BLASTX nr result

ID: Bupleurum21_contig00002498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002498
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94339.1| unknown [Populus trichocarpa]                          154   1e-35
ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|2...   151   7e-35
ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330...   149   4e-34
gb|ACU20615.1| unknown [Glycine max]                                  149   4e-34
ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330...   146   3e-33

>gb|ABK94339.1| unknown [Populus trichocarpa]
          Length = 164

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/147 (53%), Positives = 102/147 (69%), Gaps = 3/147 (2%)
 Frame = +3

Query: 78  HSHSFASS---HRDVTYSCGSCGFDLNLNSSSRNTXXXXXXXXXXXXXXXXXFVRIDESR 248
           H HSF+SS   HR V+YSCG CG++LNL+SS+RNT                 F  IDESR
Sbjct: 16  HHHSFSSSSASHRHVSYSCGICGYELNLSSSNRNTSTIGSKYGKSIKRGKISFFFIDESR 75

Query: 249 FTQLEEFQCVPYFISKKSWGLFRQRTKLTCRKCGKYVGVSYDDNALNYPIVADGINAASG 428
           FTQ++EFQC P+F SK S GLFRQRT L CRKCG ++G++Y D A  YP+VADG +++S 
Sbjct: 76  FTQVDEFQCFPFF-SKNSLGLFRQRTALLCRKCGNHIGIAYADEASAYPLVADGSDSSSV 134

Query: 429 SKFPAYKRYDIRIRALQPSSSAASTIP 509
           S+    ++YD++IRALQPSS+   +IP
Sbjct: 135 SEVFKRRKYDVKIRALQPSSAEQFSIP 161


>ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|222842714|gb|EEE80261.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  151 bits (382), Expect = 7e-35
 Identities = 75/142 (52%), Positives = 100/142 (70%), Gaps = 3/142 (2%)
 Frame = +3

Query: 72  NQHSHSFASS---HRDVTYSCGSCGFDLNLNSSSRNTXXXXXXXXXXXXXXXXXFVRIDE 242
           N H HSF+SS    R V+YSCG CG++LNL+SS+RNT                 F  IDE
Sbjct: 10  NPH-HSFSSSSASQRHVSYSCGICGYELNLSSSNRNTSSIGSKYGKSIKRGIISFFFIDE 68

Query: 243 SRFTQLEEFQCVPYFISKKSWGLFRQRTKLTCRKCGKYVGVSYDDNALNYPIVADGINAA 422
           SRFTQ++EFQC+P+F S+ SWGLF +RT L CRKCG  +G++YDD A  YP+VADG +++
Sbjct: 69  SRFTQVDEFQCIPFF-SRNSWGLFHRRTALLCRKCGNNIGIAYDDKASAYPLVADGSDSS 127

Query: 423 SGSKFPAYKRYDIRIRALQPSS 488
           S S+   +++YD++IRALQPSS
Sbjct: 128 SVSEVSKHRKYDVKIRALQPSS 149


>ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  149 bits (376), Expect = 4e-34
 Identities = 76/156 (48%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
 Frame = +3

Query: 54  MDKNDYNQHSHS----FASSHRDVTYSCGSCGFDLNLNSSSRNTXXXXXXXXXXXXXXXX 221
           MD + + +  H       SS RDV YSCG+CG++LNL+SS+RNT                
Sbjct: 1   MDDSAFKRDGHFNRTYSCSSQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGII 60

Query: 222 XFVRIDESRFTQLEEFQCVPYFISKKSWGLFRQRTKLTCRKCGKYVGVSYDDNALNYPIV 401
            F  ID SRFTQ++E QCVP+F  K SWGLFR+RTKL CRKCG ++G +Y+    ++P+V
Sbjct: 61  SFFSIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLV 119

Query: 402 ADGINAASGSKFPAYKRYDIRIRALQPSSSAASTIP 509
            DG  ++  SK  ++ +YDIRIRALQPSSS  S IP
Sbjct: 120 TDGAESSPSSKVVSHTKYDIRIRALQPSSSEESGIP 155


>gb|ACU20615.1| unknown [Glycine max]
          Length = 158

 Score =  149 bits (376), Expect = 4e-34
 Identities = 76/156 (48%), Positives = 100/156 (64%), Gaps = 4/156 (2%)
 Frame = +3

Query: 54  MDKNDYNQHSHS----FASSHRDVTYSCGSCGFDLNLNSSSRNTXXXXXXXXXXXXXXXX 221
           MD + + +  H       SS RDV YSCG+CG++LNL+SS+RNT                
Sbjct: 1   MDDSAFKRDGHFNRTYSCSSQRDVRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGII 60

Query: 222 XFVRIDESRFTQLEEFQCVPYFISKKSWGLFRQRTKLTCRKCGKYVGVSYDDNALNYPIV 401
            F  ID SRFTQ++E QCVP+F  K SWGLFR+RTKL CRKCG ++G +Y+    ++P+V
Sbjct: 61  SFFSIDLSRFTQVDEIQCVPHF-DKHSWGLFRRRTKLLCRKCGSHIGNAYNGYTSSFPLV 119

Query: 402 ADGINAASGSKFPAYKRYDIRIRALQPSSSAASTIP 509
            DG  ++  SK  ++ +YDIRIRALQPSSS  S IP
Sbjct: 120 TDGAESSPSSKVVSHTKYDIRIRALQPSSSEESGIP 155


>ref|XP_003544689.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  146 bits (368), Expect = 3e-33
 Identities = 72/138 (52%), Positives = 94/138 (68%)
 Frame = +3

Query: 96  SSHRDVTYSCGSCGFDLNLNSSSRNTXXXXXXXXXXXXXXXXXFVRIDESRFTQLEEFQC 275
           SS RDV YSCG+CG++LNL+SS+RNT                 F  ID SRFTQ++E QC
Sbjct: 19  SSQRDVCYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQC 78

Query: 276 VPYFISKKSWGLFRQRTKLTCRKCGKYVGVSYDDNALNYPIVADGINAASGSKFPAYKRY 455
           VP+F  K SWGLFR+RTKL CRKCG ++G +Y+    ++P+V+DG  ++  SK  ++ +Y
Sbjct: 79  VPHF-DKHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSSFPLVSDGAESSPSSKVVSHTKY 137

Query: 456 DIRIRALQPSSSAASTIP 509
           DIRI ALQPSSS  S IP
Sbjct: 138 DIRICALQPSSSEESGIP 155


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