BLASTX nr result

ID: Bupleurum21_contig00003085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003085
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...   440   e-121
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]   427   e-117
ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|2...   419   e-115
ref|XP_002883706.1| integral membrane family protein [Arabidopsi...   392   e-106
ref|XP_002525329.1| Transmembrane protein, putative [Ricinus com...   390   e-106

>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
            gi|297739206|emb|CBI28857.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  440 bits (1131), Expect = e-121
 Identities = 225/380 (59%), Positives = 282/380 (74%), Gaps = 3/380 (0%)
 Frame = -3

Query: 1221 VELV---ARSGEEAAGDSKDDQITPLLIHSQKPKINIFSLSYPRPKSKREQITRLAETET 1051
            VEL+   A S + AA     ++I PLL  S+KPKINIFS+SY R K  REQ+T+ AE   
Sbjct: 14   VELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKP-REQVTKSAED-- 70

Query: 1050 SQFIQSITWVWGGSRYSGLMCVAISSFVYSMMEILSNLFSVQPIPLFEIAFMRCTVMAIV 871
            + F Q I W W GSR SGL+C+A+SS +Y +ME LS++FS Q IPLFE AF RCTV  I+
Sbjct: 71   ASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFTRCTVTLIL 130

Query: 870  SFVWLKKSGHPAFGPANARKLIVSRALVGYISLMSFIYCMQRLPLAHVIVLSFTTPIMAS 691
            S+ WL++SG P FGP + R L+VSRAL+GY+SL+SF+YC+QRLPL+  +VLSFTTPIMAS
Sbjct: 131  SYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLSFTTPIMAS 190

Query: 690  VAARIILHEKSKLSEIGGLAGSFSGMLFIFYSMLFTQGGVVKVGQESNPMVQGTYNPYXX 511
            + ARIILHEK  ++EIGGLA SF G+LFIF  +L  QGG+ K  + +N  V G+ + Y  
Sbjct: 191  IMARIILHEKLNIAEIGGLACSFIGVLFIFRPILAAQGGLPKAEEANNIYVGGSDHIYAV 250

Query: 510  XXXXXXXXXXXXSYCLIRAGAKASDQPVLTVFSFGVFASPSAAICTFAFQEFVMPGLYSF 331
                        SYCL RAGAKASDQPV+TVF+FG+  SP+AAICTFAFQ+FV+P  YSF
Sbjct: 251  LVGLVSSISGGISYCLTRAGAKASDQPVITVFAFGMLGSPAAAICTFAFQDFVLPSFYSF 310

Query: 330  ILMVIMGLLAFFAEIFLARGLQLEKTSKIANIQYLEAAFSQVWLMSSLRVVPSFGRVVGC 151
             LMVI+ +LAFFAE+FLARGLQLEKTSK  NIQY+EAA SQ+W + S ++ PSFGR+VGC
Sbjct: 311  FLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEAALSQLWGLGSSKIAPSFGRLVGC 370

Query: 150  LLILASACFTWFIGPEKEVE 91
             LI AS C T + GP+KE+E
Sbjct: 371  FLIFASTCCTMYFGPDKEME 390


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score =  427 bits (1097), Expect = e-117
 Identities = 225/403 (55%), Positives = 282/403 (69%), Gaps = 26/403 (6%)
 Frame = -3

Query: 1221 VELV---ARSGEEAAGDSKDDQITPLLIHSQKPKINIFSLSYPRPKSKREQITRLAETET 1051
            VEL+   A S + AA     ++I PLL  S+KPKINIFS+SY R K  REQ+T+ AE   
Sbjct: 14   VELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKP-REQVTKSAED-- 70

Query: 1050 SQFIQSITWVWGGSRYSGLMCVAISSFVYSMMEILSNLFSVQPIPLFEIAFMRCTVMAIV 871
            + F Q I W W GSR SGL+C+A+SS +Y +ME LS++FS Q IPLFE AF RCTV  I+
Sbjct: 71   ASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFTRCTVTLIL 130

Query: 870  SFVWLKKSGHPAFGPANARKLIVSRALVGYISLMSFIYCMQRLPLAHVIVLSFTTPIMAS 691
            S+ WL++SG P FGP + R L+VSRAL+GY+SL+SF+YC+QRLPL+  +VLSFTTPIMAS
Sbjct: 131  SYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLSFTTPIMAS 190

Query: 690  VAARIILHEKSKLSEIG-----------------------GLAGSFSGMLFIFYSMLFTQ 580
            + ARIILHEK  ++EIG                       GLA SF G+LFIF  +L  Q
Sbjct: 191  IMARIILHEKLNIAEIGELYTYFCEAGGETDCFVBCIYFPGLACSFIGVLFIFRPILAAQ 250

Query: 579  GGVVKVGQESNPMVQGTYNPYXXXXXXXXXXXXXXSYCLIRAGAKASDQPVLTVFSFGVF 400
            GG+ K  + +N  V G+ + Y              SYCL RAGAKASDQPV+TVF+FG+ 
Sbjct: 251  GGLPKAEEANNIYVGGSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQPVITVFAFGML 310

Query: 399  ASPSAAICTFAFQEFVMPGLYSFILMVIMGLLAFFAEIFLARGLQLEKTSKIANIQYLEA 220
             SP+AAICTFAFQ+FV+P  YSF LMVI+ +LAFFAE+FLARGLQLEKTSK  NIQY+EA
Sbjct: 311  GSPAAAICTFAFQDFVLPSFYSFFLMVILAVLAFFAEVFLARGLQLEKTSKATNIQYIEA 370

Query: 219  AFSQVWLMSSLRVVPSFGRVVGCLLILASACFTWFIGPEKEVE 91
            A SQ+W + S ++ PSFGR+VGC LI AS C T + GP+KE+E
Sbjct: 371  ALSQLWGLGSSKIAPSFGRLVGCFLIFASTCCTMYFGPDKEME 413


>ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  419 bits (1078), Expect = e-115
 Identities = 211/372 (56%), Positives = 275/372 (73%), Gaps = 3/372 (0%)
 Frame = -3

Query: 1197 EEAAGDSK---DDQITPLLIHSQKPKINIFSLSYPRPKSKREQITRLAETETSQFIQSIT 1027
            +E +GD      ++ITPLL    KPKINIFS+S+ R K  REQ T++ + ET    Q + 
Sbjct: 27   DEISGDGAVLASEEITPLL----KPKINIFSVSHSRRKP-REQGTKIPDIETFPVTQFVL 81

Query: 1026 WVWGGSRYSGLMCVAISSFVYSMMEILSNLFSVQPIPLFEIAFMRCTVMAIVSFVWLKKS 847
            W+WGGSRYSGL+CVAISS +Y +ME+LS+ FS Q IPLFE AF RCT+  I+S++WL+ +
Sbjct: 82   WIWGGSRYSGLLCVAISSTIYFVMEVLSDFFSAQSIPLFETAFARCTITLILSYLWLRGN 141

Query: 846  GHPAFGPANARKLIVSRALVGYISLMSFIYCMQRLPLAHVIVLSFTTPIMASVAARIILH 667
            G P FGPA+ARK + SRAL G +SL+SFIYC++RLPL+  IVLSFTTPIMAS+ ARIILH
Sbjct: 142  GQPIFGPAHARKFLFSRALTGCLSLLSFIYCIRRLPLSQAIVLSFTTPIMASIVARIILH 201

Query: 666  EKSKLSEIGGLAGSFSGMLFIFYSMLFTQGGVVKVGQESNPMVQGTYNPYXXXXXXXXXX 487
            EK K+ ++GGLA SF G+LFIF  +L TQG +++VG+ +   + G  +            
Sbjct: 202  EKLKIVDVGGLACSFFGVLFIFRQILTTQGALLRVGETNYIAIMGRNHVLTVLVALFSSI 261

Query: 486  XXXXSYCLIRAGAKASDQPVLTVFSFGVFASPSAAICTFAFQEFVMPGLYSFILMVIMGL 307
                SYCL++AGAKASDQP+ TVFSFG+ A+P+  +C FAF+EFV+P  Y+F LM+I+GL
Sbjct: 262  TGGISYCLVKAGAKASDQPLATVFSFGILATPATGMCAFAFEEFVLPNFYTFFLMLILGL 321

Query: 306  LAFFAEIFLARGLQLEKTSKIANIQYLEAAFSQVWLMSSLRVVPSFGRVVGCLLILASAC 127
            L+F AE+F ARGLQLEKTSK AN+ Y+E A SQ+W + S R+ PSFG +VGCLLIL S C
Sbjct: 322  LSFSAEVFFARGLQLEKTSKAANVLYMEVALSQLWGIGSWRITPSFGGLVGCLLILISVC 381

Query: 126  FTWFIGPEKEVE 91
             T +IGPEKE+E
Sbjct: 382  CTIYIGPEKEME 393


>ref|XP_002883706.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329546|gb|EFH59965.1| integral membrane family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 401

 Score =  392 bits (1006), Expect = e-106
 Identities = 202/380 (53%), Positives = 273/380 (71%), Gaps = 3/380 (0%)
 Frame = -3

Query: 1221 VELVARSGEEAAGDSKDDQITPLLIHSQKPKINIFSLSYPRPKSKREQITRLAETETSQF 1042
            +E  A     +A +S  D+I PLL  +Q+P+INIFS SY R K  REQ+ ++ ETE S  
Sbjct: 24   LESPALEDASSAPESSSDEIIPLLNQNQRPRINIFSASYTRHKP-REQVIKVTETEISPV 82

Query: 1041 IQSITWVWGGSRYSGLMCVAISSFVYSMMEILSNLFSVQPIPLFEIAFMRCTVMAIVSFV 862
             Q  +W+W GSRYSGL+C+ +SS +Y +ME++S+ FSVQPIPLFE AFMRCT++ I+S++
Sbjct: 83   TQFSSWIWSGSRYSGLLCMVLSSTLYLIMELVSDTFSVQPIPLFETAFMRCTIILILSYL 142

Query: 861  WLKKSGHPAFGPANARKLIVSRALVGYISLMSFIYCMQRLPLAHVIVLSFTTPIMASVAA 682
            WLK+ G P FGPA+ARKL+VSRALVGY+SL SFI+ +Q LPL+  IVLSF  PIMAS+AA
Sbjct: 143  WLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQMLPLSQAIVLSFLNPIMASIAA 202

Query: 681  RIILHEKSKLSEIGGLAGSFSGMLFIFYSMLFTQGGVVKVGQE-SNPMVQGTYNPYXXXX 505
            R+++HEK K+++IGGLA SF G+LFIF   L      V+VG E +N  ++G ++ Y    
Sbjct: 203  RVVMHEKLKITDIGGLACSFFGVLFIFGPTL-----TVQVGSEGTNENLKGNHHIYAFWL 257

Query: 504  XXXXXXXXXXSYCLIRAGAKASDQPVLTVFSFGVFASPSAAICTFAFQEFVMPGLYSFIL 325
                      +YCLI+A AKAS+QPV+TVFSFG+ A P+AAIC F+F+ FV+P   + I 
Sbjct: 258  GLFSSITGGITYCLIKAAAKASEQPVITVFSFGLVACPAAAICMFSFESFVLPAFDTLIT 317

Query: 324  MVIMGLLAFFAEIFLARGLQLEKTSKIANIQYLEAAFSQVWLMSSLRVVPS--FGRVVGC 151
            M+++GLLAF AE+ LARGLQLEK SK ANI Y+E   SQ+W++S+ +      F R+VGC
Sbjct: 318  MIVLGLLAFCAEVLLARGLQLEKISKAANILYIEVVLSQLWIVSTGKAGSPGLFSRLVGC 377

Query: 150  LLILASACFTWFIGPEKEVE 91
            LLIL S  +T ++GP K+ E
Sbjct: 378  LLILISVSYTVYMGPAKDTE 397


>ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis]
            gi|223535388|gb|EEF37062.1| Transmembrane protein,
            putative [Ricinus communis]
          Length = 425

 Score =  390 bits (1002), Expect = e-106
 Identities = 196/349 (56%), Positives = 259/349 (74%)
 Frame = -3

Query: 1179 SKDDQITPLLIHSQKPKINIFSLSYPRPKSKREQITRLAETETSQFIQSITWVWGGSRYS 1000
            S  D+ITPLL    KPKINIFS+S+ R K  REQ+ +L ETET  FIQ I WVW GSRYS
Sbjct: 44   SPSDEITPLL----KPKINIFSVSHSRRKP-REQVAKLPETETPPFIQLILWVWSGSRYS 98

Query: 999  GLMCVAISSFVYSMMEILSNLFSVQPIPLFEIAFMRCTVMAIVSFVWLKKSGHPAFGPAN 820
            G++C+A+SS +Y +MEILS+ FS + IPLFE AFMRCT++ I+S++WL++SG P FG  +
Sbjct: 99   GILCMALSSSIYFVMEILSHSFSTRSIPLFETAFMRCTIVLILSYIWLRRSGQPIFGAVH 158

Query: 819  ARKLIVSRALVGYISLMSFIYCMQRLPLAHVIVLSFTTPIMASVAARIILHEKSKLSEIG 640
            ARKL+  RAL G++SL+SFIYC+QRLP +  I+L+FTTPI+AS+ AR++LHEK K+++IG
Sbjct: 159  ARKLLFLRALTGFLSLLSFIYCIQRLPFSQAIILNFTTPIVASILARLMLHEKLKIADIG 218

Query: 639  GLAGSFSGMLFIFYSMLFTQGGVVKVGQESNPMVQGTYNPYXXXXXXXXXXXXXXSYCLI 460
            GL  SF G+LFI+  +L TQ      G+ +N    G+++ Y              SYC I
Sbjct: 219  GLTCSFFGVLFIYRQILRTQ-----AGEANNTSASGSHHVYAVLAGLLSLITGGISYCFI 273

Query: 459  RAGAKASDQPVLTVFSFGVFASPSAAICTFAFQEFVMPGLYSFILMVIMGLLAFFAEIFL 280
            +AGAKASDQPV+TVFSFG+ +SP+A IC FAF+EFV+P   SF+LM+I+G+LAF  E+ L
Sbjct: 274  KAGAKASDQPVVTVFSFGLLSSPAAGICAFAFEEFVVPDFCSFLLMLILGVLAFIVEVLL 333

Query: 279  ARGLQLEKTSKIANIQYLEAAFSQVWLMSSLRVVPSFGRVVGCLLILAS 133
            ARGLQLEK SK  N+QY+EAA SQ+W + S R+  SF  +VGCLLI+ S
Sbjct: 334  ARGLQLEKISKATNVQYIEAALSQLWGIDSSRISSSFAGLVGCLLIIIS 382


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