BLASTX nr result

ID: Bupleurum21_contig00002486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002486
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Gly...   224   2e-56
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi...   216   3e-54
ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Gly...   213   4e-53
ref|XP_002527835.1| Auxin response factor, putative [Ricinus com...   213   4e-53
gb|ACX68650.3| auxin response factor [Dimocarpus longan]              213   5e-53

>ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 674

 Score =  224 bits (570), Expect = 2e-56
 Identities = 117/205 (57%), Positives = 137/205 (66%), Gaps = 2/205 (0%)
 Frame = +1

Query: 31   GNGYRLFGIELXXXXXXXXXXXXXXXXXX--NNLPLPYLEEESDQHSEPSNANQSDFPSV 204
            GNG RLFGI+L                    ++  +P L+ ESDQHSEPSNAN+SD PSV
Sbjct: 470  GNGCRLFGIQLLENSNAEGNLQTVTLSGRVGDDRSVPSLDAESDQHSEPSNANRSDIPSV 529

Query: 205  SCKPDKSCLQIQHESNSKQIRSCTKVHMQGIAVGRAVDLTRFNKYDDLLRKLEDMFEIKG 384
            SC  +KSCLQ   ES SKQIRSCTKVHMQG+AVGRAVDLTRF+ Y+DLLRKLEDMF IK 
Sbjct: 530  SCDAEKSCLQSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFNIKT 589

Query: 385  ELCGSEKKWQVVYTXXXXXXXXXXXXPWHEFCNMVRKICIYTTEEANRLTPKIKLHADEK 564
            ELCGS KKWQVVYT            PW EFC++VRKI IYT EE  +L+PKI+L  +EK
Sbjct: 590  ELCGSLKKWQVVYTDNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKLSPKIRLPMNEK 649

Query: 565  CGPVKTVSDSDIGTEEQLSNASSGC 639
              P K  S++ +  E+Q SN    C
Sbjct: 650  VNPSKQDSEAIVNPEDQSSNMGPSC 674


>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
            gi|297739458|emb|CBI29640.3| unnamed protein product
            [Vitis vinifera]
          Length = 678

 Score =  216 bits (551), Expect = 3e-54
 Identities = 119/216 (55%), Positives = 142/216 (65%), Gaps = 3/216 (1%)
 Frame = +1

Query: 1    VNKSIVEKK--PGNGYRLFGIELXXXXXXXXXXXXXXXXXXNNLPLPYLEEESDQHSEPS 174
            VNK   EK+   G+G RLFG +L                   + P+P L+ ESDQHSEPS
Sbjct: 465  VNKESGEKRRDTGSGCRLFGFQLLDNSTLEETLPVLTVG--EDQPVPSLDVESDQHSEPS 522

Query: 175  NANQSDFPSVSCKPDKSCLQIQHESNSKQIRSCTKVHMQGIAVGRAVDLTRFNKYDDLLR 354
            N N+SD PSVSC+PDK  L+   ES S+QIRSCTKVHMQGIAVGRAVDLTRF++Y+DLL+
Sbjct: 523  NINRSDIPSVSCEPDKLSLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYEDLLK 582

Query: 355  KLEDMFEIKGELCGSEKKWQVVYTXXXXXXXXXXXXPWHEFCNMVRKICIYTTEEANRLT 534
            KLE+MF+I+GELCG    WQVVYT            PW EFC+MVRKI IYT EE  RL+
Sbjct: 583  KLEEMFDIQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLS 642

Query: 535  PKIKLHADEKCGPVKTVSDSDI-GTEEQLSNASSGC 639
            PKIKL A E+  P K  SD  + GT++Q S    GC
Sbjct: 643  PKIKLPAMEEIKPGKLDSDVAVAGTDDQSSVVGPGC 678


>ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  213 bits (542), Expect = 4e-53
 Identities = 116/216 (53%), Positives = 138/216 (63%), Gaps = 5/216 (2%)
 Frame = +1

Query: 7    KSIVEKKPG--NGYRLFGIELXXXXXXXXXXXXXXXXXX---NNLPLPYLEEESDQHSEP 171
            K   EK+ G  NG RLF I+L                     ++ PLP L+ ESDQHSEP
Sbjct: 450  KEFGEKRQGTANGCRLFRIQLHDNSNSNEESLPMVTLSGRMGDDGPLPSLDAESDQHSEP 509

Query: 172  SNANQSDFPSVSCKPDKSCLQIQHESNSKQIRSCTKVHMQGIAVGRAVDLTRFNKYDDLL 351
            SN N+SD PSVSC  +KSCL+   ES S+QIRSCTKVHMQG+AVGRAVDLTRF+ Y+DLL
Sbjct: 510  SNVNRSDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLL 569

Query: 352  RKLEDMFEIKGELCGSEKKWQVVYTXXXXXXXXXXXXPWHEFCNMVRKICIYTTEEANRL 531
            RKLE+MF+I GELCGS KKWQVVYT            PW EFC++VRKI IYT EE  +L
Sbjct: 570  RKLEEMFDITGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVRKL 629

Query: 532  TPKIKLHADEKCGPVKTVSDSDIGTEEQLSNASSGC 639
            +PKI L   E+  P K  S++    E+Q S    GC
Sbjct: 630  SPKIGLPISEEVKPSKMDSEAVANPEDQSSIVGPGC 665


>ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
            gi|223532759|gb|EEF34538.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 671

 Score =  213 bits (542), Expect = 4e-53
 Identities = 111/207 (53%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
 Frame = +1

Query: 31   GNGYRLFGIELXXXXXXXXXXXXXXXXXX--NNLPLPYLEEESDQHSEPSNANQSDFPSV 204
            GNGYRLFGI+L                    ++ P+   + ESDQHSEPSN N+S+ PS+
Sbjct: 465  GNGYRLFGIQLVGNSNAEETSPLITTSGMVGDDRPVVSFDAESDQHSEPSNINRSEIPSI 524

Query: 205  SCKPDKSCLQIQHESNSKQIRSCTKVHMQGIAVGRAVDLTRFNKYDDLLRKLEDMFEIKG 384
            SC+P+KSCL+   E  S+QIRSCTKVHMQGIAVGRAVDLTRF  Y+DLLRKLE+MF+I+G
Sbjct: 525  SCEPEKSCLRSPQELQSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEG 584

Query: 385  ELCGSEKKWQVVYTXXXXXXXXXXXXPWHEFCNMVRKICIYTTEEANRLTPKIKLHADEK 564
            EL G  KKWQVVYT            PWHEFC+MVRKI IYT+EE  RL+PK KL  +E+
Sbjct: 585  ELSGFSKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKSKLPVNEE 644

Query: 565  CGPVKTVSDSD--IGTEEQLSNASSGC 639
                K   D D  +  E++ S    GC
Sbjct: 645  IKAAKADDDVDTTVNMEDRSSIVGPGC 671


>gb|ACX68650.3| auxin response factor [Dimocarpus longan]
          Length = 681

 Score =  213 bits (541), Expect = 5e-53
 Identities = 113/217 (52%), Positives = 142/217 (65%), Gaps = 4/217 (1%)
 Frame = +1

Query: 1    VNKSIVEKKPGNG--YRLFGIELXXXXXXXXXXXXXXXXXX--NNLPLPYLEEESDQHSE 168
            V+K   EK+ G G  Y+LFGI+L                    ++ P+P L+ +S+QHSE
Sbjct: 470  VSKESSEKRQGTGNTYKLFGIQLVDNSNIEESSAAVTMSATVGDDRPVPSLDADSEQHSE 529

Query: 169  PSNANQSDFPSVSCKPDKSCLQIQHESNSKQIRSCTKVHMQGIAVGRAVDLTRFNKYDDL 348
            PSN      PSVSC  +KSCL+   ES S+QIRSCTKVHMQGIAVGRAVDLTRF++YDDL
Sbjct: 530  PSN-----IPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDL 584

Query: 349  LRKLEDMFEIKGELCGSEKKWQVVYTXXXXXXXXXXXXPWHEFCNMVRKICIYTTEEANR 528
            L++LE+MF+I GEL G+ KKWQVVYT            PWHEFC+MVRKI IYT EE  R
Sbjct: 585  LKRLEEMFDIGGELSGATKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAEEVKR 644

Query: 529  LTPKIKLHADEKCGPVKTVSDSDIGTEEQLSNASSGC 639
            L+PKIKL ++E+  P K   D+ +  E++LS    GC
Sbjct: 645  LSPKIKLTSNEEVKPAKPDVDTAVNAEDRLSVVGHGC 681


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