BLASTX nr result

ID: Bupleurum21_contig00003319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003319
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40788.3| unnamed protein product [Vitis vinifera]              300   1e-79
ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like pr...   300   1e-79
ref|XP_002307006.1| predicted protein [Populus trichocarpa] gi|2...   271   1e-70
ref|XP_002510746.1| Squamosa promoter-binding protein, putative ...   268   1e-69
ref|XP_004145609.1| PREDICTED: squamosa promoter-binding-like pr...   267   2e-69

>emb|CBI40788.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  300 bits (769), Expect = 1e-79
 Identities = 155/237 (65%), Positives = 182/237 (76%)
 Frame = +1

Query: 4    RFKFLFNFSVENDLSAVVKTLLDILCDICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 183
            RFKFLF FSVE D  A+VKTLLDIL +  LGSD LS KSLE L E+ LL +AVKRR RKM
Sbjct: 670  RFKFLFTFSVERDCCALVKTLLDILVERNLGSDGLSSKSLETLSEVQLLSRAVKRRYRKM 729

Query: 184  VDLLINYFVPTVTNKTYIFPPNLVGPGGITALHLAACMPDSEVMVDTLTNDPQEIGLHGW 363
            VDLLI+Y V + ++K YIFPPNLVG GGIT LHLAAC   S+ ++D LT+DPQEIGLH W
Sbjct: 730  VDLLIHYSVASSSSKKYIFPPNLVGAGGITPLHLAACTAGSDDIIDALTSDPQEIGLHSW 789

Query: 364  DSLLDENGLSPHAYAQMRNNDSYNELVARKLIDRNNGQVSVLVGNGIQEHLLNMGLRHPA 543
            +SLLD +G SP+AYA MRNN SYN LVARKL DR NGQVS+ + N +++    +G     
Sbjct: 790  NSLLDASGQSPYAYAMMRNNHSYNRLVARKLADRRNGQVSLSIENAMEQPWPKVGQEQ-- 847

Query: 544  SFQIGQRQKSCSKCAVVASRYIRKTSASQGLLHRPYIHSMLAIAAVCVCVCLFLRGA 714
                GQ + SC+KCAVVA++Y R+   SQGLLHRPYIHSMLAIAAVCVCVCLFLRG+
Sbjct: 848  --HFGQGRSSCAKCAVVAAKYSRRMPGSQGLLHRPYIHSMLAIAAVCVCVCLFLRGS 902


>ref|XP_002273784.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Vitis
            vinifera]
          Length = 1070

 Score =  300 bits (769), Expect = 1e-79
 Identities = 155/237 (65%), Positives = 182/237 (76%)
 Frame = +1

Query: 4    RFKFLFNFSVENDLSAVVKTLLDILCDICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 183
            RFKFLF FSVE D  A+VKTLLDIL +  LGSD LS KSLE L E+ LL +AVKRR RKM
Sbjct: 819  RFKFLFTFSVERDCCALVKTLLDILVERNLGSDGLSSKSLETLSEVQLLSRAVKRRYRKM 878

Query: 184  VDLLINYFVPTVTNKTYIFPPNLVGPGGITALHLAACMPDSEVMVDTLTNDPQEIGLHGW 363
            VDLLI+Y V + ++K YIFPPNLVG GGIT LHLAAC   S+ ++D LT+DPQEIGLH W
Sbjct: 879  VDLLIHYSVASSSSKKYIFPPNLVGAGGITPLHLAACTAGSDDIIDALTSDPQEIGLHSW 938

Query: 364  DSLLDENGLSPHAYAQMRNNDSYNELVARKLIDRNNGQVSVLVGNGIQEHLLNMGLRHPA 543
            +SLLD +G SP+AYA MRNN SYN LVARKL DR NGQVS+ + N +++    +G     
Sbjct: 939  NSLLDASGQSPYAYAMMRNNHSYNRLVARKLADRRNGQVSLSIENAMEQPWPKVGQEQ-- 996

Query: 544  SFQIGQRQKSCSKCAVVASRYIRKTSASQGLLHRPYIHSMLAIAAVCVCVCLFLRGA 714
                GQ + SC+KCAVVA++Y R+   SQGLLHRPYIHSMLAIAAVCVCVCLFLRG+
Sbjct: 997  --HFGQGRSSCAKCAVVAAKYSRRMPGSQGLLHRPYIHSMLAIAAVCVCVCLFLRGS 1051


>ref|XP_002307006.1| predicted protein [Populus trichocarpa] gi|222856455|gb|EEE94002.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  271 bits (693), Expect = 1e-70
 Identities = 142/239 (59%), Positives = 175/239 (73%), Gaps = 2/239 (0%)
 Frame = +1

Query: 4   RFKFLFNFSVENDLSAVVKTLLDILCDICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 183
           RF+FL  FSVE D   +VKT+LD+L +  +  DELS++SLEML E+ LL ++VKR  RKM
Sbjct: 96  RFRFLLIFSVERDYCVLVKTILDMLVERNMCRDELSKESLEMLSEVQLLNRSVKRSCRKM 155

Query: 184 VDLLINYFVPTVTN--KTYIFPPNLVGPGGITALHLAACMPDSEVMVDTLTNDPQEIGLH 357
           VDLLI+Y + +  N  +TYIFPPN+ GPGGIT LHL AC   S+ +VD LTNDP EIGL 
Sbjct: 156 VDLLIHYSIVSHDNSSRTYIFPPNVRGPGGITPLHLVACASGSDGLVDALTNDPHEIGLS 215

Query: 358 GWDSLLDENGLSPHAYAQMRNNDSYNELVARKLIDRNNGQVSVLVGNGIQEHLLNMGLRH 537
            W+SLLD NG SP+AYA M  N SYN LVARKL D+ N QVSV +GN I++  L     H
Sbjct: 216 CWNSLLDANGQSPYAYALMTKNHSYNLLVARKLADKINAQVSVTIGNEIEQPALEQ--EH 273

Query: 538 PASFQIGQRQKSCSKCAVVASRYIRKTSASQGLLHRPYIHSMLAIAAVCVCVCLFLRGA 714
            A  Q  Q +KSC+KCA+VA+++ ++   SQGLL RPY+HSMLAIAAVCVCVCLF RGA
Sbjct: 274 GAVSQFQQGRKSCAKCAIVAAKFHKRVPGSQGLLQRPYVHSMLAIAAVCVCVCLFFRGA 332


>ref|XP_002510746.1| Squamosa promoter-binding protein, putative [Ricinus communis]
            gi|223551447|gb|EEF52933.1| Squamosa promoter-binding
            protein, putative [Ricinus communis]
          Length = 1073

 Score =  268 bits (684), Expect = 1e-69
 Identities = 140/239 (58%), Positives = 178/239 (74%), Gaps = 2/239 (0%)
 Frame = +1

Query: 4    RFKFLFNFSVENDLSAVVKTLLDILCDICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 183
            RFKFL  FSVE D  A+VKT+LD+L +  +G   LS++ LEML EI+L+ +AVKR+ RKM
Sbjct: 821  RFKFLLIFSVERDYCALVKTILDMLVERNMGMSGLSKECLEMLSEIHLVNRAVKRQCRKM 880

Query: 184  VDLLINYFV--PTVTNKTYIFPPNLVGPGGITALHLAACMPDSEVMVDTLTNDPQEIGLH 357
            VDLLI+Y++    +++K+YIFPP+L GPGGIT LHLAAC   S+ +VD LTNDPQEIGL 
Sbjct: 881  VDLLIHYYINCSELSSKSYIFPPSLAGPGGITPLHLAACTSGSDDLVDALTNDPQEIGLS 940

Query: 358  GWDSLLDENGLSPHAYAQMRNNDSYNELVARKLIDRNNGQVSVLVGNGIQEHLLNMGLRH 537
             W+SL+D N  SP+ YA M +N SYN+LVA K  DR NGQVSV +GN I + L +  +  
Sbjct: 941  CWNSLVDANHQSPYDYATMTDNHSYNKLVAHKHADRRNGQVSVRIGNEIVQSLSSRMIS- 999

Query: 538  PASFQIGQRQKSCSKCAVVASRYIRKTSASQGLLHRPYIHSMLAIAAVCVCVCLFLRGA 714
                 + Q ++SC++CA VA++Y R+   SQGLL RPYIHSMLAIAAVCVCVCLFLRGA
Sbjct: 1000 ----DVEQERRSCARCATVAAKYNRRIMGSQGLLQRPYIHSMLAIAAVCVCVCLFLRGA 1054


>ref|XP_004145609.1| PREDICTED: squamosa promoter-binding-like protein 14-like [Cucumis
            sativus]
          Length = 1031

 Score =  267 bits (682), Expect = 2e-69
 Identities = 145/241 (60%), Positives = 174/241 (72%), Gaps = 4/241 (1%)
 Frame = +1

Query: 4    RFKFLFNFSVENDLSAVVKTLLDILCDICLGSDELSRKSLEMLLEINLLIKAVKRRSRKM 183
            RF+FL  FS E D  A+VKTLLDIL   CL +D LS KSLEM+ E+ LL ++VKRR R+M
Sbjct: 778  RFRFLLTFSAERDFCALVKTLLDILAKKCLITDGLSMKSLEMISELQLLNRSVKRRCRQM 837

Query: 184  VDLLINYFVPTV--TNKTYIFPPNLVGPGGITALHLAACMPDSEVMVDTLTNDPQEIGLH 357
            VDLL++Y V  V  + K Y+FPPN +GPGGIT LHLAA M D+E +VD LTNDP EIGL 
Sbjct: 838  VDLLVHYHVSGVGDSEKKYLFPPNFIGPGGITPLHLAASMADAENLVDALTNDPLEIGLE 897

Query: 358  GWDSLLDENGLSPHAYAQMRNNDSYNELVARKLIDRNNGQVSVLVGNGIQEHLLNMGLRH 537
             W S LDE+G SP AYA MR N + NELV RKL DR NGQVSV +GN I++  ++ G R 
Sbjct: 898  CWSSQLDESGRSPQAYALMRGNHNCNELVKRKLADRKNGQVSVRIGNEIEQLEVSSGERG 957

Query: 538  PASFQIGQRQKSCSKCAVVASRYIRKT--SASQGLLHRPYIHSMLAIAAVCVCVCLFLRG 711
                    + +SCS+CAVVA+R  R+   S +  LLHRPYIHSMLAIAAVCVCVCLFLRG
Sbjct: 958  RV------KGRSCSRCAVVAARCNRRVPGSGTHRLLHRPYIHSMLAIAAVCVCVCLFLRG 1011

Query: 712  A 714
            +
Sbjct: 1012 S 1012


Top