BLASTX nr result

ID: Bupleurum21_contig00003371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003371
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246...   120   3e-25
emb|CBI16489.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002530871.1| protein binding protein, putative [Ricinus c...    97   3e-18
ref|XP_003601633.1| Branchpoint-bridging protein [Medicago trunc...    87   2e-15

>ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246694 [Vitis vinifera]
          Length = 866

 Score =  120 bits (300), Expect = 3e-25
 Identities = 78/174 (44%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = -2

Query: 661  PQPLMQGFSRPQVINHTNQPPPYMSS---PSTGNLRFP-NGPPRHPAFPGAGPISPTTSV 494
            P   M  F RPQV N    P   +S+   P T +   P + P R PAF     ++    V
Sbjct: 693  PPATMPPFLRPQVNNQMGPPHSQISAASFPGTPSSLSPMSAPLRPPAFQSPSSVAAAIPV 752

Query: 493  PQMGMRNFSP--QVMNGAGAFPFRPGNTISPQHNYPT---RPQGLFSPNQEF-NGNYPS- 335
            PQ G  NF+P  Q+ N  G FP R GN +  Q N+P    RP    +PNQ F N ++ S 
Sbjct: 753  PQRGPGNFNPVRQISNLPGPFPSRSGNAMQLQQNFPAPPARPGNPSAPNQHFGNMSFASP 812

Query: 334  RPPSNSFGRLQNYDPFSPSSVPPRP-QLSGNPSQPKNQESDPEYEDLMASVGVK 176
            +P S   G  Q YDPFSP+SVP  P Q  GNP++ + QE+DPEYEDLMASVGVK
Sbjct: 813  KPASGPHGAPQIYDPFSPTSVPRAPPQQGGNPAKLRKQENDPEYEDLMASVGVK 866


>emb|CBI16489.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score =  120 bits (300), Expect = 3e-25
 Identities = 78/174 (44%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
 Frame = -2

Query: 661  PQPLMQGFSRPQVINHTNQPPPYMSS---PSTGNLRFP-NGPPRHPAFPGAGPISPTTSV 494
            P   M  F RPQV N    P   +S+   P T +   P + P R PAF     ++    V
Sbjct: 713  PPATMPPFLRPQVNNQMGPPHSQISAASFPGTPSSLSPMSAPLRPPAFQSPSSVAAAIPV 772

Query: 493  PQMGMRNFSP--QVMNGAGAFPFRPGNTISPQHNYPT---RPQGLFSPNQEF-NGNYPS- 335
            PQ G  NF+P  Q+ N  G FP R GN +  Q N+P    RP    +PNQ F N ++ S 
Sbjct: 773  PQRGPGNFNPVRQISNLPGPFPSRSGNAMQLQQNFPAPPARPGNPSAPNQHFGNMSFASP 832

Query: 334  RPPSNSFGRLQNYDPFSPSSVPPRP-QLSGNPSQPKNQESDPEYEDLMASVGVK 176
            +P S   G  Q YDPFSP+SVP  P Q  GNP++ + QE+DPEYEDLMASVGVK
Sbjct: 833  KPASGPHGAPQIYDPFSPTSVPRAPPQQGGNPAKLRKQENDPEYEDLMASVGVK 886


>ref|XP_002304012.1| predicted protein [Populus trichocarpa] gi|222841444|gb|EEE78991.1|
            predicted protein [Populus trichocarpa]
          Length = 771

 Score =  105 bits (261), Expect = 1e-20
 Identities = 76/168 (45%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
 Frame = -2

Query: 658  QPLMQGFSRPQVINHTNQPPPYMSSPSTGNLRFPNGPPRHPAFPGAGPISPTTSVPQMGM 479
            QP    F RPQV N   Q P ++ +P TG+   P    R PAF  A P+ P   V QMG 
Sbjct: 613  QPGRHLFPRPQVGNQLGQVP-FVGNP-TGHSHHP----RLPAFSNASPVGPP--VIQMGS 664

Query: 478  RNFS--PQVMNGAGAFPFRPGNTISPQHNYPT----RPQGLFSPNQEFNGNYPSRPPSNS 317
            RNFS  P + N  G  P RPGN +  Q NYP     R Q +    Q F  +  +RP S  
Sbjct: 665  RNFSLTPHLPNLTGPLPPRPGNPMQLQQNYPAPRAPRGQSIALNQQPFISSASARPASFQ 724

Query: 316  FGRLQNYDPFSPSSVPPRPQLS-GNPSQPKNQESDPEYEDLMASVGVK 176
             G+ Q YDPFSP+SV    Q   GN  + +  E+DPEYEDLMASVGVK
Sbjct: 725  GGQ-QVYDPFSPTSVSAASQQQVGNLGKGRKPENDPEYEDLMASVGVK 771


>ref|XP_002530871.1| protein binding protein, putative [Ricinus communis]
            gi|223529560|gb|EEF31511.1| protein binding protein,
            putative [Ricinus communis]
          Length = 838

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 76/173 (43%), Positives = 89/173 (51%), Gaps = 13/173 (7%)
 Frame = -2

Query: 655  PLMQGFSRPQVINHTNQ-----PPPYMSSPSTGNLRFPNGPPRHPAFPGAGPISPTTSVP 491
            P M  FS P++ N   Q     PP   +  STG L      PR PAF  A PI   T   
Sbjct: 682  PGMHSFSSPRIGNQMGQTQAHMPPIPFAGSSTGTLM----APRVPAFSNASPIMLQT--- 734

Query: 490  QMGMRNFSP--QVMNGAGAFPFRPGNTISPQHNYPT--RPQGLF-SPNQEFNGN--YPSR 332
                RNFSP  Q+ N AG FP RP N +  Q  YP    P+G F  PNQ+ + N  + S 
Sbjct: 735  ----RNFSPIPQLPNLAGPFPPRPPNPLQVQPTYPAPVTPRGNFIPPNQQSSRNLSFASG 790

Query: 331  PPSNSFGRLQNYDPFSPSSVPPRPQLSG-NPSQPKNQESDPEYEDLMASVGVK 176
            P     G  Q YDPFSP+SV   PQ  G N  + +  E+DPEYEDLM SVGVK
Sbjct: 791  P-----GGQQIYDPFSPTSVSNMPQHQGDNLVKGRKPEADPEYEDLMTSVGVK 838


>ref|XP_003601633.1| Branchpoint-bridging protein [Medicago truncatula]
           gi|355490681|gb|AES71884.1| Branchpoint-bridging protein
           [Medicago truncatula]
          Length = 637

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 60/149 (40%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
 Frame = -2

Query: 661 PQPLMQGFSRPQVINHTNQPPPYMSSP----STGNLRFPNGPPRHPAFPGAGPISPTTSV 494
           P   +Q F R QV N  +    Y+S+     S+G++ FP   PRHPAFP AG  SP + V
Sbjct: 499 PDQPLQSFQRTQVSNQLDPDQAYVSAAPFGGSSGSVSFP---PRHPAFPYAGQPSPRSQV 555

Query: 493 PQMGMRNF--SPQVMNGAGAFPFRPGNTISPQHNYPTRP-QGLFSPNQEFNGNYPSRPPS 323
           PQMGMRNF  +PQ+ N A        +     HN  + P QG +  NQ+F+ N       
Sbjct: 556 PQMGMRNFIPAPQMQNLASP------DVQRGMHNRQSYPAQGAWPLNQKFSNNPSLASGK 609

Query: 322 NSFGRLQNYDPFSPSSVPPRPQLSGNPSQ 236
            +    Q YDPFSP+S  P P L GNP +
Sbjct: 610 PAHPADQIYDPFSPTSAAP-PHLKGNPGK 637


Top