEILSEEGFALREWRRQNAXXXXXXXXXXXXXXXXXXXEANEFKAEFN 306
           FA SDGPILPPP E+ SEEGFALREWRRQNA                   EA+E+K EF 
Sbjct: 121 FAGSDGPILPPPTEMQSEEGFALREWRRQNAITLEEKEKREKELLSQIIDEADEYKVEFY 180

Query: 305 RKWKIRCENNKVTNREKEKLNLSSQEKFHAEAGQSYW-XXXXXXXXXXXXXXXXXXXXXX 129
           R+  I CE NK TNREKEKL +++QEKFHAEA ++YW                       
Sbjct: 181 RRRTITCETNKTTNREKEKLFIANQEKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQ 240

Query: 128 XXKPSVVVIQGPKPGKPTELSRMRQLLVKL 39
             KPS+VVIQGPKPGKPT+LSRMRQ+L+KL
Sbjct: 241 DKKPSIVVIQGPKPGKPTDLSRMRQILLKL 270


>emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]
          Length = 319

 Score =  148 bits (374), Expect = 7e-34
 Identities = 81/150 (54%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
 Frame = -1

Query: 485 FAASDGPILPPPAEILSEEGFALREWRRQNAXXXXXXXXXXXXXXXXXXXEANEFKAEFN 306
           FA SDGPILPPP E+ SEEGFALREWRRQNA                   EA+E+K EF 
Sbjct: 121 FAGSDGPILPPPTEMQSEEGFALREWRRQNAITLEEKEKREKELLSQIIDEADEYKVEFY 180

Query: 305 RKWKIRCENNKVTNREKEKLNLSSQEKFHAEAGQSYW-XXXXXXXXXXXXXXXXXXXXXX 129
           R+  I CE NK TNREKEKL +++QEKFHAEA ++YW                       
Sbjct: 181 RRRTITCETNKTTNREKEKLFIANQEKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQ 240

Query: 128 XXKPSVVVIQGPKPGKPTELSRMRQLLVKL 39
             KPS+VVIQGPKPGKPT+LSRMRQ+L+KL
Sbjct: 241 DKKPSIVVIQGPKPGKPTDLSRMRQILLKL 270


>ref|XP_003516355.1| PREDICTED: uncharacterized protein LOC100783050 [Glycine max]
          Length = 260

 Score =  146 bits (369), Expect = 3e-33
 Identities = 80/161 (49%), Positives = 97/161 (60%), Gaps = 3/161 (1%)
 Frame = -1

Query: 512 SPEQAGVGV---FAASDGPILPPPAEILSEEGFALREWRRQNAXXXXXXXXXXXXXXXXX 342
           SPEQ G GV   F ASDGPILPPP  ++++EGFALREWR QNA                 
Sbjct: 50  SPEQNGKGVDGGFGASDGPILPPPTNMVAKEGFALREWRMQNAIQLEEKEKKEKEMRSQI 109

Query: 341 XXEANEFKAEFNRKWKIRCENNKVTNREKEKLNLSSQEKFHAEAGQSYWXXXXXXXXXXX 162
             EA E+K EF RK ++  E NK +NRE+EKL L+S+EKFHAEA ++YW           
Sbjct: 110 IEEAEEYKIEFYRKREVNAEKNKASNREREKLFLASREKFHAEADKNYWKTIGELIPHEV 169

Query: 161 XXXXXXXXXXXXXKPSVVVIQGPKPGKPTELSRMRQLLVKL 39
                        KPS+ VIQGPKPGKPT+LSRMR +L+KL
Sbjct: 170 PAIEKRGKKDKVKKPSIAVIQGPKPGKPTDLSRMRHILLKL 210


>ref|NP_565921.1| Clathrin light chain protein [Arabidopsis thaliana]
           gi|75096962|sp|O04209.1|CLC2_ARATH RecName:
           Full=Clathrin light chain 2 gi|2088662|gb|AAB95291.1|
           expressed protein [Arabidopsis thaliana]
           gi|20260192|gb|AAM12994.1| unknown protein [Arabidopsis
           thaliana] gi|21387051|gb|AAM47929.1| unknown protein
           [Arabidopsis thaliana] gi|110741048|dbj|BAE98618.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330254676|gb|AEC09770.1| Clathrin light chain protein
           [Arabidopsis thaliana]
          Length = 258

 Score =  143 bits (361), Expect = 2e-32
 Identities = 83/195 (42%), Positives = 114/195 (58%), Gaps = 6/195 (3%)
 Frame = -1

Query: 605 SSSSFAGVEVTTGESPAEDEVFYTKTASGGASPEQAGVGVFAAS---DGPILPPPAEILS 435
           ++ SF+  + +     + D+VF   ++  GA     G G+F ++   DGPILPPP+E+ S
Sbjct: 28  ATDSFSAFDGSLQVEDSVDDVFAAPSSDYGAYSN--GDGIFGSNGDHDGPILPPPSEMES 85

Query: 434 EEGFALREWRRQNAXXXXXXXXXXXXXXXXXXXEANEFKAEFNRKWKIRCENNKVTNREK 255
           +EGFALREWRRQNA                   EA+++K EF++K ++ CENNK  NREK
Sbjct: 86  DEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHKKIEVTCENNKAANREK 145

Query: 254 EKLNLSSQEKFHAEAGQSYW---XXXXXXXXXXXXXXXXXXXXXXXXKPSVVVIQGPKPG 84
           EKL L +QEKF+AE+ ++YW                           KP+V VIQGPKPG
Sbjct: 146 EKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPG 205

Query: 83  KPTELSRMRQLLVKL 39
           KPT+L+RMRQ+LVKL
Sbjct: 206 KPTDLTRMRQILVKL 220


>gb|AAM65809.1| unknown [Arabidopsis thaliana]
          Length = 258

 Score =  143 bits (361), Expect = 2e-32
 Identities = 83/195 (42%), Positives = 114/195 (58%), Gaps = 6/195 (3%)
 Frame = -1

Query: 605 SSSSFAGVEVTTGESPAEDEVFYTKTASGGASPEQAGVGVFAAS---DGPILPPPAEILS 435
           ++ SF+  + +     + D+VF   ++  GA     G G+F ++   DGPILPPP+E+ S
Sbjct: 28  ATESFSAFDGSLQVEDSVDDVFAAPSSDYGAYSN--GDGIFGSNGDHDGPILPPPSEMES 85

Query: 434 EEGFALREWRRQNAXXXXXXXXXXXXXXXXXXXEANEFKAEFNRKWKIRCENNKVTNREK 255
           +EGFALREWRRQNA                   EA+++K EF++K ++ CENNK  NREK
Sbjct: 86  DEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHKKIEVTCENNKAANREK 145

Query: 254 EKLNLSSQEKFHAEAGQSYW---XXXXXXXXXXXXXXXXXXXXXXXXKPSVVVIQGPKPG 84
           EKL L +QEKF+AE+ ++YW                           KP+V VIQGPKPG
Sbjct: 146 EKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQDPKKPTVSVIQGPKPG 205

Query: 83  KPTELSRMRQLLVKL 39
           KPT+L+RMRQ+LVKL
Sbjct: 206 KPTDLTRMRQILVKL 220


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