BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002619
         (3836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1654   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1640   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1587   0.0  
ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|2...  1583   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1565   0.0  

>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 805/1159 (69%), Positives = 952/1159 (82%), Gaps = 2/1159 (0%)
 Frame = +1

Query: 133  FLNKLCKKAATSFFEQYGLISHQLNSYNDFIKHGLQNVFDSIGVITVEPGYDPSKKGDGE 312
            +L   CKK A SFF +YGLI HQ+NS+NDFIK+G+Q VFDS G I VEPGYDPSK+G+G+
Sbjct: 45   YLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGD 104

Query: 313  WRYASLEFGKVSLTPPVLYTGNFSEENSGVLDLYPRHARLQNMTYSSKMKVGVHLQVYTQ 492
            WRYAS+ FGKV+L  P ++ G    + S  L+  PRHARLQNMTYSS+MK  VH QVYTQ
Sbjct: 105  WRYASVRFGKVTLERPRVWAGESDGKES--LNFLPRHARLQNMTYSSRMKAQVHFQVYTQ 162

Query: 493  KMVRSDKFKTGKE-QFVDKEVCKDIREEITIGLLPVMVKSDLCRMSKAEKGDCDFDHGGY 669
            K+VRSDK+KTGK+ ++V+K+V  +   +I IG +PVMVKS+LC M+  E+GDC++DHGGY
Sbjct: 163  KLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGY 222

Query: 670  FIIKGAEKTFVAQEQICLKRLWLASKPTWVASYRHAMKRKRVYVRLEDPDKNDIGGGEKV 849
            F+IKGAEKTF+AQEQICLKRLW++S PTW+ +YR   KRKRVYV+LE P   +  GGEKV
Sbjct: 223  FLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKV 282

Query: 850  LEVYFFGVQIPVWTLFFALGVSSDKEVVDMIDADYEDGRIVNLLIASIYHADEKCDEECH 1029
            L VYF   +IP+W LFFALG SSDKEVVD+ID + +D  I N+L+ASI+ AD + +++  
Sbjct: 283  LTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKK-G 341

Query: 1030 EKFRRKGMAFKYVEKKLQSCPFPPSESTEDCINKYLFSSLGGFKRKARFLAFMVKCLLQA 1209
              FRR+G A  +V+K ++SC FPP ES ++CI+KYLF +  G K+KARFL +MVKCLLQA
Sbjct: 342  MYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQA 401

Query: 1210 YTGRRKVDNRDDFRNKXXXXXXXXXXXXXKVHMKHAEKRMVKAMQKDLYGDK-LEHIEKY 1386
            YTGRRK DNRDDFRNK             +VH++HAE+RMVKAMQ++LYGD+ L  IE Y
Sbjct: 402  YTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENY 461

Query: 1387 MDSSIITNGLSRAFSTGAWSHPYTRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTGR 1566
            +D+SIITNGLSRAFSTG WSHP+ R ER SGVVA L RTNPLQM A+MR+TRQ V YTG+
Sbjct: 462  LDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGK 521

Query: 1567 VGDARYPHPSHWGRLCFLSTPDGENCGLIKNLASTGLVSTTVYESILDKLLDCGMEDLVD 1746
            VGDARYPHPSHWG++CFLSTPDGENCGL+KNLA TGLVST V + ++DKL DCGME LVD
Sbjct: 522  VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVD 581

Query: 1747 DTWTCLRGKDNIFVDGELVGICRDPASFVAELRNLRRSKELPHQVEIKRDAKNREVRIFC 1926
            DT T L GK+ +F+DG+ VG+C DP SFV ELR  RR KELP QVEIKRD +  EVRIF 
Sbjct: 582  DTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFS 641

Query: 1927 DAGRILRPLLVVSNLRKVKLFKGGNYSFQSLLDAXXXXXXXXXXXXDCCTAWGIRYLMME 2106
            DAGRILRPLLVV NL+KVK FKG +++FQSLLD             DC TAWGI+YL ++
Sbjct: 642  DAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL-LK 700

Query: 2107 SSVDAPKKYTHCELDMSFLLGLSAGLTPFTNHDHARRALYQSQKHSHQAIGFSTTNPTIR 2286
               D P KYTHCELDMSFLLGLS G+ P+ NHDHARR LYQS+KHS QAIGFSTTNP IR
Sbjct: 701  GHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 760

Query: 2287 VDTGINQLYYPQKPLFRTMLAECLGVSEYHTDNNSKMLPKPEFYNGQCAIVAVNVHLGYN 2466
            VDT  +QLYYPQ+PLFRTM+++CLG   Y ++ +  ++P+PE++NGQ AIVAVNVHLGYN
Sbjct: 761  VDTLSHQLYYPQRPLFRTMISDCLGKPGY-SEGHKGIVPRPEYFNGQIAIVAVNVHLGYN 819

Query: 2467 QEDSLVMNRSSLERGMFRSEHIRSYKADVDSQEVAGKKHKLEEIIKFGKIPSKIGRVDSL 2646
            QEDSLVMNR+SLERGMFRSEHIRSYK++VD+ E   KK K E+ + FGK+ SKIGRVDSL
Sbjct: 820  QEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSL 879

Query: 2647 EDDGFPFVGANLQTGDIVIGKHAESGTDQSVKLKHTEKGMVQKVVLSSNDEDKNFAVVSL 2826
            +DDGFPF+GANLQ GDIVIG+ AESG D S+KLKHTE+GMVQKVV+S+ND+ KNFAVVSL
Sbjct: 880  DDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSL 939

Query: 2827 RQVRSPSLGDKFSSMHGQKGVLGYLDSQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXX 3006
            RQVR+P LGDKFSSMHGQKGVLG+L+SQENFPFT QGIVPDIVINPHAFPSRQTPGQ   
Sbjct: 940  RQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLE 999

Query: 3007 XXXXXXXXXXXXXRYATPFSSVSVDAITDQLHRAGFSRWGNERVYNGRTGEMIRSLVFMG 3186
                         R+ATPFS++SVDAI DQLHRAGFSRWG+ERVYNGRTGEM+RSL+FMG
Sbjct: 1000 AALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMG 1059

Query: 3187 PTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLH 3366
            PT YQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLH
Sbjct: 1060 PTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLH 1119

Query: 3367 ERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVRVSVPYGAKL 3546
            ERLFTLSD + MHICR+CK+ +NVIQR+V GGRK+RGPYCRYC+SSE+IV+V+VPYGAKL
Sbjct: 1120 ERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKL 1179

Query: 3547 LSQELFSMGISLKFETKLC 3603
            L QELFSMGISLKFET+LC
Sbjct: 1180 LCQELFSMGISLKFETQLC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1640 bits (4248), Expect = 0.0
 Identities = 802/1159 (69%), Positives = 944/1159 (81%), Gaps = 2/1159 (0%)
 Frame = +1

Query: 133  FLNKLCKKAATSFFEQYGLISHQLNSYNDFIKHGLQNVFDSIGVITVEPGYDPSKKGDGE 312
            +L   CKK A SFF +YGLI HQ+NS+NDFIK+G+Q VFDS G I VEPGYDPSK+G+G+
Sbjct: 81   YLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGD 140

Query: 313  WRYASLEFGKVSLTPPVLYTGNFSEENSGVLDLYPRHARLQNMTYSSKMKVGVHLQVYTQ 492
            WRYAS+ FGKV+L  P ++ G    + S  L+  PRHARLQNMTYSS+MK  VH QVYTQ
Sbjct: 141  WRYASVRFGKVTLERPRVWAGESDGKES--LNFLPRHARLQNMTYSSRMKAQVHFQVYTQ 198

Query: 493  KMVRSDKFKTGKE-QFVDKEVCKDIREEITIGLLPVMVKSDLCRMSKAEKGDCDFDHGGY 669
            K+VRSDK+KTGK+ ++V+K+V  +   +I IG +PVMVKS+LC M+  E+GDC++DHGGY
Sbjct: 199  KLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGY 258

Query: 670  FIIKGAEKTFVAQEQICLKRLWLASKPTWVASYRHAMKRKRVYVRLEDPDKNDIGGGEKV 849
            F+IKGAEKTF+AQEQICLKRLW++S PTW+ +YR   KRKRVYV+LE P   +  GGEKV
Sbjct: 259  FLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKV 318

Query: 850  LEVYFFGVQIPVWTLFFALGVSSDKEVVDMIDADYEDGRIVNLLIASIYHADEKCDEECH 1029
            L VYF   +IP+W LFFALG SSDKEVVD+ID + +D  I N+L+ASI+ AD + +++  
Sbjct: 319  LTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKK-G 377

Query: 1030 EKFRRKGMAFKYVEKKLQSCPFPPSESTEDCINKYLFSSLGGFKRKARFLAFMVKCLLQA 1209
              FRR+G A  +V+K ++SC FPP ES ++CI+KYLF +  G K+KARFL +MVKCLLQA
Sbjct: 378  MYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQA 437

Query: 1210 YTGRRKVDNRDDFRNKXXXXXXXXXXXXXKVHMKHAEKRMVKAMQKDLYGDK-LEHIEKY 1386
            YTGRRK DNRDDFRNK             +VH++HAE+RMVKAMQ++LYGD+ L  IE Y
Sbjct: 438  YTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENY 497

Query: 1387 MDSSIITNGLSRAFSTGAWSHPYTRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTGR 1566
            +D+SIITNGLSRAFSTG WSHP+ R ER SGVVA L RTNPLQM A+MR+TRQ V YTG+
Sbjct: 498  LDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKTRQQVQYTGK 557

Query: 1567 VGDARYPHPSHWGRLCFLSTPDGENCGLIKNLASTGLVSTTVYESILDKLLDCGMEDLVD 1746
            VGDARYPHPSHWG++CFLSTPDGENCGL+KNLA TGLVST V + ++DKL DCGME LVD
Sbjct: 558  VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVD 617

Query: 1747 DTWTCLRGKDNIFVDGELVGICRDPASFVAELRNLRRSKELPHQVEIKRDAKNREVRIFC 1926
            DT T L GK+ +F+DG+ VG+C DP SFV ELR  RR KELP QVEIKRD +  EVRIF 
Sbjct: 618  DTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFS 677

Query: 1927 DAGRILRPLLVVSNLRKVKLFKGGNYSFQSLLDAXXXXXXXXXXXXDCCTAWGIRYLMME 2106
            DAGRILRPLLVV NL+KVK FKG +++FQSLLD             DC TAWGI+YL ++
Sbjct: 678  DAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYL-LK 736

Query: 2107 SSVDAPKKYTHCELDMSFLLGLSAGLTPFTNHDHARRALYQSQKHSHQAIGFSTTNPTIR 2286
               D P KYTHCELDMSFLLGLS G+ P+ NHDHARR LYQS+KHS QAIGFSTTNP IR
Sbjct: 737  GHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIR 796

Query: 2287 VDTGINQLYYPQKPLFRTMLAECLGVSEYHTDNNSKMLPKPEFYNGQCAIVAVNVHLGYN 2466
            VDT  +QLYYPQ+PLFRTM+++               LP+PE++NGQ AIVAVNVHLGYN
Sbjct: 797  VDTLSHQLYYPQRPLFRTMISD---------------LPRPEYFNGQIAIVAVNVHLGYN 841

Query: 2467 QEDSLVMNRSSLERGMFRSEHIRSYKADVDSQEVAGKKHKLEEIIKFGKIPSKIGRVDSL 2646
            QEDSLVMNR+SLERGMFRSEHIRSYK++VD+ E   KK K E+ + FGK+ SKIGRVDSL
Sbjct: 842  QEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKIGRVDSL 901

Query: 2647 EDDGFPFVGANLQTGDIVIGKHAESGTDQSVKLKHTEKGMVQKVVLSSNDEDKNFAVVSL 2826
            +DDGFPF+GANLQ GDIVIG+ AESG D S+KLKHTE+GMVQKVV+S+ND+ KNFAVVSL
Sbjct: 902  DDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSL 961

Query: 2827 RQVRSPSLGDKFSSMHGQKGVLGYLDSQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXX 3006
            RQVR+P LGDKFSSMHGQKGVLG+L+SQENFPFT QGIVPDIVINPHAFPSRQTPGQ   
Sbjct: 962  RQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLE 1021

Query: 3007 XXXXXXXXXXXXXRYATPFSSVSVDAITDQLHRAGFSRWGNERVYNGRTGEMIRSLVFMG 3186
                         R+ATPFS++SVDAI DQLHRAGFSRWG+ERVYNGRTGEM+RSL+FMG
Sbjct: 1022 AALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMG 1081

Query: 3187 PTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLH 3366
            PT YQRLIHMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEMERDCLIAHGA+ANLH
Sbjct: 1082 PTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLH 1141

Query: 3367 ERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVRVSVPYGAKL 3546
            ERLFTLSD + MHICR+CK+ +NVIQR+V GGRK+RGPYCRYC+SSE+IV+V+VPYGAKL
Sbjct: 1142 ERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNVPYGAKL 1201

Query: 3547 LSQELFSMGISLKFETKLC 3603
            L QELFSMGISLKFET+LC
Sbjct: 1202 LCQELFSMGISLKFETQLC 1220


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1587 bits (4109), Expect = 0.0
 Identities = 793/1162 (68%), Positives = 925/1162 (79%), Gaps = 4/1162 (0%)
 Frame = +1

Query: 130  AFLNKLCKKAATSFFEQYGLISHQLNSYNDFIKHGLQNVFDSIGVITVEPGYDPSKKGDG 309
            A L   C KAAT FF +YGLISHQ+NSYNDFI +G+Q  FDS G + VEPGYDPSKKG+ 
Sbjct: 57   AKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGEN 116

Query: 310  EWRYASLEFGKVSLTPPVLYTGNFSEENSGVLDLYPRHARLQNMTYSSKMKVGVHLQVYT 489
            EWRYAS++FGKV+L  P  ++G  ++E+     + PRHARLQNMTYSSKMKV V ++VYT
Sbjct: 117  EWRYASVKFGKVALEKPTFWSG--ADEHK----MLPRHARLQNMTYSSKMKVNVSVEVYT 170

Query: 490  QKMVRSDKFKTGKEQFVDKEVCKDIREEITIGLLPVMVKSDLCRMSKAEKGDCDFDHGGY 669
            +K+VRSDKFKTGK+Q+VDKEV       ITIG LPVMVKSDLC M  AEKGDCDFDHGGY
Sbjct: 171  RKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGY 230

Query: 670  FIIKGAEKTFVAQEQICLKRLWLASKPTWVASYRHAMKRKRVYVRLEDPDK-NDIGGGEK 846
            F+IKGAEK F+AQEQICLKRLW+++   W  SY+  +KR R+ VRL       D+   +K
Sbjct: 231  FLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKK 290

Query: 847  VLEVYFFGVQIPVWTLFFALGVSSDKEVVDMIDADYEDGRIVNLLIASIYHADEKCDEEC 1026
             L VYF   +IP+W LFFALGV+SDKEV+D+I     D RIVN+  ASI+ ADEK     
Sbjct: 291  CLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKT---- 346

Query: 1027 HEKFRRKGMAFKYVEKKLQSCPFPPSESTEDCINKYLFSSLGGFKRKARFLAFMVKCLLQ 1206
             E FRR   A +YV ++++   FPP E+ ED    YLF +L   ++KARFL +MVKCLLQ
Sbjct: 347  -EGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQ 404

Query: 1207 AYTGRRKVDNRDDFRNKXXXXXXXXXXXXXKVHMKHAEKRMVKAMQKDLYGDK-LEHIEK 1383
            AY G+RK +N D FRNK             KVH+ HA +RM KA+QKDLYGD+ +  IE 
Sbjct: 405  AYNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEH 464

Query: 1384 YMDSSIITNGLSRAFSTGAWSHPYTRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTG 1563
            Y+D+SI+TNGLSRAFSTGAWSHPY R ER SGVVANLGR NPLQ + ++R+TR HV YTG
Sbjct: 465  YLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTG 524

Query: 1564 RVGDARYPHPSHWGRLCFLSTPDGENCGLIKNLASTGLVSTTVYESILDKLLDCGMEDLV 1743
            +VGDAR+PHPSHWGR+CFLSTPDGENCGL+KNLA+TGLVS  + E ++DKL+  GME + 
Sbjct: 525  KVGDARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVP 584

Query: 1744 DDTWTCLRGKDNIFVDGELVGICRDPASFVAELRNLRRSKELPHQVEIKRDAKNREVRIF 1923
            +D+ + L  KD +F++GE VG+C D   FVAELR LRR K+LP QVEIKRD + +EVRIF
Sbjct: 585  EDSHSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIF 644

Query: 1924 CDAGRILRPLLVVSNLRKVKLFKGGNYSFQSLLDAXXXXXXXXXXXXDCCTAWGIRYLMM 2103
             DAGRILRPLLVV NL K++ FKGGN +FQSLLD             DC TAWGI++L+ 
Sbjct: 645  SDAGRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLL- 703

Query: 2104 ESSVDAPK--KYTHCELDMSFLLGLSAGLTPFTNHDHARRALYQSQKHSHQAIGFSTTNP 2277
             S VD  +  KYTHCELDMSFLLGLS G+ PF NHDHARR LYQ+QKHS QAIGF TTNP
Sbjct: 704  -SGVDGKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNP 762

Query: 2278 TIRVDTGINQLYYPQKPLFRTMLAECLGVSEYHTDNNSKMLPKPEFYNGQCAIVAVNVHL 2457
             IRVDT  +QLYYPQ+PLFRT+ ++CLG     T  ++ ++PKPE YNGQ AIVAVNVHL
Sbjct: 763  NIRVDTLSHQLYYPQRPLFRTVTSDCLG-KPGDTRGHNGIVPKPELYNGQNAIVAVNVHL 821

Query: 2458 GYNQEDSLVMNRSSLERGMFRSEHIRSYKADVDSQEVAGKKHKLEEIIKFGKIPSKIGRV 2637
            GYNQEDSLVMNR+SLERGMFRSEHIRSYKADVD++E+  K+ K ++ + FGKIPSKIGRV
Sbjct: 822  GYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRV 881

Query: 2638 DSLEDDGFPFVGANLQTGDIVIGKHAESGTDQSVKLKHTEKGMVQKVVLSSNDEDKNFAV 2817
            DSL+DDGFPF+GANLQ+GDIVIG+ AESG D S+KLKHTE+GMVQKVVLSSNDE KNFAV
Sbjct: 882  DSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAV 941

Query: 2818 VSLRQVRSPSLGDKFSSMHGQKGVLGYLDSQENFPFTAQGIVPDIVINPHAFPSRQTPGQ 2997
            VSLRQVRSP LGDKFSSMHGQKGVLG+L+SQENFPFT QGIVPDIVINPH+FPSRQTPGQ
Sbjct: 942  VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQ 1001

Query: 2998 XXXXXXXXXXXXXXXXRYATPFSSVSVDAITDQLHRAGFSRWGNERVYNGRTGEMIRSLV 3177
                            +YATPFS++SV+AIT+QLHRAGFSRWGNERVYNGRTGEM+RSL+
Sbjct: 1002 LLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLI 1061

Query: 3178 FMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 3357
            FMGPT YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA
Sbjct: 1062 FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1121

Query: 3358 NLHERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVRVSVPYG 3537
            NLHERLFTLSD SQMHIC+KCK+ ANVIQR V GGRKIRGPYCR C+S ++IV+V+VPYG
Sbjct: 1122 NLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDEIVKVNVPYG 1181

Query: 3538 AKLLSQELFSMGISLKFETKLC 3603
            AKLL QELFSMGISLKFET+LC
Sbjct: 1182 AKLLCQELFSMGISLKFETRLC 1203


>ref|XP_002324332.1| predicted protein [Populus trichocarpa] gi|222865766|gb|EEF02897.1|
            predicted protein [Populus trichocarpa]
          Length = 1160

 Score = 1583 bits (4100), Expect = 0.0
 Identities = 786/1157 (67%), Positives = 912/1157 (78%), Gaps = 2/1157 (0%)
 Frame = +1

Query: 136  LNKLCKKAATSFFEQYGLISHQLNSYNDFIKHGLQNVFDSIGVITVEPGYDPSKKGDGEW 315
            L   CKKAA+ FF++YGLISHQ+NSYN FI  GLQ VFDS G + VEPGYD SK+ DGEW
Sbjct: 23   LQSFCKKAASLFFDEYGLISHQINSYNSFINSGLQRVFDSFGEVAVEPGYDSSKQKDGEW 82

Query: 316  RYASLEFGKVSLTPPVLYTGNFSEENSGVLDLYPRHARLQNMTYSSKMKVGVHLQVYTQK 495
            R AS+ FGKV+L  P  + G  S+      +++PRHARLQNMTYS++MK+ V++QVYTQ 
Sbjct: 83   RRASVRFGKVTLDRPSFWGGTSSDAEH---NMFPRHARLQNMTYSARMKIHVNVQVYTQT 139

Query: 496  MVRSDKFKTGKEQFVDKEVCKDIREEITIGLLPVMVKSDLCRMSKAEKGDCDFDHGGYFI 675
            + RSDKFKTG ++ V K V      EI IG +PVMVKSDLC ++  EKGDCDFDHGGYF+
Sbjct: 140  VGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCDFDHGGYFL 199

Query: 676  IKGAEKTFVAQEQICLKRLWLASKPTWVASYRHAMKRKRVYVRLEDPDKND-IGGGEKVL 852
            IKGAEK F+AQEQIC+KRLW+++   W  SY+  +KR R+ VRL +  K + I G +K L
Sbjct: 200  IKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGL 259

Query: 853  EVYFFGVQIPVWTLFFALGVSSDKEVVDMIDADYEDGRIVNLLIASIYHADEKCDEECHE 1032
             VYF   +IP+W LFFALGV SDKEV+D+ID    D  IVN+  ASI+ ADEKC     E
Sbjct: 260  CVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKC-----E 314

Query: 1033 KFRRKGMAFKYVEKKLQSCPFPPSESTEDCINKYLFSSLGGFKRKARFLAFMVKCLLQAY 1212
             FRR+  A  YV+K L+   FPP ES ED I+ YLF  L   + KARFL +MVKCLL+AY
Sbjct: 315  HFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAY 374

Query: 1213 TGRRKVDNRDDFRNKXXXXXXXXXXXXXKVHMKHAEKRMVKAMQKDLYGDKLEH-IEKYM 1389
            TG RK DNRD FRNK             KVH+ HA +RM KA+Q+DLYGD+  H IE Y+
Sbjct: 375  TGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYL 434

Query: 1390 DSSIITNGLSRAFSTGAWSHPYTRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDYTGRV 1569
            D+SI+TNGL+RAFSTGAW HP+   ER SGVV NLGR NPLQ + ++R+TRQ V YTG+V
Sbjct: 435  DASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKV 494

Query: 1570 GDARYPHPSHWGRLCFLSTPDGENCGLIKNLASTGLVSTTVYESILDKLLDCGMEDLVDD 1749
            GDARYPHPSHWGR+CFLSTPDGENCGL+KNLA TG+VST + ES++DKL D GME LVDD
Sbjct: 495  GDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDSGMEKLVDD 554

Query: 1750 TWTCLRGKDNIFVDGELVGICRDPASFVAELRNLRRSKELPHQVEIKRDAKNREVRIFCD 1929
            T+T L GK  +F++GE VG+C D   FV ELR++RR +ELP+QVEIKRD + REVRIF D
Sbjct: 555  TYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSD 614

Query: 1930 AGRILRPLLVVSNLRKVKLFKGGNYSFQSLLDAXXXXXXXXXXXXDCCTAWGIRYLMMES 2109
            AGRILRPLLVV NL K+K FKGGNY F SLLD             DCCTAWGI++L+ + 
Sbjct: 615  AGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADI 674

Query: 2110 SVDAPKKYTHCELDMSFLLGLSAGLTPFTNHDHARRALYQSQKHSHQAIGFSTTNPTIRV 2289
                P KY+HCELDMSFLLGLS G+ PF NHDHARR LYQ+QKHS QAIGFSTTNP IRV
Sbjct: 675  EGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRV 734

Query: 2290 DTGINQLYYPQKPLFRTMLAECLGVSEYHTDNNSKMLPKPEFYNGQCAIVAVNVHLGYNQ 2469
            DT  +QL+YPQ+PLFRTM+++CL            +LPKPE +NGQ AIVAVNVHLGYNQ
Sbjct: 735  DTLSHQLHYPQRPLFRTMISDCL------------VLPKPELFNGQNAIVAVNVHLGYNQ 782

Query: 2470 EDSLVMNRSSLERGMFRSEHIRSYKADVDSQEVAGKKHKLEEIIKFGKIPSKIGRVDSLE 2649
            EDSLVMNR+SLERGMFRSEHIRSYKA+VD++E+  K+ K E+ I FGKI SKIGRVDSL+
Sbjct: 783  EDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIGRVDSLD 842

Query: 2650 DDGFPFVGANLQTGDIVIGKHAESGTDQSVKLKHTEKGMVQKVVLSSNDEDKNFAVVSLR 2829
            DDGFPF+GAN+Q+GDIVIGK AESG D SVKLKHTE+GMVQKVVLSSNDE KNFAVVSLR
Sbjct: 843  DDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNFAVVSLR 902

Query: 2830 QVRSPSLGDKFSSMHGQKGVLGYLDSQENFPFTAQGIVPDIVINPHAFPSRQTPGQXXXX 3009
            QVRSP LGDKFSSMHGQKGVLG+L+SQENFPFT QG+VPDIVINPHAFPSRQTPGQ    
Sbjct: 903  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTPGQLLEA 962

Query: 3010 XXXXXXXXXXXXRYATPFSSVSVDAITDQLHRAGFSRWGNERVYNGRTGEMIRSLVFMGP 3189
                        RYATPFS++SVD I DQLHRA FSRWGNERVYNGRTGEM+RSL+FMGP
Sbjct: 963  ALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRSLIFMGP 1022

Query: 3190 TCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 3369
            T YQRL+HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE
Sbjct: 1023 TFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHE 1082

Query: 3370 RLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVRVSVPYGAKLL 3549
            RLFTLSD S+MHIC+KCK+ ANVIQR V GGRKIRGPYCR C+S +D+V+VSVPYGAKLL
Sbjct: 1083 RLFTLSDSSEMHICQKCKNVANVIQRGVPGGRKIRGPYCRVCESVDDLVKVSVPYGAKLL 1142

Query: 3550 SQELFSMGISLKFETKL 3600
             QELFSMGISLKF+T++
Sbjct: 1143 CQELFSMGISLKFDTRV 1159


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1565 bits (4051), Expect = 0.0
 Identities = 776/1162 (66%), Positives = 917/1162 (78%), Gaps = 4/1162 (0%)
 Frame = +1

Query: 130  AFLNKLCKKAATSFFEQYGLISHQLNSYNDFIKHGLQNVFDSIGVITVEPGYDPSKKGDG 309
            AFL   CKK++ +FF QYGLISHQ+NSYNDFIK+G+Q  FD  G I V+PGYDPSKKGDG
Sbjct: 46   AFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSKKGDG 105

Query: 310  EWRYASLEFGKVSLTPPVLYTGNFSEENSGVLDLYPRHARLQNMTYSSKMKVGVHLQVYT 489
            EWRYA+++FGKV+L  P  + G  S +   +L   PRHARLQNMTYSS+MK+ + L++YT
Sbjct: 106  EWRYATVKFGKVTLDKPKFWGGAASGKEYNML---PRHARLQNMTYSSRMKINISLEIYT 162

Query: 490  QKMVRSDKFKTGKEQFVDKEVCKDIRE--EITIGLLPVMVKSDLCRMSKAEKGDCDFDHG 663
            QK+V SDKFKTGK+Q+VDKE  +   +  ++ IG LPVMV SDLC M   +K DC+FD G
Sbjct: 163  QKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRDCEFDRG 222

Query: 664  GYFIIKGAEKTFVAQEQICLKRLWLASKPTWVASYRHAMKRKRVYVRLEDPDKN-DIGGG 840
            GYF+IKGAEK F+AQEQICL+RLW+++   W  +YR  +KR R+ +RL +  K+ D+   
Sbjct: 223  GYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSK 282

Query: 841  EKVLEVYFFGVQIPVWTLFFALGVSSDKEVVDMIDADYEDGRIVNLLIASIYHADEKCDE 1020
            EKVL VYF   ++PVW LFFALGVSSDKE+VD+ID   +D  ++N+L AS+   D   ++
Sbjct: 283  EKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVD---ND 339

Query: 1021 ECHEKFRRKGMAFKYVEKKLQSCPFPPSESTEDCINKYLFSSLGGFKRKARFLAFMVKCL 1200
            +  + FRR   A  +++ +++   FPP++  EDC+N YLF+SL G K+K  FL +MVKCL
Sbjct: 340  DKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCL 399

Query: 1201 LQAYTGRRKVDNRDDFRNKXXXXXXXXXXXXXKVHMKHAEKRMVKAMQKDLYGDKLEH-I 1377
            LQAYTGRRK DNRDDFRNK             KVH+ HA +RM KA+Q+DLYGD+  H I
Sbjct: 400  LQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPI 459

Query: 1378 EKYMDSSIITNGLSRAFSTGAWSHPYTRGERTSGVVANLGRTNPLQMIAEMRRTRQHVDY 1557
            E Y+D+SIITNGLSRAFSTGAW+H + R ER SGVVA LGR NPLQ +AE+RRTRQ V Y
Sbjct: 460  EHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAY 519

Query: 1558 TGRVGDARYPHPSHWGRLCFLSTPDGENCGLIKNLASTGLVSTTVYESILDKLLDCGMED 1737
            TG+VGDARYPHPSHWGR+CFLSTPDGENCGLIKNL+ TGLVS    +SI   L  CGME+
Sbjct: 520  TGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKKSITPTLFRCGMEN 579

Query: 1738 LVDDTWTCLRGKDNIFVDGELVGICRDPASFVAELRNLRRSKELPHQVEIKRDAKNREVR 1917
            LVD+T T   GK  IF+DGE VG+C D  SFV  +R  RR     HQVE+KRD + +EVR
Sbjct: 580  LVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLKEVR 639

Query: 1918 IFCDAGRILRPLLVVSNLRKVKLFKGGNYSFQSLLDAXXXXXXXXXXXXDCCTAWGIRYL 2097
            IF DAGRILRPLLVV NL ++   KG NY+FQSLLD             DC  AW I++L
Sbjct: 640  IFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHL 699

Query: 2098 MMESSVDAPKKYTHCELDMSFLLGLSAGLTPFTNHDHARRALYQSQKHSHQAIGFSTTNP 2277
            M +   +   KY+HCELDMSFLLGLS GL PF NHDHARRAL+QSQKHS+QAIGFS TN 
Sbjct: 700  MED---EGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNS 756

Query: 2278 TIRVDTGINQLYYPQKPLFRTMLAECLGVSEYHTDNNSKMLPKPEFYNGQCAIVAVNVHL 2457
              RVDT  +QL+YPQ+PLFRTM A+CLG   Y   +++ +LPKPEFYNGQ AIVAVNVHL
Sbjct: 757  NFRVDTLSHQLHYPQRPLFRTMTADCLGTPGY-LSSHAGILPKPEFYNGQNAIVAVNVHL 815

Query: 2458 GYNQEDSLVMNRSSLERGMFRSEHIRSYKADVDSQEVAGKKHKLEEIIKFGKIPSKIGRV 2637
            GYNQEDSLVMNR+SLERGMFRSEHIRSYKA+VD++E + K+ K ++ I FGK  SKIGRV
Sbjct: 816  GYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRV 875

Query: 2638 DSLEDDGFPFVGANLQTGDIVIGKHAESGTDQSVKLKHTEKGMVQKVVLSSNDEDKNFAV 2817
            DSL+DDGFP++GANLQ+GDIVIG+ AESG D S+KLKHTEKGMVQKVVLSSND+ KN+AV
Sbjct: 876  DSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAV 935

Query: 2818 VSLRQVRSPSLGDKFSSMHGQKGVLGYLDSQENFPFTAQGIVPDIVINPHAFPSRQTPGQ 2997
            VSLRQVRSP LGDKFSSMHGQKGVLG+L+SQENFPFT QGIVPDIVINPHAFPSRQTPGQ
Sbjct: 936  VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQ 995

Query: 2998 XXXXXXXXXXXXXXXXRYATPFSSVSVDAITDQLHRAGFSRWGNERVYNGRTGEMIRSLV 3177
                            +YATPFS+ SVDAITDQLHRAGFSRWG+ERVYNGRTGEM+RSL+
Sbjct: 996  LLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLI 1055

Query: 3178 FMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 3357
            FMGPT YQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA
Sbjct: 1056 FMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASA 1115

Query: 3358 NLHERLFTLSDCSQMHICRKCKHPANVIQRTVMGGRKIRGPYCRYCQSSEDIVRVSVPYG 3537
            NLHERLFTLSD SQMH+C+KCK+ A+VIQR+V GGRK+RGPYCR C+S +DIVRV+VPYG
Sbjct: 1116 NLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYG 1175

Query: 3538 AKLLSQELFSMGISLKFETKLC 3603
            AKLL QELFSMGI+LKFET+LC
Sbjct: 1176 AKLLCQELFSMGINLKFETQLC 1197