BLASTX nr result

ID: Bupleurum21_contig00002474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002474
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT21542.1| spermidine synthase [Panax ginseng]                    245   3e-63
gb|AFH96952.1| spermidine synthase [Eleutherococcus senticosus]       241   4e-62
sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=...   240   8e-62
ref|XP_004135237.1| PREDICTED: spermidine synthase-like [Cucumis...   237   6e-61
sp|Q96556.1|SPD1_DATST RecName: Full=Spermidine synthase 1; Shor...   237   8e-61

>gb|ACT21542.1| spermidine synthase [Panax ginseng]
          Length = 333

 Score =  245 bits (625), Expect = 3e-63
 Identities = 117/120 (97%), Positives = 120/120 (100%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVGY+DPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF
Sbjct: 158 VSKQFFPDVAVGYDDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 217

Query: 183 KSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 362
           +SVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM
Sbjct: 218 QSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 277


>gb|AFH96952.1| spermidine synthase [Eleutherococcus senticosus]
          Length = 333

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/120 (95%), Positives = 118/120 (98%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVGYEDPRVK+HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF
Sbjct: 158 VSKQFFPDVAVGYEDPRVKVHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 217

Query: 183 KSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 362
             VSKALRPGGVVCTQAESIWLHMHIIEDIV+NCRQIFKGSVNYAWTTVPTYPSGVIGFM
Sbjct: 218 SLVSKALRPGGVVCTQAESIWLHMHIIEDIVSNCRQIFKGSVNYAWTTVPTYPSGVIGFM 277


>sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase; Short=SPDSY; AltName:
           Full=Putrescine aminopropyltransferase
           gi|3242659|dbj|BAA29033.1| spermidine synthase [Coffea
           arabica]
          Length = 316

 Score =  240 bits (613), Expect = 8e-62
 Identities = 114/120 (95%), Positives = 119/120 (99%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP+VAVG+EDPRV LHIGDGVAFLKAVPEGTYDA+IVDSSDPIGPAQELFEKPFF
Sbjct: 139 VSKQFFPDVAVGFEDPRVVLHIGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQELFEKPFF 198

Query: 183 KSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 362
           +SV+KALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM
Sbjct: 199 ESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 258


>ref|XP_004135237.1| PREDICTED: spermidine synthase-like [Cucumis sativus]
           gi|449478562|ref|XP_004155353.1| PREDICTED: spermidine
           synthase-like [Cucumis sativus]
          Length = 317

 Score =  237 bits (605), Expect = 6e-61
 Identities = 111/120 (92%), Positives = 116/120 (96%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSK+FFP VA+GYEDPRV LH+GDGVAFLKAVPEGTYDA+IVDSSDPIGPAQELFEKPFF
Sbjct: 143 VSKEFFPRVAIGYEDPRVTLHVGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQELFEKPFF 202

Query: 183 KSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 362
            SV+KALRPGGVVCTQAESIWLHMHIIEDIV NCRQIFKGSVNYAWTTVPTYPSGVIGFM
Sbjct: 203 ASVAKALRPGGVVCTQAESIWLHMHIIEDIVTNCRQIFKGSVNYAWTTVPTYPSGVIGFM 262


>sp|Q96556.1|SPD1_DATST RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName:
           Full=Putrescine aminopropyltransferase 1
           gi|1561577|emb|CAA69420.1| spermidine synthase 1 [Datura
           stramonium]
          Length = 308

 Score =  237 bits (604), Expect = 8e-61
 Identities = 112/120 (93%), Positives = 117/120 (97%)
 Frame = +3

Query: 3   VSKQFFPEVAVGYEDPRVKLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFF 182
           VSKQFFP VA+GYEDPRVKLH+GDGVAFLK V EGTYDAVIVDSSDPIGPAQELFEKPFF
Sbjct: 131 VSKQFFPNVAIGYEDPRVKLHVGDGVAFLKFVAEGTYDAVIVDSSDPIGPAQELFEKPFF 190

Query: 183 KSVSKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 362
           +SV++ALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM
Sbjct: 191 ESVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGVIGFM 250


Top