BLASTX nr result

ID: Bupleurum21_contig00003024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003024
         (2183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus comm...   526   e-147
ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic...   520   e-145
ref|XP_002871920.1| hypothetical protein ARALYDRAFT_488907 [Arab...   507   e-141
ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|2...   506   e-140
ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|2...   506   e-140

>ref|XP_002524460.1| mutt/nudix hydrolase, putative [Ricinus communis]
            gi|223536248|gb|EEF37900.1| mutt/nudix hydrolase,
            putative [Ricinus communis]
          Length = 400

 Score =  526 bits (1356), Expect = e-147
 Identities = 262/373 (70%), Positives = 300/373 (80%), Gaps = 8/373 (2%)
 Frame = +3

Query: 984  VIGELRESTDPVSPSSAFQTLKA-YLSDQTHN-PSPNFKVLPFRKGKPLVGC------DS 1139
            ++ +  + TDP+SP+ A +TLK+ +L   +H   S NFKVLPFRKG+PL         D 
Sbjct: 15   LLSKTLKPTDPLSPNLALETLKSQFLDGNSHQLSSVNFKVLPFRKGRPLASSSIGDNDDL 74

Query: 1140 EPKWHLAWLSLNDCMVFLENSQVKVTEYSLVYLGSKDCDDDVVYWAIDVSDASDLENELS 1319
             P WHL W+SL DC   L+NS V+++  SLVYLGSK  +DDVVYWA+DVS    L  E  
Sbjct: 75   VPNWHLGWISLADCKTLLDNSGVELSGESLVYLGSKS-EDDVVYWAVDVSGEGSLVTEFG 133

Query: 1320 NLQCSFVDVMSLMVATDWANQIVMADLAIAGQARALLEWHIRSRFCGNCGEKTVPIDAGR 1499
            + Q  FV++ +LMVATDWAN+  M+DLAIAG ARALLEWH  S FCG CGEKTVP +AGR
Sbjct: 134  SKQFCFVELRTLMVATDWANERAMSDLAIAGHARALLEWHKISNFCGQCGEKTVPKEAGR 193

Query: 1500 RKQCSDESCKKRIYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLE 1679
            RKQCS+E CKKRIYPRVDPVVIMLVID++ND  LLSRQSR+VPRMWSCLAGFIEPGESLE
Sbjct: 194  RKQCSNELCKKRIYPRVDPVVIMLVIDRENDCVLLSRQSRYVPRMWSCLAGFIEPGESLE 253

Query: 1680 EAVRRETLEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFVAYAKSFEINVDKKELEDA 1859
            EAVRRET EETGIEVGEV+YHSSQPWPVGPSSMPCQLMVGF AYAKS EINVDK ELEDA
Sbjct: 254  EAVRRETWEETGIEVGEVVYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEINVDKAELEDA 313

Query: 1860 QWFSREDVKKALTFAEYEKAQKTTATKVDQMSKGVEKNFNLSLDFNMESGELAPMFIPGP 2039
            +W SREDV+KAL FAEY+KAQ+T A KVDQM KGVEK  N S DFN+ESGELAPMF PGP
Sbjct: 314  KWHSREDVQKALAFAEYDKAQRTAAAKVDQMCKGVEKGQNFSADFNVESGELAPMFFPGP 373

Query: 2040 YAVAHHLVSSWVN 2078
            +A+AHHL+SSWVN
Sbjct: 374  FAIAHHLISSWVN 386


>ref|XP_002285069.1| PREDICTED: nudix hydrolase 19, chloroplastic-like [Vitis vinifera]
          Length = 441

 Score =  520 bits (1338), Expect = e-145
 Identities = 270/405 (66%), Positives = 309/405 (76%), Gaps = 7/405 (1%)
 Frame = +3

Query: 891  KNRPHLHRLITG*LN-QPFDDRPLRFESKKAFVIGELRESTDPVSPSSAFQTLKAYLSDQ 1067
            K   HLH  ++  L    F   PLR  + K   +          SP SAF+TLK+ L + 
Sbjct: 28   KTLSHLHSTMSTNLKTHAFAGNPLRSTTPKPESL---------FSPISAFETLKSRLLEN 78

Query: 1068 THNPS-PNFKVLPFRKGKPLVGC-----DSEPKWHLAWLSLNDCMVFLENSQVKVTEYSL 1229
               PS P FKVLPFRKG+PL        DS P WHL W +L D   FL NS+ + TE S 
Sbjct: 79   ALLPSSPIFKVLPFRKGRPLAISTRPTGDSPPIWHLGWFNLGDFKGFLANSEFQPTENSF 138

Query: 1230 VYLGSKDCDDDVVYWAIDVSDASDLENELSNLQCSFVDVMSLMVATDWANQIVMADLAIA 1409
            VYLGS+  +DDVVYW IDVS+ S L  +       FV++ +LMVATDW ++  M+DLAIA
Sbjct: 139  VYLGSRS-EDDVVYWGIDVSEDSSLVPQFGAKHFGFVELRTLMVATDWTDERAMSDLAIA 197

Query: 1410 GQARALLEWHIRSRFCGNCGEKTVPIDAGRRKQCSDESCKKRIYPRVDPVVIMLVIDKQN 1589
            G ARALLEWH  S FCG+CGEKTVP++AGRRKQCS+  CKKRIYPRVDPVVIMLVID++N
Sbjct: 198  GHARALLEWHNISHFCGHCGEKTVPMEAGRRKQCSNALCKKRIYPRVDPVVIMLVIDREN 257

Query: 1590 DRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETLEETGIEVGEVIYHSSQPWPVGP 1769
            DRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRET EETG+EVGEVIYHSSQPWPVGP
Sbjct: 258  DRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGVEVGEVIYHSSQPWPVGP 317

Query: 1770 SSMPCQLMVGFVAYAKSFEINVDKKELEDAQWFSREDVKKALTFAEYEKAQKTTATKVDQ 1949
            +SMPCQLM+GF AYAKS EINVDK+ELEDAQW SREDVKKALTFAEY+KAQ+T A KV+Q
Sbjct: 318  NSMPCQLMMGFFAYAKSVEINVDKEELEDAQWHSREDVKKALTFAEYKKAQRTAAAKVEQ 377

Query: 1950 MSKGVEKNFNLSLDFNMESGELAPMFIPGPYAVAHHLVSSWVNDI 2084
            M KGVEK  NLS DFN+ESGELA MFIPGP+A+AHHL+SSWVN +
Sbjct: 378  MCKGVEKGQNLSADFNVESGELATMFIPGPFAIAHHLISSWVNQV 422


>ref|XP_002871920.1| hypothetical protein ARALYDRAFT_488907 [Arabidopsis lyrata subsp.
            lyrata] gi|297317757|gb|EFH48179.1| hypothetical protein
            ARALYDRAFT_488907 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score =  507 bits (1305), Expect = e-141
 Identities = 247/370 (66%), Positives = 303/370 (81%), Gaps = 7/370 (1%)
 Frame = +3

Query: 1002 ESTDPVSPSSAFQTLKAYLS--DQTHNPSPNFKVLPFRKGKPLV-----GCDSEPKWHLA 1160
            +STDP SP+SAF++LK  +        PSP+FKVLPF KG+PLV       ++ P WHL 
Sbjct: 56   KSTDPFSPTSAFESLKTLIPVIPNHSTPSPDFKVLPFSKGRPLVFSSGGDANTTPIWHLG 115

Query: 1161 WLSLNDCMVFLENSQVKVTEYSLVYLGSKDCDDDVVYWAIDVSDASDLENELSNLQCSFV 1340
            W+SL DC V L +  V + E SLVYLG K+ ++D+VYWA+D+++     +EL   +  FV
Sbjct: 116  WVSLADCKVLLASCGVDLNEESLVYLGPKE-EEDLVYWAVDLAE-DGFVSELGGRKLCFV 173

Query: 1341 DVMSLMVATDWANQIVMADLAIAGQARALLEWHIRSRFCGNCGEKTVPIDAGRRKQCSDE 1520
            ++ +LMVA DWA+Q  M +LAIAG ARALLEWHI S+FCG+CG KTVP +AGRRKQCS+E
Sbjct: 174  ELRTLMVAADWADQRAMDELAIAGNARALLEWHIASQFCGSCGGKTVPKEAGRRKQCSNE 233

Query: 1521 SCKKRIYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRET 1700
            +C+KR+YPRVDPVVIMLVID++NDRALLSRQSR+VPRMWSCLAGFIEPGESLEEAVRRET
Sbjct: 234  TCRKRVYPRVDPVVIMLVIDRENDRALLSRQSRYVPRMWSCLAGFIEPGESLEEAVRRET 293

Query: 1701 LEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFVAYAKSFEINVDKKELEDAQWFSRED 1880
             EETGIEVGEV+YHSSQPWPVGPSSMPCQLM+GF A+AK+ +INVDK+ELEDAQW SRE+
Sbjct: 294  WEETGIEVGEVVYHSSQPWPVGPSSMPCQLMLGFFAFAKTLDINVDKEELEDAQWHSREE 353

Query: 1881 VKKALTFAEYEKAQKTTATKVDQMSKGVEKNFNLSLDFNMESGELAPMFIPGPYAVAHHL 2060
            VKKAL  AEY KAQ+T A KV+Q+ KGVE++ +LS DFN+ESGELAPMFIPGP+A+AHHL
Sbjct: 354  VKKALAVAEYRKAQRTAAAKVEQICKGVERSQSLSTDFNLESGELAPMFIPGPFAIAHHL 413

Query: 2061 VSSWVNDIQG 2090
            +S+WV+   G
Sbjct: 414  ISAWVDQAPG 423


>ref|XP_002330502.1| predicted protein [Populus trichocarpa] gi|222872436|gb|EEF09567.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  506 bits (1302), Expect = e-140
 Identities = 251/385 (65%), Positives = 301/385 (78%), Gaps = 6/385 (1%)
 Frame = +3

Query: 942  FDDRPLRFESKKAFVIGELRESTDPVSPSSAFQTLKAYLSDQTHNPSP-NFKVLPFRKGK 1118
            F   PLR ++ K         STDP+SP  AF+TLK  L   TH  S  NFKVLPFRKG+
Sbjct: 10   FAGNPLRSKTPK---------STDPLSPPLAFETLKTQLLGNTHQLSSLNFKVLPFRKGR 60

Query: 1119 PLVGCDSE-----PKWHLAWLSLNDCMVFLENSQVKVTEYSLVYLGSKDCDDDVVYWAID 1283
            PL    S      PKWHL W+SL+DC      S  +++  ++VYLGS+  ++DVVYWAI+
Sbjct: 61   PLASSSSTDGDLGPKWHLGWISLDDCKGLFSGSGDELSGDNMVYLGSRS-EEDVVYWAIN 119

Query: 1284 VSDASDLENELSNLQCSFVDVMSLMVATDWANQIVMADLAIAGQARALLEWHIRSRFCGN 1463
            VS  + L  +  + Q  FV++ +LMVATDWA++  M+DLA+AG A+ALLEWH  SRFCG 
Sbjct: 120  VSGENSLVTDSVSKQFCFVELRTLMVATDWADERAMSDLAVAGHAKALLEWHNISRFCGY 179

Query: 1464 CGEKTVPIDAGRRKQCSDESCKKRIYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSC 1643
            CGEKT+ +++GRRKQCS+E C+++IYPRVDPVVIMLVID++NDR LL RQSRFVPRMWSC
Sbjct: 180  CGEKTITMESGRRKQCSNELCRRKIYPRVDPVVIMLVIDRENDRVLLGRQSRFVPRMWSC 239

Query: 1644 LAGFIEPGESLEEAVRRETLEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFVAYAKSF 1823
            LAGFIEPGESLEEAVRRET EET IEVGEV+YHSSQPWPVGPSSMPCQLMVGF AYAKSF
Sbjct: 240  LAGFIEPGESLEEAVRRETWEETAIEVGEVMYHSSQPWPVGPSSMPCQLMVGFFAYAKSF 299

Query: 1824 EINVDKKELEDAQWFSREDVKKALTFAEYEKAQKTTATKVDQMSKGVEKNFNLSLDFNME 2003
            EINVDK+ELEDAQW SREDV+KAL  AEY+KAQ+T A KV+QM KG+E+  + S DFN+E
Sbjct: 300  EINVDKEELEDAQWHSREDVRKALLCAEYKKAQRTAAAKVEQMCKGIERGQSFSSDFNLE 359

Query: 2004 SGELAPMFIPGPYAVAHHLVSSWVN 2078
            SGELAPMF PGPYA+AHHL++SW N
Sbjct: 360  SGELAPMFFPGPYAIAHHLITSWAN 384


>ref|XP_002308309.1| predicted protein [Populus trichocarpa] gi|222854285|gb|EEE91832.1|
            predicted protein [Populus trichocarpa]
          Length = 395

 Score =  506 bits (1302), Expect = e-140
 Identities = 251/366 (68%), Positives = 289/366 (78%), Gaps = 7/366 (1%)
 Frame = +3

Query: 1002 ESTDPVSPSSAFQTLKAYLSDQTHNPSP-NFKVLPFRKGKPLVG-----CDSEPKWHLAW 1163
            + T P+SP+ A +TLK  L D +H  S  NFKVLPFRKG+PL        D  P WHL W
Sbjct: 21   QPTHPLSPALALETLKTQLVDNSHQSSSLNFKVLPFRKGRPLASSTSTDADLGPTWHLGW 80

Query: 1164 LSLNDCMVFLENSQVKVTEYSLVYLGSKDCDD-DVVYWAIDVSDASDLENELSNLQCSFV 1340
            +SL DC      S V+ T  SL YLGS    D DVVYWAIDVS  + L  E  + Q  F+
Sbjct: 81   ISLADCKGLFSASGVEFTGDSLFYLGSSSEQDVDVVYWAIDVSGENSLFTEFDSEQVCFI 140

Query: 1341 DVMSLMVATDWANQIVMADLAIAGQARALLEWHIRSRFCGNCGEKTVPIDAGRRKQCSDE 1520
            ++ +LMVATDWA++  M DLA+AG A+ALLEWH  SRFCG CGEKTVP+++GRRKQCS+E
Sbjct: 141  ELRTLMVATDWADKQAMVDLAVAGHAKALLEWHNISRFCGYCGEKTVPMESGRRKQCSNE 200

Query: 1521 SCKKRIYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRET 1700
             C++++YPRVDPVVIMLVID++NDRALL RQSRFVPRMWSCLAGFIEPGESLEEAVRRET
Sbjct: 201  LCRRKVYPRVDPVVIMLVIDRENDRALLGRQSRFVPRMWSCLAGFIEPGESLEEAVRRET 260

Query: 1701 LEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFVAYAKSFEINVDKKELEDAQWFSRED 1880
             EET IEVGEV+YHSSQPWPVGPSSMPCQLMVGF AYAKS EI VDK ELEDAQW SRED
Sbjct: 261  WEETAIEVGEVMYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEIKVDKAELEDAQWHSRED 320

Query: 1881 VKKALTFAEYEKAQKTTATKVDQMSKGVEKNFNLSLDFNMESGELAPMFIPGPYAVAHHL 2060
            V+KAL FAEYEKAQ+T A KVDQM +GVEK  +LS DFN+ESGELAPMF PGP+A+AH L
Sbjct: 321  VRKALMFAEYEKAQRTAAAKVDQMCRGVEKGQSLSSDFNVESGELAPMFFPGPFAIAHRL 380

Query: 2061 VSSWVN 2078
            ++SWVN
Sbjct: 381  ITSWVN 386


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