BLASTX nr result

ID: Bupleurum21_contig00002497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002497
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   157   6e-37
ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|1...   157   8e-37
ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261...   155   2e-36
emb|CBI23720.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri...   155   4e-36

>ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449487476|ref|XP_004157645.1| PREDICTED: 28
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 276

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/91 (81%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   NLDGSVYGGRTLRVNFADKPKPKEALYPETEHKLFVGNLSWTVTSDSLTKAFQEYGNVVG 180
           NLDGS Y GR LRVNF+DKPKPKE LYPETE+KLFVGNLSW+VTS+ LT+AFQEYGNVVG
Sbjct: 162 NLDGSAYMGRILRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVG 221

Query: 181 ARVLFDGETGRSRGYGFVSFPTKSEMEAALQ 273
           ARV++DGETG+SRGYGFVS+ TKSEME AL+
Sbjct: 222 ARVIYDGETGKSRGYGFVSYSTKSEMETALE 252


>ref|XP_002311696.1| predicted protein [Populus trichocarpa] gi|118486835|gb|ABK95252.1|
           unknown [Populus trichocarpa]
           gi|222851516|gb|EEE89063.1| predicted protein [Populus
           trichocarpa]
          Length = 279

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/91 (81%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   NLDGSVYGGRTLRVNFADKPKPKEALYPETEHKLFVGNLSWTVTSDSLTKAFQEYGNVVG 180
           NLDGS Y GR LRVNFADKPKPKE LYPETE+KLF+GNLSW+VTS+SLT+AFQEYGNVVG
Sbjct: 167 NLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVG 226

Query: 181 ARVLFDGETGRSRGYGFVSFPTKSEMEAALQ 273
           ARVL+DGETG+SRGYGFV + TK E+E ALQ
Sbjct: 227 ARVLYDGETGKSRGYGFVCYSTKEELETALQ 257


>ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
          Length = 751

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/91 (79%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   NLDGSVYGGRTLRVNFADKPKPKEALYPETEHKLFVGNLSWTVTSDSLTKAFQEYGNVVG 180
           NLDGS YGGRTLRVNF+DKPKPK  LYPETE+KLFVGNLSW+VTS+SL + FQEYGNV+G
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230

Query: 181 ARVLFDGETGRSRGYGFVSFPTKSEMEAALQ 273
           ARVL+DGETGRSRGYGFV + TK+EM+ AL+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261


>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/91 (79%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   NLDGSVYGGRTLRVNFADKPKPKEALYPETEHKLFVGNLSWTVTSDSLTKAFQEYGNVVG 180
           NLDGS YGGRTLRVNF+DKPKPK  LYPETE+KLFVGNLSW+VTS+SL + FQEYGNV+G
Sbjct: 171 NLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIG 230

Query: 181 ARVLFDGETGRSRGYGFVSFPTKSEMEAALQ 273
           ARVL+DGETGRSRGYGFV + TK+EM+ AL+
Sbjct: 231 ARVLYDGETGRSRGYGFVCYSTKAEMDTALE 261


>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532218|gb|EEF34022.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 285

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/90 (81%), Positives = 82/90 (91%)
 Frame = +1

Query: 1   NLDGSVYGGRTLRVNFADKPKPKEALYPETEHKLFVGNLSWTVTSDSLTKAFQEYGNVVG 180
           NLDGS + GR LRVNF+DKPKPKE LYPETEHKLFVGNLSW+VTS+SL +AFQEYGN+VG
Sbjct: 173 NLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVG 232

Query: 181 ARVLFDGETGRSRGYGFVSFPTKSEMEAAL 270
           ARVL+DGETGRSRGYGFV + T+SEME AL
Sbjct: 233 ARVLYDGETGRSRGYGFVCYATRSEMENAL 262


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