BLASTX nr result
ID: Bupleurum21_contig00002500
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00002500
(1716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis... 767 0.0
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera] 767 0.0
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [... 756 0.0
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [... 737 0.0
ref|XP_002517473.1| structure-specific recognition protein, puta... 736 0.0
>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product
[Vitis vinifera]
Length = 644
Score = 767 bits (1981), Expect = 0.0
Identities = 381/435 (87%), Positives = 406/435 (93%)
Frame = -3
Query: 1714 RDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEIDLNGNMLSFLVGSKQAFEVSLADVS 1535
R+QDVT+LT FFQ SCG+ PEEKQLSVSG+NWGE+DLNGNML+FLVGSKQAFEVSLADVS
Sbjct: 78 REQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVS 137
Query: 1534 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIVS 1355
QTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN PPAQVFR+KI+S
Sbjct: 138 QTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPPAQVFRDKIMS 197
Query: 1354 MADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVIRLFQLPK 1175
MADV GGEEAVVTFEGIAILTPRGRY+VELHLSFLRLQGQANDFKIQYSSV+RLF LPK
Sbjct: 198 MADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPK 257
Query: 1174 SNQPHTFVVVSLDPPIRKGQTLYPHIVLQFETDYVVESTLSLSDELLNTKYKDKLYPSHK 995
SNQPHTFVVV+LDPPIRKGQTLYPHIV+QFETDYVV+S LSLS+ELLN+KYKDKL PS+K
Sbjct: 258 SNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLSEELLNSKYKDKLEPSYK 317
Query: 994 GLICDVFTSIFRVLSGAKMTKPGNFRSCQDGYAVKSSLKAEDGVLYPLERSFFFLPKPPT 815
GLI +VFT I R LSGAK+TKPG FRSCQDGYAVKSSLKAEDGVLYPLE+SFFFLPKPPT
Sbjct: 318 GLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPT 377
Query: 814 LILHDEIDYVEFERHSAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLK 635
LILH+EIDYVEFERH+AGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KGLK
Sbjct: 378 LILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 437
Query: 634 IMNLGGPQAADGVAAVLQNDDDDAVDPHLERIKNEAGGXXXXXXXXDFVAEKDDSGSPTD 455
IMNLG Q ADGVAAVLQNDDDDAVDPHLERIKNEAGG DFV +KDD GSPTD
Sbjct: 438 IMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDEEDEDFVLDKDDGGSPTD 497
Query: 454 DSGEEHSDASDSGGE 410
DSGEE SDAS+SGGE
Sbjct: 498 DSGEEESDASESGGE 512
Score = 115 bits (288), Expect = 4e-23
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -2
Query: 233 LSAFMFFSKTERENVKKSNPGISFTDVGRVLGERWNKLSGEEKEVYEANAKQDKKRYTDE 54
+S FMFFS+TEREN+KKS PGI+FT+VGRVLG++W K++ EEKE YEA A+ DKKRY DE
Sbjct: 563 MSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDE 622
Query: 53 MKGY-NNPQASNADSGNE 3
+ GY +NPQ N DSGNE
Sbjct: 623 ISGYKSNPQPMNVDSGNE 640
>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 767 bits (1980), Expect = 0.0
Identities = 381/435 (87%), Positives = 405/435 (93%)
Frame = -3
Query: 1714 RDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEIDLNGNMLSFLVGSKQAFEVSLADVS 1535
R+QDVT+LT FFQ SCG+ PEEKQLSVSG+NWGE+DLNGNML+FLVGSKQAFEVSLADVS
Sbjct: 78 REQDVTNLTNFFQHSCGJNPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVS 137
Query: 1534 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIVS 1355
QTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN PPAQVFR+KI+S
Sbjct: 138 QTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPPAQVFRDKIMS 197
Query: 1354 MADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVIRLFQLPK 1175
MADV GGEEAVVTFEGIAILTPRGRY+VELHLSFLRLQGQANDFKIQYSSV+RLF LPK
Sbjct: 198 MADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPK 257
Query: 1174 SNQPHTFVVVSLDPPIRKGQTLYPHIVLQFETDYVVESTLSLSDELLNTKYKDKLYPSHK 995
SNQPHTFVVV+LDPPIRKGQTLYPHIV+QFETDYVV+S LSLS+ELLN KYKDKL PS+K
Sbjct: 258 SNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLSEELLNXKYKDKLEPSYK 317
Query: 994 GLICDVFTSIFRVLSGAKMTKPGNFRSCQDGYAVKSSLKAEDGVLYPLERSFFFLPKPPT 815
GLI +VFT I R LSGAK+TKPG FRSCQDGYAVKSSLKAEDGVLYPLE+SFFFLPKPPT
Sbjct: 318 GLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPT 377
Query: 814 LILHDEIDYVEFERHSAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLK 635
LILH+EIDYVEFERH+AGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KGLK
Sbjct: 378 LILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 437
Query: 634 IMNLGGPQAADGVAAVLQNDDDDAVDPHLERIKNEAGGXXXXXXXXDFVAEKDDSGSPTD 455
IMNLG Q ADGVAAVLQNDDDDAVDPHLERIKNEAGG DFV +KDD GSPTD
Sbjct: 438 IMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDEEDEDFVLDKDDGGSPTD 497
Query: 454 DSGEEHSDASDSGGE 410
DSGEE SDAS+SGGE
Sbjct: 498 DSGEEESDASESGGE 512
Score = 115 bits (288), Expect = 4e-23
Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -2
Query: 233 LSAFMFFSKTERENVKKSNPGISFTDVGRVLGERWNKLSGEEKEVYEANAKQDKKRYTDE 54
+S FMFFS+TEREN+KKS PGI+FT+VGRVLG++W K++ EEKE YEA A+ DKKRY DE
Sbjct: 563 MSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDE 622
Query: 53 MKGY-NNPQASNADSGNE 3
+ GY +NPQ N DSGNE
Sbjct: 623 ISGYKSNPQPMNVDSGNE 640
>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
Length = 642
Score = 756 bits (1951), Expect = 0.0
Identities = 374/435 (85%), Positives = 403/435 (92%)
Frame = -3
Query: 1714 RDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEIDLNGNMLSFLVGSKQAFEVSLADVS 1535
RDQD++SLT FFQ++CGI PEEKQLSVSG+NWGE+DLNGNML+FLVGSKQAFEVSLADV+
Sbjct: 78 RDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVA 137
Query: 1534 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIVS 1355
QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPN+NTQFVGDE+ PPAQVFR+KI+S
Sbjct: 138 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKIMS 197
Query: 1354 MADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVIRLFQLPK 1175
MADV+ G EEAVVTFEGIAILTPRGRY+VELHLSFLRLQGQANDFKIQYSSV+RLF LPK
Sbjct: 198 MADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPK 257
Query: 1174 SNQPHTFVVVSLDPPIRKGQTLYPHIVLQFETDYVVESTLSLSDELLNTKYKDKLYPSHK 995
SNQPHTFVVV+LDPPIRKGQTLYPHIVLQFETDYVV+STL + DEL NTKYKDKL PS+K
Sbjct: 258 SNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPSYK 317
Query: 994 GLICDVFTSIFRVLSGAKMTKPGNFRSCQDGYAVKSSLKAEDGVLYPLERSFFFLPKPPT 815
GLI +VFT+I R LSGAK+T+PG FRSCQDGYAVKSSLKAEDGVLYPLE+SFFFLPKPPT
Sbjct: 318 GLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPT 377
Query: 814 LILHDEIDYVEFERHSAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLK 635
LILH+EIDYVEFERH+AGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KGLK
Sbjct: 378 LILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 437
Query: 634 IMNLGGPQAADGVAAVLQNDDDDAVDPHLERIKNEAGGXXXXXXXXDFVAEKDDSGSPTD 455
IMNLG QA DGVAAVLQ DDDDAVDPHLERI+NEAGG DFVA+KDD GSPTD
Sbjct: 438 IMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSPTD 497
Query: 454 DSGEEHSDASDSGGE 410
DSG + SD S SGGE
Sbjct: 498 DSGGDDSDGSASGGE 512
Score = 122 bits (306), Expect = 3e-25
Identities = 54/77 (70%), Positives = 65/77 (84%)
Frame = -2
Query: 233 LSAFMFFSKTERENVKKSNPGISFTDVGRVLGERWNKLSGEEKEVYEANAKQDKKRYTDE 54
+S FMFFSK EREN+KKSNPGISFT++GRVLG++WNK+S EEKE YE+ A+ DKKRY +E
Sbjct: 562 ISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEE 621
Query: 53 MKGYNNPQASNADSGNE 3
+ GY NPQ N DSGNE
Sbjct: 622 ISGYKNPQPMNIDSGNE 638
>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 640
Score = 737 bits (1902), Expect = 0.0
Identities = 361/435 (82%), Positives = 399/435 (91%)
Frame = -3
Query: 1714 RDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEIDLNGNMLSFLVGSKQAFEVSLADVS 1535
RDQDV SLT FFQ +CGI+ EEKQLSVSG+NWGE+DLNGNML+F VGSKQAFEVSLADVS
Sbjct: 78 RDQDVVSLTNFFQNTCGISVEEKQLSVSGRNWGEVDLNGNMLAFTVGSKQAFEVSLADVS 137
Query: 1534 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIVS 1355
QTQLQGKNDV+LEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDEN PPAQVFR+KI+S
Sbjct: 138 QTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENRPPAQVFRDKIMS 197
Query: 1354 MADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVIRLFQLPK 1175
MADV GGE+A+VTFEGIAILTPRGRY+VELH+SFLRLQGQANDFKIQYSSV+RLF LPK
Sbjct: 198 MADVGAGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQANDFKIQYSSVVRLFLLPK 257
Query: 1174 SNQPHTFVVVSLDPPIRKGQTLYPHIVLQFETDYVVESTLSLSDELLNTKYKDKLYPSHK 995
SNQPHTFV++SLDPPIRKGQTLYPHIV+QFETDYVVES L+++++L NTKYKDKL S+K
Sbjct: 258 SNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAINEDLYNTKYKDKLDLSYK 317
Query: 994 GLICDVFTSIFRVLSGAKMTKPGNFRSCQDGYAVKSSLKAEDGVLYPLERSFFFLPKPPT 815
GLI +VFT+I R LSGAK+TKPG FRSCQDGYAVKSSLKAEDG+LYPLE+SFFFLPKPPT
Sbjct: 318 GLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPT 377
Query: 814 LILHDEIDYVEFERHSAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLK 635
LILH+EIDYVEFERH+AGGSNMHYFDLLIRLK+EQEHLFRNIQRNEYHNL++FISSKGLK
Sbjct: 378 LILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLK 437
Query: 634 IMNLGGPQAADGVAAVLQNDDDDAVDPHLERIKNEAGGXXXXXXXXDFVAEKDDSGSPTD 455
I+NLG Q G+ VL+NDDDDAVDPHLERIKNEAGG DFVA+KDD GSPTD
Sbjct: 438 ILNLGDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDEGSPTD 497
Query: 454 DSGEEHSDASDSGGE 410
DSG + SDA+DSG E
Sbjct: 498 DSGADDSDATDSGDE 512
Score = 122 bits (307), Expect = 2e-25
Identities = 57/77 (74%), Positives = 64/77 (83%)
Frame = -2
Query: 233 LSAFMFFSKTERENVKKSNPGISFTDVGRVLGERWNKLSGEEKEVYEANAKQDKKRYTDE 54
+S FMFFSK EREN+KK+NPGISFTDV RVLGE+W KLS EEKE YEA A++DKKRY DE
Sbjct: 560 MSGFMFFSKLERENLKKTNPGISFTDVSRVLGEKWKKLSVEEKEPYEAKAREDKKRYKDE 619
Query: 53 MKGYNNPQASNADSGNE 3
+ GY NPQ N DSGNE
Sbjct: 620 ISGYKNPQPMNIDSGNE 636
>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
gi|223543484|gb|EEF45015.1| structure-specific
recognition protein, putative [Ricinus communis]
Length = 640
Score = 736 bits (1899), Expect = 0.0
Identities = 363/433 (83%), Positives = 402/433 (92%)
Frame = -3
Query: 1714 RDQDVTSLTTFFQTSCGITPEEKQLSVSGKNWGEIDLNGNMLSFLVGSKQAFEVSLADVS 1535
RDQD +LT+FFQ++CGIT EEKQLSVSG+NWGE+DLNGNML+FLVGSKQAFEVSLADVS
Sbjct: 78 RDQDHANLTSFFQSNCGITLEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVS 137
Query: 1534 QTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFVGDENCPPAQVFRNKIVS 1355
QTQ+QGKNDV+LEFHVDDTTGANEKDSLMEISFHIP++NTQFVGDEN PPAQVFR+KI+S
Sbjct: 138 QTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPSNNTQFVGDENHPPAQVFRDKIMS 197
Query: 1354 MADVTPGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQANDFKIQYSSVIRLFQLPK 1175
MADV PGGEEAVVTF+G+AILTPRGRY+VELHLSFLRLQGQANDFKIQYSSV+RLF LPK
Sbjct: 198 MADVNPGGEEAVVTFDGVAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPK 257
Query: 1174 SNQPHTFVVVSLDPPIRKGQTLYPHIVLQFETDYVVESTLSLSDELLNTKYKDKLYPSHK 995
SNQPHTFV+V+LDPPIRKGQTLYPHIVLQF+TD+VV+STL+++++LL+TKYKDKL PS+K
Sbjct: 258 SNQPHTFVIVTLDPPIRKGQTLYPHIVLQFDTDFVVQSTLTMNEDLLSTKYKDKLEPSYK 317
Query: 994 GLICDVFTSIFRVLSGAKMTKPGNFRSCQDGYAVKSSLKAEDGVLYPLERSFFFLPKPPT 815
GLI +VFT+I R LSGAK+TKPG FRSCQDGYAVKSSLKAEDG+LYPLE+SFFFLPKPPT
Sbjct: 318 GLIHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGLLYPLEKSFFFLPKPPT 377
Query: 814 LILHDEIDYVEFERHSAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISSKGLK 635
LILH+EIDYVEFERH+ G SNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFIS KGLK
Sbjct: 378 LILHEEIDYVEFERHATGSSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLK 437
Query: 634 IMNLGGPQAADGVAAVLQNDDDDAVDPHLERIKNEAGGXXXXXXXXDFVAEKDDSGSPTD 455
IMNLG + +GVAAVLQNDDDDAVDPHLERIKNEA G DFVA+KDD GSPTD
Sbjct: 438 IMNLGDMKTTNGVAAVLQNDDDDAVDPHLERIKNEA-GDESDEEDSDFVADKDDGGSPTD 496
Query: 454 DSGEEHSDASDSG 416
DSGEE SD S SG
Sbjct: 497 DSGEEDSDGSLSG 509
Score = 115 bits (289), Expect = 3e-23
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = -2
Query: 233 LSAFMFFSKTERENVKKSNPGISFTDVGRVLGERWNKLSGEEKEVYEANAKQDKKRYTDE 54
+S FMFFS+ ERENVKKSNPGI+F DVG++LG++W KLS EEKE YEA A+ DKKRY +E
Sbjct: 560 MSGFMFFSQMERENVKKSNPGIAFGDVGKILGDKWKKLSAEEKEPYEAKARADKKRYKEE 619
Query: 53 MKGYNNPQASNADSGNE 3
+ GY NPQ + DSGNE
Sbjct: 620 VSGYKNPQPMDIDSGNE 636