BLASTX nr result

ID: Bupleurum21_contig00003361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003361
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462631.1| hypothetical protein SORBIDRAFT_02g029250 [S...   357   1e-96
ref|NP_001149850.1| ribulose-phosphate 3-epimerase [Zea mays] gi...   355   5e-96
ref|XP_002263010.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   354   7e-96
ref|XP_003578384.1| PREDICTED: ribulose-phosphate 3-epimerase, c...   354   9e-96
ref|XP_002300099.1| predicted protein [Populus trichocarpa] gi|1...   353   2e-95

>ref|XP_002462631.1| hypothetical protein SORBIDRAFT_02g029250 [Sorghum bicolor]
           gi|241926008|gb|EER99152.1| hypothetical protein
           SORBIDRAFT_02g029250 [Sorghum bicolor]
          Length = 225

 Score =  357 bits (916), Expect = 1e-96
 Identities = 168/192 (87%), Positives = 186/192 (96%)
 Frame = -1

Query: 576 MVAAKIAPSMLSSDFSNLASEADRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT 397
           M AAKIAPSMLSSDF+NLASEA+RM+  GADWLHMDIMDGHFVPNLTIGAPVI+SLRKHT
Sbjct: 1   MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT 60

Query: 396 KAYLDCHLMVTNPLDYVEPFGKAGASGFTFHVEASKDNWQELVQKIKAKGMKPGVSLKPG 217
           KAYLDCHLMVTNP DYVEPFGKAGASGFTFH+E ++DNWQ+L+Q IK+KGM+PGVSL+PG
Sbjct: 61  KAYLDCHLMVTNPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPG 120

Query: 216 TPVEDLFPLIESENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPTLDIEVDGGLG 37
           TPVE++FPL+E+ENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYP+LDIEVDGGLG
Sbjct: 121 TPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLG 180

Query: 36  PSTIDVAAAAGA 1
           PSTIDVAA+AGA
Sbjct: 181 PSTIDVAASAGA 192


>ref|NP_001149850.1| ribulose-phosphate 3-epimerase [Zea mays]
           gi|195635057|gb|ACG36997.1| ribulose-phosphate
           3-epimerase [Zea mays] gi|223974449|gb|ACN31412.1|
           unknown [Zea mays] gi|414886164|tpg|DAA62178.1| TPA:
           Ribulose-phosphate 3-epimerase [Zea mays]
          Length = 225

 Score =  355 bits (910), Expect = 5e-96
 Identities = 167/192 (86%), Positives = 185/192 (96%)
 Frame = -1

Query: 576 MVAAKIAPSMLSSDFSNLASEADRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT 397
           M AAKIAPSMLSSDF+NLASEA+RM+  GADWLHMDIMDGHFVPNLTIGAPVI+SLRKHT
Sbjct: 1   MAAAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT 60

Query: 396 KAYLDCHLMVTNPLDYVEPFGKAGASGFTFHVEASKDNWQELVQKIKAKGMKPGVSLKPG 217
           KAYLDCHLMVT P DYVEPFGKAGASGFTFH+E ++DNWQ+L+Q IK+KGM+PGVSL+PG
Sbjct: 61  KAYLDCHLMVTKPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPG 120

Query: 216 TPVEDLFPLIESENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPTLDIEVDGGLG 37
           TPVE++FPL+E+ENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYP+LDIEVDGGLG
Sbjct: 121 TPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLG 180

Query: 36  PSTIDVAAAAGA 1
           PSTIDVAA+AGA
Sbjct: 181 PSTIDVAASAGA 192


>ref|XP_002263010.1| PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform-like
           [Vitis vinifera]
          Length = 222

 Score =  354 bits (909), Expect = 7e-96
 Identities = 167/192 (86%), Positives = 184/192 (95%)
 Frame = -1

Query: 576 MVAAKIAPSMLSSDFSNLASEADRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT 397
           M  AKIAPSMLSSDF+NLASEA RMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT
Sbjct: 1   MAPAKIAPSMLSSDFANLASEAQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT 60

Query: 396 KAYLDCHLMVTNPLDYVEPFGKAGASGFTFHVEASKDNWQELVQKIKAKGMKPGVSLKPG 217
            AYLDCHLMVTNPLDYVEP GKAGASGFTFHVE SK+NWQELV++I++KGM+PGV+LKPG
Sbjct: 61  NAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQELVERIRSKGMRPGVALKPG 120

Query: 216 TPVEDLFPLIESENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPTLDIEVDGGLG 37
           TP+E+++PL+E ENPVE+VLVMTVEPGFGGQKFMPEMMDKVR LRKKYP+LDIEVDGGLG
Sbjct: 121 TPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDKVRALRKKYPSLDIEVDGGLG 180

Query: 36  PSTIDVAAAAGA 1
           PSTID+AA+AGA
Sbjct: 181 PSTIDMAASAGA 192


>ref|XP_003578384.1| PREDICTED: ribulose-phosphate 3-epimerase, cytoplasmic isoform-like
           isoform 1 [Brachypodium distachyon]
          Length = 225

 Score =  354 bits (908), Expect = 9e-96
 Identities = 166/192 (86%), Positives = 184/192 (95%)
 Frame = -1

Query: 576 MVAAKIAPSMLSSDFSNLASEADRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHT 397
           M AAKIAPSMLSSDF+NLA+EA+RML  GADWLHMD+MDGHFVPNLTIGAPVI+SLRKHT
Sbjct: 1   MAAAKIAPSMLSSDFANLAAEAERMLRLGADWLHMDVMDGHFVPNLTIGAPVIQSLRKHT 60

Query: 396 KAYLDCHLMVTNPLDYVEPFGKAGASGFTFHVEASKDNWQELVQKIKAKGMKPGVSLKPG 217
           KAYLDCHLMVTNP DYVE FGKAGASGFTFH+E S+DNW+EL++ IKAKGM+PGVSL+PG
Sbjct: 61  KAYLDCHLMVTNPSDYVEAFGKAGASGFTFHIEVSRDNWEELIKSIKAKGMRPGVSLRPG 120

Query: 216 TPVEDLFPLIESENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPTLDIEVDGGLG 37
           TPVED+FPL+E+ENPVELVL+MTVEPGFGGQKFMPEMMDKVRTLRKKYP+LDIEVDGGLG
Sbjct: 121 TPVEDVFPLVEAENPVELVLIMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLG 180

Query: 36  PSTIDVAAAAGA 1
           PSTID AA+AGA
Sbjct: 181 PSTIDAAASAGA 192


>ref|XP_002300099.1| predicted protein [Populus trichocarpa] gi|118488638|gb|ABK96131.1|
           unknown [Populus trichocarpa]
           gi|222847357|gb|EEE84904.1| predicted protein [Populus
           trichocarpa]
          Length = 226

 Score =  353 bits (905), Expect = 2e-95
 Identities = 168/191 (87%), Positives = 183/191 (95%)
 Frame = -1

Query: 573 VAAKIAPSMLSSDFSNLASEADRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTK 394
           VAAKIAPSMLSSDF+NLASEA RML  GADWLHMDIMDGHFVPNLTIGAPVIESLRKHTK
Sbjct: 3   VAAKIAPSMLSSDFANLASEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTK 62

Query: 393 AYLDCHLMVTNPLDYVEPFGKAGASGFTFHVEASKDNWQELVQKIKAKGMKPGVSLKPGT 214
           AYLDCHLMVTNPLDYVEP GKAGASGFTFHVE S+DNW +LVQ+IK+KGM+PGVSLKPGT
Sbjct: 63  AYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSRDNWGDLVQRIKSKGMRPGVSLKPGT 122

Query: 213 PVEDLFPLIESENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPTLDIEVDGGLGP 34
           P+E+++PL+E ENPVE+VLVMTVEPGFGGQKFMPE MDKVRTLRKKYP+LDIEVDGGLGP
Sbjct: 123 PIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPETMDKVRTLRKKYPSLDIEVDGGLGP 182

Query: 33  STIDVAAAAGA 1
           STID+AA+AGA
Sbjct: 183 STIDMAASAGA 193


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